RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 FAM207AQ9NSI2 230 aaPredicted RBP23.73■■□□□ 1.39
LIMS2-201ENST00000324938 NPHP3-ACAD11A0A0J9YXS1 232 aa23.72■■□□□ 1.39
LIMS2-201ENST00000324938 TRAF5O00463 557 aa23.72■■□□□ 1.39
LIMS2-201ENST00000324938 KIF20AO95235 890 aa23.72■■□□□ 1.39
LIMS2-201ENST00000324938 RPA1P27694 616 aa23.72■■□□□ 1.39
LIMS2-201ENST00000324938 GRIPAP1Q4V328 841 aa23.72■■□□□ 1.39
LIMS2-201ENST00000324938 ARSHQ5FYA8 562 aa23.72■■□□□ 1.39
LIMS2-201ENST00000324938 RSBN1LQ6PCB5 846 aaPredicted RBP23.72■■□□□ 1.39
LIMS2-201ENST00000324938 RBBP6Q7Z6E9 1792 aaKnown RBP23.72■■□□□ 1.39
LIMS2-201ENST00000324938 POTEB2H3BUK9 544 aa23.72■■□□□ 1.39
LIMS2-201ENST00000324938 CYP3A4P08684 503 aa23.72■■□□□ 1.39
LIMS2-201ENST00000324938 TAL1P17542 331 aaPredicted RBP23.72■■□□□ 1.39
LIMS2-201ENST00000324938 RXRBP28702 533 aa23.72■■□□□ 1.39
LIMS2-201ENST00000324938 STAT2P52630 851 aa23.72■■□□□ 1.39
LIMS2-201ENST00000324938 GABPB1Q06547 395 aaPredicted RBP23.72■■□□□ 1.39
LIMS2-201ENST00000324938 HERC4Q5GLZ8 1057 aaPredicted RBP23.72■■□□□ 1.39
LIMS2-201ENST00000324938 NCAPH2Q6IBW4 605 aa23.72■■□□□ 1.39
LIMS2-201ENST00000324938 TRAPPC11Q7Z392 1133 aa23.72■■□□□ 1.39
LIMS2-201ENST00000324938 EDEM3Q9BZQ6 932 aa23.72■■□□□ 1.39
LIMS2-201ENST00000324938 MMRN2Q9H8L6 949 aa23.72■■□□□ 1.39
LIMS2-201ENST00000324938 TBC1D7Q9P0N9 293 aa23.72■■□□□ 1.39
LIMS2-201ENST00000324938 TFR2Q9UP52 801 aa23.72■■□□□ 1.39
LIMS2-201ENST00000324938 TCP10L2B9ZVM9 353 aa23.71■■□□□ 1.39
LIMS2-201ENST00000324938 GNA14O95837 355 aa23.71■■□□□ 1.39
LIMS2-201ENST00000324938 MARSP56192 900 aaKnown RBP23.71■■□□□ 1.39
LIMS2-201ENST00000324938 ZC3H3Q8IXZ2 948 aaKnown RBP23.71■■□□□ 1.39
LIMS2-201ENST00000324938 SPICE1Q8N0Z3 855 aa23.71■■□□□ 1.39
LIMS2-201ENST00000324938 MSANTD4Q8NCY6 345 aa23.71■■□□□ 1.39
LIMS2-201ENST00000324938 SCFD1Q8WVM8 642 aa23.71■■□□□ 1.39
LIMS2-201ENST00000324938 CCDC42Q96M95 316 aa23.71■■□□□ 1.39
LIMS2-201ENST00000324938 PURBQ96QR8 312 aaKnown RBP23.71■■□□□ 1.39
LIMS2-201ENST00000324938 KCTD10Q9H3F6 313 aa23.71■■□□□ 1.39
LIMS2-201ENST00000324938 RCCD1A6NED2 376 aa23.71■■□□□ 1.39
LIMS2-201ENST00000324938 SEC31AO94979 1220 aaKnown RBP23.71■■□□□ 1.39
LIMS2-201ENST00000324938 SPATA31C1P0DKV0 1188 aa23.71■■□□□ 1.39
LIMS2-201ENST00000324938 ECE1P42892 770 aa23.71■■□□□ 1.39
LIMS2-201ENST00000324938 VAV2P52735 878 aa23.71■■□□□ 1.39
LIMS2-201ENST00000324938 CACNB1Q02641 598 aaPredicted RBP23.71■■□□□ 1.39
LIMS2-201ENST00000324938 TRAF1Q13077 416 aa23.71■■□□□ 1.39
LIMS2-201ENST00000324938 CCDC40Q4G0X9 1142 aa23.71■■□□□ 1.39
LIMS2-201ENST00000324938 ARHGAP27Q6ZUM4 889 aa23.71■■□□□ 1.39
LIMS2-201ENST00000324938 FAM151AQ8WW52 585 aa23.71■■□□□ 1.39
LIMS2-201ENST00000324938 LACRTQ9GZZ8 138 aa23.71■■□□□ 1.39
LIMS2-201ENST00000324938 ANKZF1Q9H8Y5 726 aa23.71■■□□□ 1.39
LIMS2-201ENST00000324938 STK32BQ9NY57 414 aa23.71■■□□□ 1.39
LIMS2-201ENST00000324938 ARHGAP20Q9P2F6 1191 aa23.71■■□□□ 1.39
LIMS2-201ENST00000324938 TMX2Q9Y320 296 aa23.71■■□□□ 1.39
LIMS2-201ENST00000324938 CTAGE15A4D2H0 777 aa23.7■■□□□ 1.38
LIMS2-201ENST00000324938 CCDC151A5D8V7 595 aa23.7■■□□□ 1.38
LIMS2-201ENST00000324938 MSH4O15457 936 aa23.7■■□□□ 1.38
LIMS2-201ENST00000324938 TFRCP02786 760 aaKnown RBP23.7■■□□□ 1.38
LIMS2-201ENST00000324938 KRT18P05783 430 aaKnown RBP23.7■■□□□ 1.38
LIMS2-201ENST00000324938 CTAGE8P0CG41 777 aa23.7■■□□□ 1.38
LIMS2-201ENST00000324938 HOXA13P31271 388 aaPredicted RBP23.7■■□□□ 1.38
LIMS2-201ENST00000324938 CTAGE6Q86UF2 777 aa23.7■■□□□ 1.38
LIMS2-201ENST00000324938 CTAGE4Q8IX94 777 aa23.7■■□□□ 1.38
LIMS2-201ENST00000324938 SYT2Q8N9I0 419 aaPredicted RBP23.7■■□□□ 1.38
LIMS2-201ENST00000324938 BAP1Q92560 729 aa23.7■■□□□ 1.38
LIMS2-201ENST00000324938 GMLQ99445 158 aa23.7■■□□□ 1.38
LIMS2-201ENST00000324938 TSGA10Q9BZW7 698 aa23.7■■□□□ 1.38
LIMS2-201ENST00000324938 EMILIN3Q9NT22 766 aa23.7■■□□□ 1.38
LIMS2-201ENST00000324938 ZNF70Q9UC06 446 aaPredicted RBP23.7■■□□□ 1.38
LIMS2-201ENST00000324938 VAV3Q9UKW4 847 aa23.7■■□□□ 1.38
LIMS2-201ENST00000324938 COL4A5P29400 1685 aa23.69■■□□□ 1.38
LIMS2-201ENST00000324938 PLEKP08567 350 aaPredicted RBP23.69■■□□□ 1.38
LIMS2-201ENST00000324938 DMTNQ08495 405 aa23.69■■□□□ 1.38
LIMS2-201ENST00000324938 BRD3Q15059 726 aa23.69■■□□□ 1.38
LIMS2-201ENST00000324938 PPP4R3CPQ6ZMV5 832 aa23.69■■□□□ 1.38
LIMS2-201ENST00000324938 NELFCDQ8IXH7 590 aa23.69■■□□□ 1.38
LIMS2-201ENST00000324938 NEK11Q8NG66 645 aa23.69■■□□□ 1.38
LIMS2-201ENST00000324938 GOPCQ9HD26 462 aa23.69■■□□□ 1.38
LIMS2-201ENST00000324938 ARFGAP3Q9NP61 516 aa23.69■■□□□ 1.38
LIMS2-201ENST00000324938 DNM3Q9UQ16 869 aa23.69■■□□□ 1.38
LIMS2-201ENST00000324938 CNTNAP1P78357 1384 aa23.69■■□□□ 1.38
LIMS2-201ENST00000324938 CLRN2A0PK11 232 aa23.69■■□□□ 1.38
LIMS2-201ENST00000324938 ZNF263O14978 683 aa23.69■■□□□ 1.38
LIMS2-201ENST00000324938 LCA5LO95447 670 aa23.69■■□□□ 1.38
LIMS2-201ENST00000324938 SPA17Q15506 151 aa23.69■■□□□ 1.38
LIMS2-201ENST00000324938 KIAA1755Q5JYT7 1200 aa23.69■■□□□ 1.38
LIMS2-201ENST00000324938 PAPD7Q5XG87 772 aaKnown RBP23.69■■□□□ 1.38
LIMS2-201ENST00000324938 TANGO6Q9C0B7 1094 aa23.69■■□□□ 1.38
LIMS2-201ENST00000324938 HDAC9Q9UKV0 1011 aa23.69■■□□□ 1.38
LIMS2-201ENST00000324938 LRRC53A6NM62 1247 aa23.68■■□□□ 1.38
LIMS2-201ENST00000324938 TBC1D8O95759 1140 aa23.68■■□□□ 1.38
LIMS2-201ENST00000324938 VIL1P09327 827 aaKnown RBP23.68■■□□□ 1.38
LIMS2-201ENST00000324938 PSMC6P62333 389 aa23.68■■□□□ 1.38
LIMS2-201ENST00000324938 CYP27A1Q02318 531 aa23.68■■□□□ 1.38
LIMS2-201ENST00000324938 RAD51AP2Q09MP3 1159 aa23.68■■□□□ 1.38
LIMS2-201ENST00000324938 KCNMA1Q12791 1236 aa23.68■■□□□ 1.38
LIMS2-201ENST00000324938 GIT2Q14161 759 aa23.68■■□□□ 1.38
LIMS2-201ENST00000324938 DLGAP5Q15398 846 aa23.68■■□□□ 1.38
LIMS2-201ENST00000324938 EDRF1Q3B7T1 1238 aa23.68■■□□□ 1.38
LIMS2-201ENST00000324938 TRIM59Q8IWR1 403 aa23.68■■□□□ 1.38
LIMS2-201ENST00000324938 ACER1Q8TDN7 264 aa23.68■■□□□ 1.38
LIMS2-201ENST00000324938 PSMD1Q99460 953 aa23.68■■□□□ 1.38
LIMS2-201ENST00000324938 RAB21Q9UL25 225 aa23.68■■□□□ 1.38
LIMS2-201ENST00000324938 ZBTB21Q9ULJ3 1066 aa23.68■■□□□ 1.38
LIMS2-201ENST00000324938 PLA2G4AP47712 749 aa23.68■■□□□ 1.38
LIMS2-201ENST00000324938 KIF5AQ12840 1032 aa23.68■■□□□ 1.38
LIMS2-201ENST00000324938 EZH2Q15910 746 aaKnown RBP23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms