RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 CCDC90BQ9GZT6 254 aa11.12□□□□□ -0.63
SPTBN1-201ENST00000333896 DPH5Q9H2P9 285 aa11.12□□□□□ -0.63
SPTBN1-201ENST00000333896 STMN3Q9NZ72 180 aa11.12□□□□□ -0.63
SPTBN1-201ENST00000333896 PRXQ9BXM0 1461 aa11.12□□□□□ -0.63
SPTBN1-201ENST00000333896 TPD52L2O43399 206 aaKnown RBP11.12□□□□□ -0.63
SPTBN1-201ENST00000333896 FAM167BQ9BTA0 163 aa11.12□□□□□ -0.63
SPTBN1-201ENST00000333896 TRPC7Q9HCX4 862 aa11.12□□□□□ -0.63
SPTBN1-201ENST00000333896 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.12□□□□□ -0.63
SPTBN1-201ENST00000333896 STX18Q9P2W9 335 aaKnown RBP11.12□□□□□ -0.63
SPTBN1-201ENST00000333896 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.12□□□□□ -0.635e-7■□□□□ 9.4
SPTBN1-201ENST00000333896 SEMA3EO15041 775 aa11.12□□□□□ -0.63
SPTBN1-201ENST00000333896 CMA1P23946 247 aa11.12□□□□□ -0.63
SPTBN1-201ENST00000333896 GLT8D2Q9H1C3 349 aa11.12□□□□□ -0.63
SPTBN1-201ENST00000333896 DBF4Q9UBU7 674 aaPredicted RBP11.12□□□□□ -0.63
SPTBN1-201ENST00000333896 PDCLQ13371 301 aa11.12□□□□□ -0.63
SPTBN1-201ENST00000333896 PRPSAP1Q14558 356 aa11.12□□□□□ -0.63
SPTBN1-201ENST00000333896 IL17RAQ96F46 866 aa11.12□□□□□ -0.63
SPTBN1-201ENST00000333896 HINFPQ9BQA5 517 aa11.12□□□□□ -0.63
SPTBN1-201ENST00000333896 ETNK1Q9HBU6 452 aa11.12□□□□□ -0.63
SPTBN1-201ENST00000333896 ARL2BPQ9Y2Y0 163 aa11.12□□□□□ -0.63
SPTBN1-201ENST00000333896 ABL1P00519 1130 aa11.11□□□□□ -0.63
SPTBN1-201ENST00000333896 RRAGAQ7L523 313 aa11.11□□□□□ -0.63
SPTBN1-201ENST00000333896 NANOGNBQ7Z5D8 188 aa11.11□□□□□ -0.63
SPTBN1-201ENST00000333896 BHMTQ93088 406 aa11.11□□□□□ -0.63
SPTBN1-201ENST00000333896 CCT8L2Q96SF2 557 aa11.11□□□□□ -0.63
SPTBN1-201ENST00000333896 METTL14Q9HCE5 456 aaKnown RBP11.11□□□□□ -0.63
SPTBN1-201ENST00000333896 GINS2Q9Y248 185 aa11.11□□□□□ -0.63
SPTBN1-201ENST00000333896 SUPT3HO75486 399 aa11.11□□□□□ -0.63
SPTBN1-201ENST00000333896 RINT1Q6NUQ1 792 aa11.11□□□□□ -0.63
SPTBN1-201ENST00000333896 ZFRQ96KR1 1074 aaKnown RBP11.11□□□□□ -0.63
SPTBN1-201ENST00000333896 MED10Q9BTT4 135 aa11.11□□□□□ -0.63
SPTBN1-201ENST00000333896 RSPH10B2B2RC85 870 aa11.11□□□□□ -0.63
SPTBN1-201ENST00000333896 RSPH10BP0C881 870 aa11.11□□□□□ -0.63
SPTBN1-201ENST00000333896 MLH1P40692 756 aa11.11□□□□□ -0.63
SPTBN1-201ENST00000333896 RASGRF1Q13972 1273 aa11.11□□□□□ -0.63
SPTBN1-201ENST00000333896 TAB3Q8N5C8 712 aaPredicted RBP11.11□□□□□ -0.63
SPTBN1-201ENST00000333896 TRPC6Q9Y210 931 aa11.11□□□□□ -0.63
SPTBN1-201ENST00000333896 PPP1R37O75864 691 aa11.11□□□□□ -0.63
SPTBN1-201ENST00000333896 KCNA1Q09470 495 aa11.11□□□□□ -0.63
SPTBN1-201ENST00000333896 SZRD1Q7Z422 152 aa11.11□□□□□ -0.63
SPTBN1-201ENST00000333896 ST7Q9NRC1 585 aa11.11□□□□□ -0.63
SPTBN1-201ENST00000333896 BTBD7Q9P203 1132 aa11.11□□□□□ -0.63
SPTBN1-201ENST00000333896 SGK1O00141 431 aa11.11□□□□□ -0.63
SPTBN1-201ENST00000333896 BUB1O43683 1085 aa11.11□□□□□ -0.63
SPTBN1-201ENST00000333896 GNAT1P11488 350 aa11.11□□□□□ -0.63
SPTBN1-201ENST00000333896 CDC37L1Q7L3B6 337 aa11.11□□□□□ -0.63
SPTBN1-201ENST00000333896 TNIP2Q8NFZ5 429 aa11.11□□□□□ -0.63
SPTBN1-201ENST00000333896 NAF1Q96HR8 494 aaKnown RBP11.11□□□□□ -0.63
SPTBN1-201ENST00000333896 BRD8Q9H0E9 1235 aa11.11□□□□□ -0.63
SPTBN1-201ENST00000333896 TRPV6Q9H1D0 765 aa11.11□□□□□ -0.63
SPTBN1-201ENST00000333896 RAD21L1Q9H4I0 556 aa11.11□□□□□ -0.63
SPTBN1-201ENST00000333896 PLAAQ9Y263 795 aa11.11□□□□□ -0.63
SPTBN1-201ENST00000333896 PITPNM2Q9BZ72 1349 aa11.11□□□□□ -0.63
SPTBN1-201ENST00000333896 NPC1L1Q9UHC9 1359 aa11.11□□□□□ -0.63
SPTBN1-201ENST00000333896 MAGEB6P1A0A0J9YX57 407 aa11.11□□□□□ -0.63
SPTBN1-201ENST00000333896 QKIQ96PU8 341 aaKnown RBP eCLIP11.11□□□□□ -0.638e-7■■■■□ 24.3
SPTBN1-201ENST00000333896 PRDM11Q9NQV5 511 aa11.11□□□□□ -0.63
SPTBN1-201ENST00000333896 MID2Q9UJV3 735 aa11.11□□□□□ -0.63
SPTBN1-201ENST00000333896 TRAPPC10P48553 1259 aa11.11□□□□□ -0.63
SPTBN1-201ENST00000333896 ADCY1Q08828 1119 aa11.11□□□□□ -0.63
SPTBN1-201ENST00000333896 CDC26Q8NHZ8 85 aa11.11□□□□□ -0.63
SPTBN1-201ENST00000333896 KRT39Q6A163 491 aa11.1□□□□□ -0.63
SPTBN1-201ENST00000333896 CATSPER3Q86XQ3 398 aa11.1□□□□□ -0.63
SPTBN1-201ENST00000333896 ATP8A1Q9Y2Q0 1164 aa11.1□□□□□ -0.63
SPTBN1-201ENST00000333896 NOP56O00567 594 aaKnown RBP11.1□□□□□ -0.63
SPTBN1-201ENST00000333896 CCDC22O60826 627 aa11.1□□□□□ -0.63
SPTBN1-201ENST00000333896 CAPRIN1Q14444 709 aaKnown RBP11.1□□□□□ -0.63
SPTBN1-201ENST00000333896 NCAPH2Q6IBW4 605 aa11.1□□□□□ -0.63
SPTBN1-201ENST00000333896 CYB5D1Q6P9G0 228 aa11.1□□□□□ -0.63
SPTBN1-201ENST00000333896 TMEM87BQ96K49 555 aa11.1□□□□□ -0.63
SPTBN1-201ENST00000333896 SLC38A10Q9HBR0 1119 aa11.1□□□□□ -0.63
SPTBN1-201ENST00000333896 GAPVD1Q14C86 1478 aa11.1□□□□□ -0.63
SPTBN1-201ENST00000333896 NBPF26B4DH59 902 aa11.1□□□□□ -0.63
SPTBN1-201ENST00000333896 DCTN2Q13561 401 aaKnown RBP11.1□□□□□ -0.63
SPTBN1-201ENST00000333896 ITIH4Q14624 930 aa11.1□□□□□ -0.63
SPTBN1-201ENST00000333896 KIF19Q2TAC6 998 aa11.1□□□□□ -0.63
SPTBN1-201ENST00000333896 NBPF15Q8N660 670 aa11.1□□□□□ -0.63
SPTBN1-201ENST00000333896 PHACTR3Q96KR7 559 aa11.1□□□□□ -0.63
SPTBN1-201ENST00000333896 FAM25AB3EWG3 89 aa11.1□□□□□ -0.63
SPTBN1-201ENST00000333896 FAM25CB3EWG5 89 aa11.1□□□□□ -0.63
SPTBN1-201ENST00000333896 FAM25GB3EWG6 89 aa11.1□□□□□ -0.63
SPTBN1-201ENST00000333896 SASH1O94885 1247 aa11.1□□□□□ -0.63
SPTBN1-201ENST00000333896 LSP1P33241 339 aa11.1□□□□□ -0.63
SPTBN1-201ENST00000333896 KPNA2P52292 529 aaKnown RBP11.1□□□□□ -0.63
SPTBN1-201ENST00000333896 GRIN1Q05586 938 aa11.1□□□□□ -0.63
SPTBN1-201ENST00000333896 SBNO1A3KN83 1393 aa11.1□□□□□ -0.63
SPTBN1-201ENST00000333896 CBFA2T3O75081 653 aa11.1□□□□□ -0.63
SPTBN1-201ENST00000333896 TOM1L1O75674 476 aa11.1□□□□□ -0.63
SPTBN1-201ENST00000333896 CD19P15391 556 aa11.1□□□□□ -0.63
SPTBN1-201ENST00000333896 STAT1P42224 750 aa11.1□□□□□ -0.63
SPTBN1-201ENST00000333896 TMC5Q6UXY8 1006 aa11.1□□□□□ -0.63
SPTBN1-201ENST00000333896 TXNDC2Q86VQ3 553 aa11.1□□□□□ -0.63
SPTBN1-201ENST00000333896 ATP11CQ8NB49 1132 aa11.1□□□□□ -0.63
SPTBN1-201ENST00000333896 HIPK4Q8NE63 616 aa11.1□□□□□ -0.63
SPTBN1-201ENST00000333896 ST13P5Q8NFI4 369 aaPredicted RBP11.1□□□□□ -0.63
SPTBN1-201ENST00000333896 SMYD3Q9H7B4 428 aa11.1□□□□□ -0.63
SPTBN1-201ENST00000333896 PPCSQ9HAB8 311 aa11.1□□□□□ -0.63
SPTBN1-201ENST00000333896 TEX14Q8IWB6 1497 aa11.1□□□□□ -0.63
SPTBN1-201ENST00000333896 SYNGAP1Q96PV0 1343 aa11.1□□□□□ -0.63
SPTBN1-201ENST00000333896 DNAL1Q4LDG9 190 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 180.4 ms