RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 KRT28Q7Z3Y7 464 aa14.03□□□□□ -0.16
CCDC60-201ENST00000327554 PROCA1Q8NCQ7 364 aaPredicted RBP14.03□□□□□ -0.16
CCDC60-201ENST00000327554 TCP11Q8WWU5 503 aa14.03□□□□□ -0.16
CCDC60-201ENST00000327554 SPDL1Q96EA4 605 aa14.03□□□□□ -0.16
CCDC60-201ENST00000327554 L3MBTL3Q96JM7 780 aaPredicted RBP14.03□□□□□ -0.16
CCDC60-201ENST00000327554 PSMD1Q99460 953 aa14.03□□□□□ -0.16
CCDC60-201ENST00000327554 SLC39A2Q9NP94 309 aa14.03□□□□□ -0.16
CCDC60-201ENST00000327554 KCNMB3Q9NPA1 279 aa14.03□□□□□ -0.16
CCDC60-201ENST00000327554 SWAP70Q9UH65 585 aa14.03□□□□□ -0.16
CCDC60-201ENST00000327554 TRPC6Q9Y210 931 aa14.03□□□□□ -0.16
CCDC60-201ENST00000327554 ZNF330Q9Y3S2 320 aaPredicted RBP14.03□□□□□ -0.16
CCDC60-201ENST00000327554 L3MBTL1Q9Y468 752 aa14.03□□□□□ -0.16
CCDC60-201ENST00000327554 CYP2D7A0A087X1C5 515 aa14.02□□□□□ -0.16
CCDC60-201ENST00000327554 KCNMA1Q12791 1236 aa14.02□□□□□ -0.16
CCDC60-201ENST00000327554 CACNA2D4Q7Z3S7 1137 aa14.02□□□□□ -0.16
CCDC60-201ENST00000327554 TMC3Q7Z5M5 1100 aa14.02□□□□□ -0.16
CCDC60-201ENST00000327554 CNOT10Q9H9A5 744 aaKnown RBP14.02□□□□□ -0.16
CCDC60-201ENST00000327554 ANKRD36CQ5JPF3 1778 aa14.02□□□□□ -0.16
CCDC60-201ENST00000327554 M0R2N6 131 aa14.02□□□□□ -0.17
CCDC60-201ENST00000327554 CALML3P27482 149 aa14.02□□□□□ -0.17
CCDC60-201ENST00000327554 BIRC2Q13490 618 aa14.02□□□□□ -0.17
CCDC60-201ENST00000327554 KRT71Q3SY84 523 aa14.02□□□□□ -0.17
CCDC60-201ENST00000327554 SLC9C1Q4G0N8 1177 aa14.02□□□□□ -0.17
CCDC60-201ENST00000327554 RNF217Q8TC41 542 aa14.02□□□□□ -0.17
CCDC60-201ENST00000327554 CCHCR1Q8TD31 782 aa14.02□□□□□ -0.17
CCDC60-201ENST00000327554 ZNF570Q96NI8 536 aa14.02□□□□□ -0.17
CCDC60-201ENST00000327554 PACSIN1Q9BY11 444 aa14.02□□□□□ -0.17
CCDC60-201ENST00000327554 NLRC4Q9NPP4 1024 aa14.02□□□□□ -0.17
CCDC60-201ENST00000327554 A0A0G2JS52 829 aa14.01□□□□□ -0.17
CCDC60-201ENST00000327554 F8VZ95 297 aa14.01□□□□□ -0.17
CCDC60-201ENST00000327554 SERPING1P05155 500 aa14.01□□□□□ -0.17
CCDC60-201ENST00000327554 CLTAP09496 248 aa14.01□□□□□ -0.17
CCDC60-201ENST00000327554 ZBTB48P10074 688 aaPredicted RBP14.01□□□□□ -0.17
CCDC60-201ENST00000327554 ALADP13716 330 aa14.01□□□□□ -0.17
CCDC60-201ENST00000327554 SARNPP82979 210 aaKnown RBP14.01□□□□□ -0.17
CCDC60-201ENST00000327554 ICA1Q05084 483 aa14.01□□□□□ -0.17
CCDC60-201ENST00000327554 TNS2Q63HR2 1409 aa14.01□□□□□ -0.17
CCDC60-201ENST00000327554 CNNM4Q6P4Q7 775 aa14.01□□□□□ -0.17
CCDC60-201ENST00000327554 PIGWQ7Z7B1 504 aa14.01□□□□□ -0.17
CCDC60-201ENST00000327554 CABP7Q86V35 215 aa14.01□□□□□ -0.17
CCDC60-201ENST00000327554 AGAP11Q8TF27 550 aa14.01□□□□□ -0.17
CCDC60-201ENST00000327554 KIF9Q9HAQ2 790 aa14.01□□□□□ -0.17
CCDC60-201ENST00000327554 PCDHA4Q9UN74 947 aa14.01□□□□□ -0.17
CCDC60-201ENST00000327554 ATAD5Q96QE3 1844 aa14.01□□□□□ -0.17
CCDC60-201ENST00000327554 CASZ1Q86V15 1759 aa14.01□□□□□ -0.17
CCDC60-201ENST00000327554 NHSL1Q5SYE7 1610 aa14.01□□□□□ -0.17
CCDC60-201ENST00000327554 KCNK3O14649 394 aa14.01□□□□□ -0.17
CCDC60-201ENST00000327554 SART1O43290 800 aaKnown RBP14.01□□□□□ -0.17
CCDC60-201ENST00000327554 CTNND1O60716 968 aaKnown RBP14.01□□□□□ -0.17
CCDC60-201ENST00000327554 NOL4O94818 638 aa14.01□□□□□ -0.17
CCDC60-201ENST00000327554 SLC5A1P13866 664 aa14.01□□□□□ -0.17
CCDC60-201ENST00000327554 ZNF268Q14587 947 aaPredicted RBP14.01□□□□□ -0.17
CCDC60-201ENST00000327554 ITIH4Q14624 930 aa14.01□□□□□ -0.17
CCDC60-201ENST00000327554 KCTD19Q17RG1 926 aaPredicted RBP14.01□□□□□ -0.17
CCDC60-201ENST00000327554 NLRP10Q86W26 655 aa14.01□□□□□ -0.17
CCDC60-201ENST00000327554 ACTRT1Q8TDG2 376 aa14.01□□□□□ -0.17
CCDC60-201ENST00000327554 ANKS1AQ92625 1134 aa14.01□□□□□ -0.17
CCDC60-201ENST00000327554 SYN2Q92777 582 aaPredicted RBP14.01□□□□□ -0.17
CCDC60-201ENST00000327554 ACSBG1Q96GR2 724 aa14.01□□□□□ -0.17
CCDC60-201ENST00000327554 SPAG5Q96R06 1193 aa14.01□□□□□ -0.17
CCDC60-201ENST00000327554 PANK4Q9NVE7 773 aa14.01□□□□□ -0.17
CCDC60-201ENST00000327554 CICQ96RK0 1608 aaPredicted RBP14.01□□□□□ -0.17
CCDC60-201ENST00000327554 A0A1B0GUL6 1792 aa14□□□□□ -0.17
CCDC60-201ENST00000327554 A0A087X0T9 212 aa14□□□□□ -0.17
CCDC60-201ENST00000327554 CFAP73A6NFT4 308 aa14□□□□□ -0.17
CCDC60-201ENST00000327554 ASAP2O43150 1006 aa14□□□□□ -0.17
CCDC60-201ENST00000327554 DAPK3O43293 454 aa14□□□□□ -0.17
CCDC60-201ENST00000327554 SMNDC1O75940 238 aaKnown RBP eCLIP14□□□□□ -0.17
CCDC60-201ENST00000327554 KIF4AO95239 1232 aa14□□□□□ -0.17
CCDC60-201ENST00000327554 FGRP09769 529 aa14□□□□□ -0.17
CCDC60-201ENST00000327554 FAM228BP0C875 321 aa14□□□□□ -0.17
CCDC60-201ENST00000327554 TRHP20396 242 aaPredicted RBP14□□□□□ -0.17
CCDC60-201ENST00000327554 RPS6KA1Q15418 735 aa14□□□□□ -0.17
CCDC60-201ENST00000327554 HLFQ16534 295 aa14□□□□□ -0.17
CCDC60-201ENST00000327554 SLC18A3Q16572 532 aa14□□□□□ -0.17
CCDC60-201ENST00000327554 KIAA0753Q2KHM9 967 aa14□□□□□ -0.17
CCDC60-201ENST00000327554 SFMBT2Q5VUG0 894 aa14□□□□□ -0.17
CCDC60-201ENST00000327554 LRRC55Q6ZSA7 311 aa14□□□□□ -0.17
CCDC60-201ENST00000327554 ARHGAP27Q6ZUM4 889 aa14□□□□□ -0.17
CCDC60-201ENST00000327554 TBC1D1Q86TI0 1168 aaPredicted RBP14□□□□□ -0.17
CCDC60-201ENST00000327554 PNMA8AQ86V59 439 aaPredicted RBP14□□□□□ -0.17
CCDC60-201ENST00000327554 TBC1D5Q92609 795 aa14□□□□□ -0.17
CCDC60-201ENST00000327554 TAF4BQ92750 862 aa14□□□□□ -0.17
CCDC60-201ENST00000327554 GPKOWQ92917 476 aaPredicted RBP eCLIP14□□□□□ -0.17
CCDC60-201ENST00000327554 CALR3Q96L12 384 aaKnown RBP14□□□□□ -0.17
CCDC60-201ENST00000327554 DDX47Q9H0S4 455 aaKnown RBP14□□□□□ -0.17
CCDC60-201ENST00000327554 LUC7LQ9NQ29 371 aaKnown RBP14□□□□□ -0.17
CCDC60-201ENST00000327554 CEP72Q9P209 647 aa14□□□□□ -0.17
CCDC60-201ENST00000327554 ATP6V0A2Q9Y487 856 aa14□□□□□ -0.17
CCDC60-201ENST00000327554 MROH5Q6ZUA9 1318 aa14□□□□□ -0.17
CCDC60-201ENST00000327554 IRS4O14654 1257 aaPredicted RBP14□□□□□ -0.17
CCDC60-201ENST00000327554 NMT2O60551 498 aa14□□□□□ -0.17
CCDC60-201ENST00000327554 CYP7A1P22680 504 aa14□□□□□ -0.17
CCDC60-201ENST00000327554 PRPHP41219 470 aa14□□□□□ -0.17
CCDC60-201ENST00000327554 TXNRD1Q16881 649 aa14□□□□□ -0.17
CCDC60-201ENST00000327554 KIF6Q6ZMV9 814 aa14□□□□□ -0.17
CCDC60-201ENST00000327554 ANKS4BQ8N8V4 417 aa14□□□□□ -0.17
CCDC60-201ENST00000327554 ATXN2LQ8WWM7 1075 aaKnown RBP14□□□□□ -0.17
CCDC60-201ENST00000327554 AP1M1Q9BXS5 423 aa14□□□□□ -0.17
CCDC60-201ENST00000327554 PNMA2Q9UL42 364 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms