RNA–Protein interactions for RNA: ENST00000325222.8

CUL1-201, Transcript of cullin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL1, Length 3,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL1-201ENST00000325222 TANGO6Q9C0B7 1094 aa16.03■□□□□ 0.16
CUL1-201ENST00000325222 ZMYND12Q9H0C1 365 aa16.03■□□□□ 0.16
CUL1-201ENST00000325222 A1CFQ9NQ94 594 aaKnown RBP16.03■□□□□ 0.16
CUL1-201ENST00000325222 TFCP2L1Q9NZI6 479 aa16.03■□□□□ 0.16
CUL1-201ENST00000325222 ARPP21Q9UBL0 812 aaPredicted RBP16.03■□□□□ 0.16
CUL1-201ENST00000325222 DDX20Q9UHI6 824 aaKnown RBP16.03■□□□□ 0.16
CUL1-201ENST00000325222 TSKSQ9UJT2 592 aa16.03■□□□□ 0.16
CUL1-201ENST00000325222 PALM3A6NDB9 673 aaPredicted RBP16.03■□□□□ 0.16
CUL1-201ENST00000325222 DCDC2CA8MYV0 355 aa16.03■□□□□ 0.16
CUL1-201ENST00000325222 PPP1R2P41236 205 aa16.03■□□□□ 0.16
CUL1-201ENST00000325222 SMTNP53814 917 aa16.03■□□□□ 0.16
CUL1-201ENST00000325222 POLR2FP61218 127 aaKnown RBP16.03■□□□□ 0.16
CUL1-201ENST00000325222 CAVIN4Q5BKX8 364 aa16.03■□□□□ 0.16
CUL1-201ENST00000325222 FAM43BQ6ZT52 329 aaPredicted RBP16.03■□□□□ 0.16
CUL1-201ENST00000325222 FBXO33Q7Z6M2 555 aa16.03■□□□□ 0.16
CUL1-201ENST00000325222 FAM228AQ86W67 206 aa16.03■□□□□ 0.16
CUL1-201ENST00000325222 ANKS1AQ92625 1134 aa16.03■□□□□ 0.16
CUL1-201ENST00000325222 PLCB1Q9NQ66 1216 aa16.03■□□□□ 0.16
CUL1-201ENST00000325222 PHLPP1O60346 1717 aa16.03■□□□□ 0.16
CUL1-201ENST00000325222 AMPD3Q01432 767 aa16.02■□□□□ 0.16
CUL1-201ENST00000325222 ZNF844Q08AG5 666 aa16.02■□□□□ 0.16
CUL1-201ENST00000325222 TBCKQ8TEA7 893 aa16.02■□□□□ 0.16
CUL1-201ENST00000325222 N4BP2L2Q92802 583 aaPredicted RBP16.02■□□□□ 0.16
CUL1-201ENST00000325222 LSM14BQ9BX40 385 aaKnown RBP16.02■□□□□ 0.16
CUL1-201ENST00000325222 FRMD3A2A2Y4 597 aa16.02■□□□□ 0.15
CUL1-201ENST00000325222 SERPING1P05155 500 aa16.02■□□□□ 0.15
CUL1-201ENST00000325222 NONOQ15233 471 aaKnown RBP eCLIP16.02■□□□□ 0.152e-8■■■■■ 28.9
CUL1-201ENST00000325222 ECM1Q16610 540 aa16.02■□□□□ 0.15
CUL1-201ENST00000325222 SFMBT2Q5VUG0 894 aa16.02■□□□□ 0.15
CUL1-201ENST00000325222 PPP4R3AQ6IN85 833 aa16.02■□□□□ 0.15
CUL1-201ENST00000325222 CELF1Q92879 486 aaKnown RBP16.02■□□□□ 0.15
CUL1-201ENST00000325222 TMEM47Q9BQJ4 181 aa16.02■□□□□ 0.15
CUL1-201ENST00000325222 ADAMTS1Q9UHI8 967 aa16.02■□□□□ 0.15
CUL1-201ENST00000325222 ABCB11O95342 1321 aa16.02■□□□□ 0.15
CUL1-201ENST00000325222 SMCO2A6NFE2 343 aa16.01■□□□□ 0.15
CUL1-201ENST00000325222 ZBTB48P10074 688 aaPredicted RBP16.01■□□□□ 0.15
CUL1-201ENST00000325222 NAPAP54920 295 aa16.01■□□□□ 0.15
CUL1-201ENST00000325222 SLC9C1Q4G0N8 1177 aa16.01■□□□□ 0.15
CUL1-201ENST00000325222 C12orf60Q5U649 245 aa16.01■□□□□ 0.15
CUL1-201ENST00000325222 GALNT17Q6IS24 598 aa16.01■□□□□ 0.15
CUL1-201ENST00000325222 MICALCLQ6ZW33 695 aa16.01■□□□□ 0.15
CUL1-201ENST00000325222 NEK8Q86SG6 692 aa16.01■□□□□ 0.15
CUL1-201ENST00000325222 MTMR9Q96QG7 549 aa16.01■□□□□ 0.15
CUL1-201ENST00000325222 ISCUQ9H1K1 167 aa16.01■□□□□ 0.15
CUL1-201ENST00000325222 TAF1DQ9H5J8 278 aaPredicted RBP16.01■□□□□ 0.15
CUL1-201ENST00000325222 CEP72Q9P209 647 aa16.01■□□□□ 0.15
CUL1-201ENST00000325222 BIN2Q9UBW5 565 aaPredicted RBP16.01■□□□□ 0.15
CUL1-201ENST00000325222 ATP6V0A2Q9Y487 856 aa16.01■□□□□ 0.15
CUL1-201ENST00000325222 POTEMA6NI47 508 aa16.01■□□□□ 0.15
CUL1-201ENST00000325222 SLC37A4O43826 429 aa16.01■□□□□ 0.15
CUL1-201ENST00000325222 CLSTN1O94985 981 aa16.01■□□□□ 0.15
CUL1-201ENST00000325222 PDHBP11177 359 aa16.01■□□□□ 0.15
CUL1-201ENST00000325222 CRKLP46109 303 aaKnown RBP16.01■□□□□ 0.15
CUL1-201ENST00000325222 KIAA0753Q2KHM9 967 aa16.01■□□□□ 0.15
CUL1-201ENST00000325222 ZCWPW2Q504Y3 356 aa16.01■□□□□ 0.15
CUL1-201ENST00000325222 PVALEFA0A1B0GWK0 134 aa16■□□□□ 0.15
CUL1-201ENST00000325222 BHMG1C9JSJ3 638 aaPredicted RBP16■□□□□ 0.15
CUL1-201ENST00000325222 PAX7P23759 505 aa16■□□□□ 0.15
CUL1-201ENST00000325222 SLC18A3Q16572 532 aa16■□□□□ 0.15
CUL1-201ENST00000325222 ERFEQ4G0M1 354 aa16■□□□□ 0.15
CUL1-201ENST00000325222 NAIF1Q69YI7 327 aaPredicted RBP16■□□□□ 0.15
CUL1-201ENST00000325222 LARP4BQ92615 738 aaKnown RBP16■□□□□ 0.15
CUL1-201ENST00000325222 DDX12PQ92771 950 aa16■□□□□ 0.15
CUL1-201ENST00000325222 CALML4Q96GE6 196 aa16■□□□□ 0.15
CUL1-201ENST00000325222 AP1M1Q9BXS5 423 aa16■□□□□ 0.15
CUL1-201ENST00000325222 KLRF2D3W0D1 207 aa16■□□□□ 0.15
CUL1-201ENST00000325222 PPP1R12AO14974 1030 aaPredicted RBP16■□□□□ 0.15
CUL1-201ENST00000325222 LRRC63Q05C16 580 aa16■□□□□ 0.15
CUL1-201ENST00000325222 HLTFQ14527 1009 aaKnown RBP eCLIP16■□□□□ 0.15
CUL1-201ENST00000325222 PARP10Q53GL7 1025 aa16■□□□□ 0.15
CUL1-201ENST00000325222 GJA10Q969M2 543 aa16■□□□□ 0.15
CUL1-201ENST00000325222 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16■□□□□ 0.15
CUL1-201ENST00000325222 EDEM3Q9BZQ6 932 aa16■□□□□ 0.15
CUL1-201ENST00000325222 GGA2Q9UJY4 613 aa16■□□□□ 0.15
CUL1-201ENST00000325222 KCNK3O14649 394 aa16■□□□□ 0.15
CUL1-201ENST00000325222 TRAPPC3O43617 180 aa16■□□□□ 0.15
CUL1-201ENST00000325222 NF2P35240 595 aa16■□□□□ 0.15
CUL1-201ENST00000325222 KRT25Q7Z3Z0 450 aa16■□□□□ 0.15
CUL1-201ENST00000325222 SLC51AQ86UW1 340 aa16■□□□□ 0.15
CUL1-201ENST00000325222 TXNRD3Q86VQ6 643 aa16■□□□□ 0.15
CUL1-201ENST00000325222 FAM133AQ8N9E0 248 aa16■□□□□ 0.15
CUL1-201ENST00000325222 SCFD2Q8WU76 684 aa16■□□□□ 0.15
CUL1-201ENST00000325222 CCDC87Q9NVE4 849 aa16■□□□□ 0.15
CUL1-201ENST00000325222 LEMD3Q9Y2U8 911 aa16■□□□□ 0.15
CUL1-201ENST00000325222 GMNCA6NCL1 334 aa15.99■□□□□ 0.15
CUL1-201ENST00000325222 CHUKO15111 745 aa15.99■□□□□ 0.15
CUL1-201ENST00000325222 BSDC1Q9NW68 430 aaPredicted RBP15.99■□□□□ 0.15
CUL1-201ENST00000325222 MCM8Q9UJA3 840 aa15.99■□□□□ 0.15
CUL1-201ENST00000325222 STX8Q9UNK0 236 aa15.99■□□□□ 0.15
CUL1-201ENST00000325222 TDP2O95551 362 aa15.99■□□□□ 0.15
CUL1-201ENST00000325222 GNAQP50148 359 aa15.99■□□□□ 0.15
CUL1-201ENST00000325222 RAPGEF1Q13905 1077 aa15.99■□□□□ 0.15
CUL1-201ENST00000325222 RAD54LQ92698 747 aa15.99■□□□□ 0.15
CUL1-201ENST00000325222 VAT1LQ9HCJ6 419 aa15.99■□□□□ 0.15
CUL1-201ENST00000325222 HAUS2Q9NVX0 235 aa15.99■□□□□ 0.15
CUL1-201ENST00000325222 TBC1D7Q9P0N9 293 aa15.99■□□□□ 0.15
CUL1-201ENST00000325222 ITGA4P13612 1032 aa15.98■□□□□ 0.15
CUL1-201ENST00000325222 ELF1P32519 619 aa15.98■□□□□ 0.15
CUL1-201ENST00000325222 PREPLQ4J6C6 727 aaPredicted RBP15.98■□□□□ 0.15
CUL1-201ENST00000325222 USP17L2Q6R6M4 530 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms