RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 HSDL1Q3SXM5 330 aa29.43■■■□□ 2.3
SMDT1-201ENST00000331479 GNASQ5JWF2 1037 aa29.43■■■□□ 2.3
SMDT1-201ENST00000331479 CCSAPQ6IQ19 270 aaPredicted RBP29.43■■■□□ 2.3
SMDT1-201ENST00000331479 RNF180Q86T96 592 aa29.43■■■□□ 2.3
SMDT1-201ENST00000331479 ZNF577Q9BSK1 485 aa29.43■■■□□ 2.3
SMDT1-201ENST00000331479 MLXIPQ9HAP2 919 aa29.43■■■□□ 2.3
SMDT1-201ENST00000331479 RBM19Q9Y4C8 960 aaKnown RBP29.43■■■□□ 2.3
SMDT1-201ENST00000331479 IPO5O00410 1097 aaKnown RBP29.43■■■□□ 2.3
SMDT1-201ENST00000331479 METTL7BQ6UX53 244 aa29.43■■■□□ 2.3
SMDT1-201ENST00000331479 DNAH12Q6ZR08 3092 aa29.42■■■□□ 2.3
SMDT1-201ENST00000331479 DHX15O43143 795 aaKnown RBP29.42■■■□□ 2.3
SMDT1-201ENST00000331479 CST5P28325 142 aaPredicted RBP29.42■■■□□ 2.3
SMDT1-201ENST00000331479 RESTQ13127 1097 aa29.42■■■□□ 2.3
SMDT1-201ENST00000331479 POTEDQ86YR6 584 aa29.42■■■□□ 2.3
SMDT1-201ENST00000331479 SPATA33Q96N06 139 aa29.42■■■□□ 2.3
SMDT1-201ENST00000331479 NAP1L4Q99733 375 aaKnown RBP29.42■■■□□ 2.3
SMDT1-201ENST00000331479 A6NJR5 290 aa29.41■■■□□ 2.3
SMDT1-201ENST00000331479 DNM1LO00429 736 aa29.41■■■□□ 2.3
SMDT1-201ENST00000331479 KCNA10Q16322 511 aa29.41■■■□□ 2.3
SMDT1-201ENST00000331479 GIMAP8Q8ND71 665 aaPredicted RBP29.41■■■□□ 2.3
SMDT1-201ENST00000331479 ETNPPLQ8TBG4 499 aa29.41■■■□□ 2.3
SMDT1-201ENST00000331479 DIS3LQ8TF46 1054 aaKnown RBP29.41■■■□□ 2.3
SMDT1-201ENST00000331479 NOL7Q9UMY1 257 aaKnown RBP29.41■■■□□ 2.3
SMDT1-201ENST00000331479 NFASCO94856 1347 aa29.41■■■□□ 2.3
SMDT1-201ENST00000331479 MCM7P33993 719 aa29.4■■■□□ 2.3
SMDT1-201ENST00000331479 TRAPPC10P48553 1259 aa29.4■■■□□ 2.3
SMDT1-201ENST00000331479 SP4Q02446 784 aa29.4■■■□□ 2.3
SMDT1-201ENST00000331479 ZNF174Q15697 407 aa29.4■■■□□ 2.3
SMDT1-201ENST00000331479 TTC38Q5R3I4 469 aa29.4■■■□□ 2.3
SMDT1-201ENST00000331479 PPTC7Q8NI37 304 aa29.4■■■□□ 2.3
SMDT1-201ENST00000331479 SLC5A5Q92911 643 aa29.4■■■□□ 2.3
SMDT1-201ENST00000331479 DDX39AO00148 427 aaKnown RBP29.39■■■□□ 2.3
SMDT1-201ENST00000331479 MMP3P08254 477 aa29.39■■■□□ 2.3
SMDT1-201ENST00000331479 CPT1AP50416 773 aa29.39■■■□□ 2.3
SMDT1-201ENST00000331479 BRAPQ7Z569 592 aa29.39■■■□□ 2.3
SMDT1-201ENST00000331479 ANKLE1Q8NAG6 615 aa29.39■■■□□ 2.3
SMDT1-201ENST00000331479 SDF4Q9BRK5 362 aa29.39■■■□□ 2.3
SMDT1-201ENST00000331479 KCNMB3Q9NPA1 279 aa29.39■■■□□ 2.3
SMDT1-201ENST00000331479 PCDHB6Q9Y5E3 794 aa29.39■■■□□ 2.3
SMDT1-201ENST00000331479 FOXD4L5Q5VV16 416 aaPredicted RBP29.39■■■□□ 2.29
SMDT1-201ENST00000331479 FOXD4L4Q8WXT5 416 aaPredicted RBP29.39■■■□□ 2.29
SMDT1-201ENST00000331479 HAS1Q92839 578 aa29.39■■■□□ 2.29
SMDT1-201ENST00000331479 JPH1Q9HDC5 661 aaPredicted RBP29.39■■■□□ 2.29
SMDT1-201ENST00000331479 KBTBD13C9JR72 458 aa29.38■■■□□ 2.29
SMDT1-201ENST00000331479 ASGR1P07306 291 aa29.38■■■□□ 2.29
SMDT1-201ENST00000331479 CAPN2P17655 700 aa29.38■■■□□ 2.29
SMDT1-201ENST00000331479 GPR20Q99678 358 aa29.38■■■□□ 2.29
SMDT1-201ENST00000331479 TMEM60Q9H2L4 133 aa29.38■■■□□ 2.29
SMDT1-201ENST00000331479 TBC1D22BQ9NU19 505 aa29.38■■■□□ 2.29
SMDT1-201ENST00000331479 NEMFO60524 1076 aa29.37■■■□□ 2.29
SMDT1-201ENST00000331479 ACLYP53396 1101 aa29.37■■■□□ 2.29
SMDT1-201ENST00000331479 RILPL1Q5EBL4 403 aa29.37■■■□□ 2.29
SMDT1-201ENST00000331479 FAM173BQ6P4H8 233 aa29.37■■■□□ 2.29
SMDT1-201ENST00000331479 PCSK9Q8NBP7 692 aaKnown RBP29.37■■■□□ 2.29
SMDT1-201ENST00000331479 TSEN34Q9BSV6 310 aaKnown RBP29.37■■■□□ 2.29
SMDT1-201ENST00000331479 SLC9A2Q9UBY0 812 aa29.37■■■□□ 2.29
SMDT1-201ENST00000331479 CCNE2O96020 404 aa29.36■■■□□ 2.29
SMDT1-201ENST00000331479 PAWRQ96IZ0 340 aaKnown RBP29.36■■■□□ 2.29
SMDT1-201ENST00000331479 NOP56O00567 594 aaKnown RBP29.35■■■□□ 2.29
SMDT1-201ENST00000331479 PSMD10O75832 226 aa29.35■■■□□ 2.29
SMDT1-201ENST00000331479 ZSCAN22P10073 491 aaPredicted RBP29.35■■■□□ 2.29
SMDT1-201ENST00000331479 PDIA4P13667 645 aaKnown RBP29.35■■■□□ 2.29
SMDT1-201ENST00000331479 CALCRLQ16602 461 aa29.35■■■□□ 2.29
SMDT1-201ENST00000331479 BRDTQ58F21 947 aaPredicted RBP29.35■■■□□ 2.29
SMDT1-201ENST00000331479 LRCH2Q5VUJ6 765 aa29.35■■■□□ 2.29
SMDT1-201ENST00000331479 CXCL17Q6UXB2 119 aa29.35■■■□□ 2.29
SMDT1-201ENST00000331479 UBE2Q1Q7Z7E8 422 aa29.35■■■□□ 2.29
SMDT1-201ENST00000331479 FERMT2Q96AC1 680 aa29.35■■■□□ 2.29
SMDT1-201ENST00000331479 RIT2Q99578 217 aa29.35■■■□□ 2.29
SMDT1-201ENST00000331479 PHF24Q9UPV7 400 aa29.35■■■□□ 2.29
SMDT1-201ENST00000331479 GSTTP1A0A1W2PQM5 241 aa29.35■■■□□ 2.29
SMDT1-201ENST00000331479 MYL3P08590 195 aa29.35■■■□□ 2.29
SMDT1-201ENST00000331479 HOXD8P13378 290 aaPredicted RBP29.35■■■□□ 2.29
SMDT1-201ENST00000331479 DGKDQ16760 1214 aa29.35■■■□□ 2.29
SMDT1-201ENST00000331479 FAM20AQ96MK3 541 aa29.35■■■□□ 2.29
SMDT1-201ENST00000331479 MTMR9Q96QG7 549 aa29.35■■■□□ 2.29
SMDT1-201ENST00000331479 ZSCAN16Q9H4T2 348 aaPredicted RBP29.35■■■□□ 2.29
SMDT1-201ENST00000331479 EIF4ENIF1Q9NRA8 985 aaKnown RBP29.35■■■□□ 2.29
SMDT1-201ENST00000331479 MOXD2PA6NHM9 499 aa29.34■■■□□ 2.29
SMDT1-201ENST00000331479 TBX3O15119 743 aa29.34■■■□□ 2.29
SMDT1-201ENST00000331479 ZEB2O60315 1214 aa29.34■■■□□ 2.29
SMDT1-201ENST00000331479 GAS7O60861 476 aa29.34■■■□□ 2.29
SMDT1-201ENST00000331479 PPFIA4O75335 1185 aa29.34■■■□□ 2.29
SMDT1-201ENST00000331479 COL6A1P12109 1028 aa29.34■■■□□ 2.29
SMDT1-201ENST00000331479 PURAQ00577 322 aaKnown RBP29.34■■■□□ 2.29
SMDT1-201ENST00000331479 C4orf32Q8N8J7 132 aa29.34■■■□□ 2.29
SMDT1-201ENST00000331479 ZDHHC9Q9Y397 364 aa29.34■■■□□ 2.29
SMDT1-201ENST00000331479 ACTR2P61160 394 aa29.33■■■□□ 2.29
SMDT1-201ENST00000331479 ORC2Q13416 577 aaPredicted RBP29.33■■■□□ 2.29
SMDT1-201ENST00000331479 TEKT3Q9BXF9 490 aa29.33■■■□□ 2.29
SMDT1-201ENST00000331479 SENP6Q9GZR1 1112 aaPredicted RBP29.33■■■□□ 2.29
SMDT1-201ENST00000331479 A0A1W2PQ45 241 aaPredicted RBP29.32■■■□□ 2.28
SMDT1-201ENST00000331479 A0A1W2PQY0 241 aa29.32■■■□□ 2.28
SMDT1-201ENST00000331479 MARCH6O60337 910 aa29.32■■■□□ 2.28
SMDT1-201ENST00000331479 F13A1P00488 732 aa29.32■■■□□ 2.28
SMDT1-201ENST00000331479 ZNF286BP0CG31 522 aa29.32■■■□□ 2.28
SMDT1-201ENST00000331479 DDIT3P35638 169 aa29.32■■■□□ 2.28
SMDT1-201ENST00000331479 SEPT1Q8WYJ6 367 aa29.32■■■□□ 2.28
SMDT1-201ENST00000331479 UNC45AQ9H3U1 944 aa29.32■■■□□ 2.28
SMDT1-201ENST00000331479 POLR3EQ9NVU0 708 aa29.32■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms