RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 CCDC40Q4G0X9 1142 aa13.61□□□□□ -0.23
VPS33B-201ENST00000333371 DPP8Q6V1X1 898 aaPredicted RBP13.61□□□□□ -0.23
VPS33B-201ENST00000333371 HAS1Q92839 578 aa13.61□□□□□ -0.23
VPS33B-201ENST00000333371 ARL8AQ96BM9 186 aa13.61□□□□□ -0.23
VPS33B-201ENST00000333371 DNAJC19Q96DA6 116 aa13.61□□□□□ -0.23
VPS33B-201ENST00000333371 PACSIN1Q9BY11 444 aa13.61□□□□□ -0.23
VPS33B-201ENST00000333371 STK17AQ9UEE5 414 aa13.61□□□□□ -0.23
VPS33B-201ENST00000333371 APBA3O96018 575 aa13.61□□□□□ -0.23
VPS33B-201ENST00000333371 EHHADHQ08426 723 aa13.61□□□□□ -0.23
VPS33B-201ENST00000333371 COBLL1Q53SF7 1204 aa13.61□□□□□ -0.23
VPS33B-201ENST00000333371 CCDC84Q86UT8 332 aaPredicted RBP13.61□□□□□ -0.23
VPS33B-201ENST00000333371 FAM76AQ8TAV0 307 aa13.61□□□□□ -0.23
VPS33B-201ENST00000333371 ALS2CR12Q96Q35 445 aa13.61□□□□□ -0.23
VPS33B-201ENST00000333371 LSM14BQ9BX40 385 aaKnown RBP13.61□□□□□ -0.23
VPS33B-201ENST00000333371 FAM170AA1A519 330 aa13.6□□□□□ -0.23
VPS33B-201ENST00000333371 KLRG2A4D1S0 409 aaPredicted RBP13.6□□□□□ -0.23
VPS33B-201ENST00000333371 G3V3G9 751 aa13.6□□□□□ -0.23
VPS33B-201ENST00000333371 GLI1P08151 1106 aa13.6□□□□□ -0.23
VPS33B-201ENST00000333371 PPP1R2P41236 205 aa13.6□□□□□ -0.23
VPS33B-201ENST00000333371 DCAF8Q5TAQ9 597 aa13.6□□□□□ -0.23
VPS33B-201ENST00000333371 IQCEQ6IPM2 695 aa13.6□□□□□ -0.23
VPS33B-201ENST00000333371 ZC3H12CQ9C0D7 883 aaKnown RBP13.6□□□□□ -0.23
VPS33B-201ENST00000333371 GOLPH3Q9H4A6 298 aa13.6□□□□□ -0.23
VPS33B-201ENST00000333371 MTMR4Q9NYA4 1195 aa13.6□□□□□ -0.23
VPS33B-201ENST00000333371 ATP6V0A2Q9Y487 856 aa13.6□□□□□ -0.23
VPS33B-201ENST00000333371 RAD21O60216 631 aa13.6□□□□□ -0.23
VPS33B-201ENST00000333371 FAM153BP0C7A2 387 aa13.6□□□□□ -0.23
VPS33B-201ENST00000333371 KLRC1P26715 233 aa13.6□□□□□ -0.23
VPS33B-201ENST00000333371 LRRC63Q05C16 580 aa13.6□□□□□ -0.23
VPS33B-201ENST00000333371 FAM153CQ494X1 144 aa13.6□□□□□ -0.23
VPS33B-201ENST00000333371 FAM83BQ5T0W9 1011 aa13.6□□□□□ -0.23
VPS33B-201ENST00000333371 KCTD16Q68DU8 428 aa13.6□□□□□ -0.23
VPS33B-201ENST00000333371 CCDC70Q6NSX1 233 aa13.6□□□□□ -0.23
VPS33B-201ENST00000333371 KCTD1Q719H9 257 aa13.6□□□□□ -0.23
VPS33B-201ENST00000333371 COL23A1Q86Y22 540 aaPredicted RBP13.6□□□□□ -0.23
VPS33B-201ENST00000333371 MYOCDQ8IZQ8 938 aa13.6□□□□□ -0.23
VPS33B-201ENST00000333371 SH2D3CQ8N5H7 860 aa13.6□□□□□ -0.23
VPS33B-201ENST00000333371 JMJD4Q9H9V9 463 aa13.6□□□□□ -0.23
VPS33B-201ENST00000333371 STIM2Q9P246 746 aa13.6□□□□□ -0.23
VPS33B-201ENST00000333371 FAM153AQ9UHL3 310 aa13.6□□□□□ -0.23
VPS33B-201ENST00000333371 ANKRD31Q8N7Z5 1873 aa13.6□□□□□ -0.23
VPS33B-201ENST00000333371 MARCH6O60337 910 aa13.6□□□□□ -0.23
VPS33B-201ENST00000333371 PPFIA4O75335 1185 aa13.6□□□□□ -0.23
VPS33B-201ENST00000333371 PALMO75781 387 aa13.6□□□□□ -0.23
VPS33B-201ENST00000333371 CARSP49589 748 aaKnown RBP13.6□□□□□ -0.23
VPS33B-201ENST00000333371 TMEM119Q4V9L6 283 aa13.6□□□□□ -0.23
VPS33B-201ENST00000333371 C8orf74Q6P047 294 aa13.6□□□□□ -0.23
VPS33B-201ENST00000333371 ADGRF4Q8IZF3 695 aa13.6□□□□□ -0.23
VPS33B-201ENST00000333371 PROCA1Q8NCQ7 364 aaPredicted RBP13.6□□□□□ -0.23
VPS33B-201ENST00000333371 TBC1D5Q92609 795 aa13.6□□□□□ -0.23
VPS33B-201ENST00000333371 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.6□□□□□ -0.23
VPS33B-201ENST00000333371 MXD3Q9BW11 206 aa13.6□□□□□ -0.23
VPS33B-201ENST00000333371 COA1Q9GZY4 146 aa13.6□□□□□ -0.23
VPS33B-201ENST00000333371 ZHX3Q9H4I2 956 aa13.6□□□□□ -0.23
VPS33B-201ENST00000333371 PANK4Q9NVE7 773 aa13.6□□□□□ -0.23
VPS33B-201ENST00000333371 DDX25Q9UHL0 483 aaKnown RBP13.6□□□□□ -0.23
VPS33B-201ENST00000333371 COL4A3BPQ9Y5P4 624 aa13.6□□□□□ -0.23
VPS33B-201ENST00000333371 ESYT2A0FGR8 921 aa13.59□□□□□ -0.23
VPS33B-201ENST00000333371 POTEB3A0JP26 581 aa13.59□□□□□ -0.23
VPS33B-201ENST00000333371 LRRC37AA6NMS7 1700 aa13.59□□□□□ -0.23
VPS33B-201ENST00000333371 POTECB2RU33 542 aa13.59□□□□□ -0.23
VPS33B-201ENST00000333371 NPR1P16066 1061 aa13.59□□□□□ -0.23
VPS33B-201ENST00000333371 TCP1P17987 556 aaKnown RBP13.59□□□□□ -0.23
VPS33B-201ENST00000333371 STAT3P40763 770 aa13.59□□□□□ -0.23
VPS33B-201ENST00000333371 ZCWPW2Q504Y3 356 aa13.59□□□□□ -0.23
VPS33B-201ENST00000333371 TTMPQ5BVD1 217 aa13.59□□□□□ -0.23
VPS33B-201ENST00000333371 FAM26FQ5R3K3 315 aa13.59□□□□□ -0.23
VPS33B-201ENST00000333371 POTEBQ6S5H4 581 aa13.59□□□□□ -0.23
VPS33B-201ENST00000333371 IFT81Q8WYA0 676 aa13.59□□□□□ -0.23
VPS33B-201ENST00000333371 DDX4Q9NQI0 724 aaKnown RBP13.59□□□□□ -0.23
VPS33B-201ENST00000333371 NFU1Q9UMS0 254 aa13.59□□□□□ -0.23
VPS33B-201ENST00000333371 KIAA1024Q9UPX6 916 aa13.59□□□□□ -0.23
VPS33B-201ENST00000333371 A0A087X0T9 212 aa13.59□□□□□ -0.23
VPS33B-201ENST00000333371 USP17L15C9J2P7 530 aa13.59□□□□□ -0.23
VPS33B-201ENST00000333371 USP17L10C9JJH3 530 aa13.59□□□□□ -0.23
VPS33B-201ENST00000333371 USP17L13C9JLJ4 530 aa13.59□□□□□ -0.23
VPS33B-201ENST00000333371 USP17L11C9JVI0 530 aa13.59□□□□□ -0.23
VPS33B-201ENST00000333371 USP17L18D6R9N7 530 aa13.59□□□□□ -0.23
VPS33B-201ENST00000333371 USP17L22D6RA61 530 aa13.59□□□□□ -0.23
VPS33B-201ENST00000333371 USP17L17D6RBQ6 530 aa13.59□□□□□ -0.23
VPS33B-201ENST00000333371 USP17L19D6RCP7 530 aa13.59□□□□□ -0.23
VPS33B-201ENST00000333371 USP17L20D6RJB6 530 aa13.59□□□□□ -0.23
VPS33B-201ENST00000333371 KRT14P02533 472 aa13.59□□□□□ -0.23
VPS33B-201ENST00000333371 FAM228BP0C875 321 aa13.59□□□□□ -0.23
VPS33B-201ENST00000333371 CCT5P48643 541 aa13.59□□□□□ -0.23
VPS33B-201ENST00000333371 IRAK1P51617 712 aa13.59□□□□□ -0.23
VPS33B-201ENST00000333371 USP17L24Q0WX57 530 aa13.59□□□□□ -0.23
VPS33B-201ENST00000333371 RAPGEF1Q13905 1077 aa13.59□□□□□ -0.23
VPS33B-201ENST00000333371 SHROOM1Q2M3G4 852 aaPredicted RBP13.59□□□□□ -0.23
VPS33B-201ENST00000333371 USP17L6PQ6QN14 398 aa13.59□□□□□ -0.23
VPS33B-201ENST00000333371 ZNF572Q7Z3I7 529 aaPredicted RBP13.59□□□□□ -0.23
VPS33B-201ENST00000333371 FAM133AQ8N9E0 248 aa13.59□□□□□ -0.23
VPS33B-201ENST00000333371 NOX5Q96PH1 765 aa13.59□□□□□ -0.23
VPS33B-201ENST00000333371 TSG101Q99816 390 aa13.59□□□□□ -0.23
VPS33B-201ENST00000333371 BCAS3Q9H6U6 928 aa13.59□□□□□ -0.23
VPS33B-201ENST00000333371 ADAMTS1Q9UHI8 967 aa13.59□□□□□ -0.23
VPS33B-201ENST00000333371 PJA2O43164 708 aa13.58□□□□□ -0.24
VPS33B-201ENST00000333371 ACTN1P12814 892 aa13.58□□□□□ -0.24
VPS33B-201ENST00000333371 ALDH1B1P30837 517 aa13.58□□□□□ -0.24
VPS33B-201ENST00000333371 PDE6BP35913 854 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms