RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 HECW2Q9P2P5 1572 aa15.28■□□□□ 0.04
EPHB3-201ENST00000330394 PPRC1Q5VV67 1664 aaKnown RBP15.28■□□□□ 0.04
EPHB3-201ENST00000330394 ARHGAP42A6NI28 874 aa15.28■□□□□ 0.04
EPHB3-201ENST00000330394 GNPTABQ3T906 1256 aa15.28■□□□□ 0.04
EPHB3-201ENST00000330394 CCDC93Q567U6 631 aa15.28■□□□□ 0.04
EPHB3-201ENST00000330394 SDCCAG8Q86SQ7 713 aaPredicted RBP15.28■□□□□ 0.04
EPHB3-201ENST00000330394 CNOT10Q9H9A5 744 aaKnown RBP15.28■□□□□ 0.04
EPHB3-201ENST00000330394 RIC8AQ9NPQ8 531 aa15.28■□□□□ 0.04
EPHB3-201ENST00000330394 PTPRMP28827 1452 aa15.28■□□□□ 0.04
EPHB3-201ENST00000330394 OPHN1O60890 802 aa15.28■□□□□ 0.04
EPHB3-201ENST00000330394 PLEKP08567 350 aaPredicted RBP15.28■□□□□ 0.04
EPHB3-201ENST00000330394 DPYDQ12882 1025 aa15.28■□□□□ 0.04
EPHB3-201ENST00000330394 CUL1Q13616 776 aa15.28■□□□□ 0.04
EPHB3-201ENST00000330394 DCUN1D2Q6PH85 259 aa15.28■□□□□ 0.04
EPHB3-201ENST00000330394 FAM178BQ8IXR5 827 aa15.28■□□□□ 0.04
EPHB3-201ENST00000330394 RNPC3Q96LT9 517 aaKnown RBP15.28■□□□□ 0.04
EPHB3-201ENST00000330394 EPN3Q9H201 632 aa15.28■□□□□ 0.04
EPHB3-201ENST00000330394 TAF1DQ9H5J8 278 aaPredicted RBP15.28■□□□□ 0.04
EPHB3-201ENST00000330394 GCNT4Q9P109 453 aa15.28■□□□□ 0.04
EPHB3-201ENST00000330394 ELF1P32519 619 aa15.28■□□□□ 0.04
EPHB3-201ENST00000330394 SLC16A2P36021 539 aa15.28■□□□□ 0.04
EPHB3-201ENST00000330394 WDR78Q5VTH9 848 aa15.28■□□□□ 0.04
EPHB3-201ENST00000330394 MIPOL1Q8TD10 442 aa15.28■□□□□ 0.04
EPHB3-201ENST00000330394 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.28■□□□□ 0.04
EPHB3-201ENST00000330394 MAGEF1Q9HAY2 307 aa15.28■□□□□ 0.04
EPHB3-201ENST00000330394 AFPP02771 609 aaKnown RBP15.27■□□□□ 0.04
EPHB3-201ENST00000330394 KCNQ4P56696 695 aa15.27■□□□□ 0.04
EPHB3-201ENST00000330394 MSANTD4Q8NCY6 345 aa15.27■□□□□ 0.04
EPHB3-201ENST00000330394 CCDC87Q9NVE4 849 aa15.27■□□□□ 0.04
EPHB3-201ENST00000330394 BZW2Q9Y6E2 419 aaKnown RBP15.27■□□□□ 0.04
EPHB3-201ENST00000330394 DIXDC1Q155Q3 683 aa15.27■□□□□ 0.04
EPHB3-201ENST00000330394 CFAP157Q5JU67 520 aa15.27■□□□□ 0.04
EPHB3-201ENST00000330394 ILDR1Q86SU0 546 aaPredicted RBP15.27■□□□□ 0.04
EPHB3-201ENST00000330394 RUNDC3BQ96NL0 473 aa15.27■□□□□ 0.04
EPHB3-201ENST00000330394 TRIM4Q9C037 500 aa15.27■□□□□ 0.04
EPHB3-201ENST00000330394 ATP8A2Q9NTI2 1148 aa15.27■□□□□ 0.04
EPHB3-201ENST00000330394 TXNDC16Q9P2K2 825 aa15.27■□□□□ 0.04
EPHB3-201ENST00000330394 PRPF6O94906 941 aaKnown RBP15.27■□□□□ 0.03
EPHB3-201ENST00000330394 ATF2P15336 505 aa15.27■□□□□ 0.03
EPHB3-201ENST00000330394 MKRN4PQ13434 485 aaPredicted RBP15.27■□□□□ 0.03
EPHB3-201ENST00000330394 TMED2Q15363 201 aa15.27■□□□□ 0.03
EPHB3-201ENST00000330394 WDR44Q5JSH3 913 aa15.27■□□□□ 0.03
EPHB3-201ENST00000330394 AEBP2Q6ZN18 517 aaPredicted RBP15.27■□□□□ 0.03
EPHB3-201ENST00000330394 ZNF148Q9UQR1 794 aa15.27■□□□□ 0.03
EPHB3-201ENST00000330394 IQGAP1P46940 1657 aa15.27■□□□□ 0.03
EPHB3-201ENST00000330394 ENO4A6NNW6 628 aa15.26■□□□□ 0.03
EPHB3-201ENST00000330394 LUC7L3O95232 432 aaKnown RBP15.26■□□□□ 0.03
EPHB3-201ENST00000330394 UBE2SQ16763 222 aa15.26■□□□□ 0.03
EPHB3-201ENST00000330394 GALNT17Q6IS24 598 aa15.26■□□□□ 0.03
EPHB3-201ENST00000330394 SPATA24Q86W54 205 aa15.26■□□□□ 0.03
EPHB3-201ENST00000330394 SAAL1Q96ER3 474 aa15.26■□□□□ 0.03
EPHB3-201ENST00000330394 KDM3AQ9Y4C1 1321 aa15.26■□□□□ 0.03
EPHB3-201ENST00000330394 SFI1A8K8P3 1242 aa15.26■□□□□ 0.03
EPHB3-201ENST00000330394 MYL1P05976 194 aa15.26■□□□□ 0.03
EPHB3-201ENST00000330394 STK4Q13043 487 aa15.26■□□□□ 0.03
EPHB3-201ENST00000330394 RABL6Q3YEC7 729 aaPredicted RBP15.26■□□□□ 0.03
EPHB3-201ENST00000330394 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.26■□□□□ 0.03
EPHB3-201ENST00000330394 NAP1L4Q99733 375 aaKnown RBP15.26■□□□□ 0.03
EPHB3-201ENST00000330394 METTL14Q9HCE5 456 aaKnown RBP15.26■□□□□ 0.03
EPHB3-201ENST00000330394 TSPOAP1O95153 1857 aa15.26■□□□□ 0.03
EPHB3-201ENST00000330394 A0A1W2PQC6 194 aa15.26■□□□□ 0.03
EPHB3-201ENST00000330394 NBPF26B4DH59 902 aa15.26■□□□□ 0.03
EPHB3-201ENST00000330394 LAD1O00515 517 aa15.26■□□□□ 0.03
EPHB3-201ENST00000330394 ERFP50548 548 aa15.26■□□□□ 0.03
EPHB3-201ENST00000330394 ATP2C1P98194 919 aaPredicted RBP15.26■□□□□ 0.03
EPHB3-201ENST00000330394 IL9RQ01113 521 aa15.26■□□□□ 0.03
EPHB3-201ENST00000330394 NBPF10Q6P3W6 841 aaKnown RBP15.26■□□□□ 0.03
EPHB3-201ENST00000330394 ARHGAP24Q8N264 748 aa15.26■□□□□ 0.03
EPHB3-201ENST00000330394 NBPF15Q8N660 670 aa15.26■□□□□ 0.03
EPHB3-201ENST00000330394 DDX23Q9BUQ8 820 aaKnown RBP15.26■□□□□ 0.03
EPHB3-201ENST00000330394 AZI2Q9H6S1 392 aa15.26■□□□□ 0.03
EPHB3-201ENST00000330394 GNPATO15228 680 aa15.25■□□□□ 0.03
EPHB3-201ENST00000330394 DPP8Q6V1X1 898 aaPredicted RBP15.25■□□□□ 0.03
EPHB3-201ENST00000330394 HPSEQ9Y251 543 aa15.25■□□□□ 0.03
EPHB3-201ENST00000330394 PSMD14O00487 310 aa15.25■□□□□ 0.03
EPHB3-201ENST00000330394 SART1O43290 800 aaKnown RBP15.25■□□□□ 0.03
EPHB3-201ENST00000330394 RCN2Q14257 317 aa15.25■□□□□ 0.03
EPHB3-201ENST00000330394 CHMP6Q96FZ7 201 aa15.25■□□□□ 0.03
EPHB3-201ENST00000330394 NYXQ9GZU5 481 aa15.25■□□□□ 0.03
EPHB3-201ENST00000330394 MYO3AQ8NEV4 1616 aa15.25■□□□□ 0.03
EPHB3-201ENST00000330394 FERP16591 822 aa15.25■□□□□ 0.03
EPHB3-201ENST00000330394 PSMC4P43686 418 aa15.25■□□□□ 0.03
EPHB3-201ENST00000330394 SGO2Q562F6 1265 aa15.25■□□□□ 0.03
EPHB3-201ENST00000330394 PHLDB3Q6NSJ2 640 aa15.25■□□□□ 0.03
EPHB3-201ENST00000330394 FAM186BQ8IYM0 893 aa15.25■□□□□ 0.03
EPHB3-201ENST00000330394 ADSSL1Q8N142 457 aa15.25■□□□□ 0.03
EPHB3-201ENST00000330394 SLC44A5Q8NCS7 719 aa15.25■□□□□ 0.03
EPHB3-201ENST00000330394 PPP1R3GB7ZBB8 358 aa15.25■□□□□ 0.03
EPHB3-201ENST00000330394 EIF3BP55884 814 aaKnown RBP15.25■□□□□ 0.03
EPHB3-201ENST00000330394 LRRC63Q05C16 580 aa15.25■□□□□ 0.03
EPHB3-201ENST00000330394 BIRC2Q13490 618 aa15.25■□□□□ 0.03
EPHB3-201ENST00000330394 LIN9Q5TKA1 542 aa15.25■□□□□ 0.03
EPHB3-201ENST00000330394 CCDC110Q8TBZ0 833 aa15.25■□□□□ 0.03
EPHB3-201ENST00000330394 PCDHA1Q9Y5I3 950 aa15.25■□□□□ 0.03
EPHB3-201ENST00000330394 HEG1Q9ULI3 1381 aa15.25■□□□□ 0.03
EPHB3-201ENST00000330394 NBPF9Q3BBW0 867 aa15.24■□□□□ 0.03
EPHB3-201ENST00000330394 PDCD7Q8N8D1 485 aaKnown RBP15.24■□□□□ 0.03
EPHB3-201ENST00000330394 NGLY1Q96IV0 654 aa15.24■□□□□ 0.03
EPHB3-201ENST00000330394 VCX3BQ9H321 246 aa15.24■□□□□ 0.03
EPHB3-201ENST00000330394 STK17AQ9UEE5 414 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms