RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-223	ENST00000324771	PAIP2	Q9BPZ3	127 aa	Known RBP	12.98	□□□□□ -0.33
DDR1-223	ENST00000324771	SPZ1	Q9BXG8	430 aa		12.98	□□□□□ -0.33
DDR1-223	ENST00000324771	DDX4	Q9NQI0	724 aa	Known RBP	12.98	□□□□□ -0.33
DDR1-223	ENST00000324771	ANAPC4	Q9UJX5	808 aa		12.98	□□□□□ -0.33
DDR1-223	ENST00000324771	ZBTB22	O15209	634 aa		12.98	□□□□□ -0.33
DDR1-223	ENST00000324771	SRGN	P10124	158 aa		12.98	□□□□□ -0.33
DDR1-223	ENST00000324771	RIC1	Q4ADV7	1423 aa		12.98	□□□□□ -0.33
DDR1-223	ENST00000324771	RMDN3	Q96TC7	470 aa		12.98	□□□□□ -0.33
DDR1-223	ENST00000324771	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	12.98	□□□□□ -0.33
DDR1-223	ENST00000324771	HDAC6	Q9UBN7	1215 aa		12.98	□□□□□ -0.33
DDR1-223	ENST00000324771	DDX41	Q9UJV9	622 aa	Known RBP	12.98	□□□□□ -0.33
DDR1-223	ENST00000324771	CDC23	Q9UJX2	597 aa		12.98	□□□□□ -0.33
DDR1-223	ENST00000324771	MON2	Q7Z3U7	1717 aa		12.98	□□□□□ -0.33
DDR1-223	ENST00000324771	SHTN1	A0MZ66	631 aa		12.98	□□□□□ -0.33
DDR1-223	ENST00000324771	MYMK	A6NI61	221 aa		12.98	□□□□□ -0.33
DDR1-223	ENST00000324771	DPEP1	P16444	411 aa		12.98	□□□□□ -0.33
DDR1-223	ENST00000324771	OAS2	P29728	719 aa	Known RBP	12.98	□□□□□ -0.33
DDR1-223	ENST00000324771	PEX3	P56589	373 aa		12.98	□□□□□ -0.33
DDR1-223	ENST00000324771	DMTN	Q08495	405 aa		12.98	□□□□□ -0.33
DDR1-223	ENST00000324771	COASY	Q13057	564 aa		12.98	□□□□□ -0.33
DDR1-223	ENST00000324771	STRIP1	Q5VSL9	837 aa		12.98	□□□□□ -0.33
DDR1-223	ENST00000324771	FBXO38	Q6PIJ6	1188 aa		12.98	□□□□□ -0.33
DDR1-223	ENST00000324771	UNC13D	Q70J99	1090 aa		12.98	□□□□□ -0.33
DDR1-223	ENST00000324771	TRPC6	Q9Y210	931 aa		12.98	□□□□□ -0.33
DDR1-223	ENST00000324771	FOXP2	O15409	715 aa		12.97	□□□□□ -0.33
DDR1-223	ENST00000324771	SLC37A4	O43826	429 aa		12.97	□□□□□ -0.33
DDR1-223	ENST00000324771	TNNC1	P63316	161 aa		12.97	□□□□□ -0.33
DDR1-223	ENST00000324771	CALCOCO1	Q9P1Z2	691 aa		12.97	□□□□□ -0.33
DDR1-223	ENST00000324771	HGS	O14964	777 aa	Predicted RBP	12.97	□□□□□ -0.33
DDR1-223	ENST00000324771	KLK7	P49862	253 aa		12.97	□□□□□ -0.33
DDR1-223	ENST00000324771	LIG4	P49917	911 aa		12.97	□□□□□ -0.33
DDR1-223	ENST00000324771	DPYD	Q12882	1025 aa		12.97	□□□□□ -0.33
DDR1-223	ENST00000324771	TRPC3	Q13507	836 aa		12.97	□□□□□ -0.33
DDR1-223	ENST00000324771	PPP1R7	Q15435	360 aa		12.97	□□□□□ -0.33
DDR1-223	ENST00000324771	DCPS	Q96C86	337 aa	Known RBP	12.97	□□□□□ -0.33
DDR1-223	ENST00000324771	AGPAT5	Q9NUQ2	364 aa		12.97	□□□□□ -0.33
DDR1-223	ENST00000324771	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	12.97	□□□□□ -0.33
DDR1-223	ENST00000324771	H2AFZ	P0C0S5	128 aa		12.97	□□□□□ -0.33
DDR1-223	ENST00000324771	POLG	P54098	1239 aa	Predicted RBP	12.97	□□□□□ -0.33
DDR1-223	ENST00000324771	PPP4C	P60510	307 aa		12.97	□□□□□ -0.33
DDR1-223	ENST00000324771	NCBP1	Q09161	790 aa	Known RBP	12.97	□□□□□ -0.33
DDR1-223	ENST00000324771	GNPTAB	Q3T906	1256 aa		12.97	□□□□□ -0.33
DDR1-223	ENST00000324771	H2AFV	Q71UI9	128 aa		12.97	□□□□□ -0.33
DDR1-223	ENST00000324771	MCF2L2	Q86YR7	1114 aa		12.97	□□□□□ -0.33
DDR1-223	ENST00000324771	CCDC155	Q8N6L0	562 aa		12.97	□□□□□ -0.33
DDR1-223	ENST00000324771	RAD54L	Q92698	747 aa		12.97	□□□□□ -0.33
DDR1-223	ENST00000324771	DPH5	Q9H2P9	285 aa		12.97	□□□□□ -0.33
DDR1-223	ENST00000324771	ABHD10	Q9NUJ1	306 aa		12.97	□□□□□ -0.33
DDR1-223	ENST00000324771	TRIM10	Q9UDY6	481 aa		12.97	□□□□□ -0.33
DDR1-223	ENST00000324771	ZBED6	P86452	979 aa		12.96	□□□□□ -0.33
DDR1-223	ENST00000324771	SLC7A5	Q01650	507 aa		12.96	□□□□□ -0.33
DDR1-223	ENST00000324771	PARVG	Q9HBI0	331 aa		12.96	□□□□□ -0.33
DDR1-223	ENST00000324771	GCNT4	Q9P109	453 aa		12.96	□□□□□ -0.33
DDR1-223	ENST00000324771	HMGCS2	P54868	508 aa		12.96	□□□□□ -0.33
DDR1-223	ENST00000324771	HOOK3	Q86VS8	718 aa		12.96	□□□□□ -0.33
DDR1-223	ENST00000324771	NACC1	Q96RE7	527 aa		12.96	□□□□□ -0.33
DDR1-223	ENST00000324771	AS3MT	Q9HBK9	375 aa		12.96	□□□□□ -0.33
DDR1-223	ENST00000324771	ST7	Q9NRC1	585 aa		12.96	□□□□□ -0.33
DDR1-223	ENST00000324771	PLEKHG2	Q9H7P9	1386 aa		12.96	□□□□□ -0.34
DDR1-223	ENST00000324771	LGALS16	A8MUM7	142 aa		12.96	□□□□□ -0.34
DDR1-223	ENST00000324771	CYTH3	O43739	400 aa		12.96	□□□□□ -0.34
DDR1-223	ENST00000324771	BCR	P11274	1271 aa		12.96	□□□□□ -0.34
DDR1-223	ENST00000324771	NMT1	P30419	496 aa	Known RBP	12.96	□□□□□ -0.34
DDR1-223	ENST00000324771	KIF11	P52732	1056 aa		12.96	□□□□□ -0.34
DDR1-223	ENST00000324771	LDHD	Q86WU2	507 aa		12.96	□□□□□ -0.34
DDR1-223	ENST00000324771	TRIM58	Q8NG06	486 aa		12.96	□□□□□ -0.34
DDR1-223	ENST00000324771	PRR12	Q9ULL5	1215 aa		12.96	□□□□□ -0.34
DDR1-223	ENST00000324771	EXOC7	Q9UPT5	735 aa		12.96	□□□□□ -0.34
DDR1-223	ENST00000324771		A0A087X0B3	334 aa		12.95	□□□□□ -0.34
DDR1-223	ENST00000324771	WNT7A	O00755	349 aa		12.95	□□□□□ -0.34
DDR1-223	ENST00000324771	GNA14	O95837	355 aa		12.95	□□□□□ -0.34
DDR1-223	ENST00000324771	CFAP221	Q4G0U5	840 aa		12.95	□□□□□ -0.34
DDR1-223	ENST00000324771	OTUD6A	Q7L8S5	288 aa		12.95	□□□□□ -0.34
DDR1-223	ENST00000324771	MAGEF1	Q9HAY2	307 aa		12.95	□□□□□ -0.34
DDR1-223	ENST00000324771	HYOU1	Q9Y4L1	999 aa		12.95	□□□□□ -0.34
DDR1-223	ENST00000324771	ANKRD26	Q9UPS8	1709 aa		12.95	□□□□□ -0.34
DDR1-223	ENST00000324771	LRRC53	A6NM62	1247 aa		12.95	□□□□□ -0.34
DDR1-223	ENST00000324771	EFCAB8	A8MWE9	144 aa		12.95	□□□□□ -0.34
DDR1-223	ENST00000324771	TRIM49	P0CI25	452 aa		12.95	□□□□□ -0.34
DDR1-223	ENST00000324771	TRIM49C	P0CI26	452 aa		12.95	□□□□□ -0.34
DDR1-223	ENST00000324771	GYS2	P54840	703 aa		12.95	□□□□□ -0.34
DDR1-223	ENST00000324771	C2orf54	Q08AI8	447 aa		12.95	□□□□□ -0.34
DDR1-223	ENST00000324771	RNF207	Q6ZRF8	634 aa		12.95	□□□□□ -0.34
DDR1-223	ENST00000324771	GPR161	Q8N6U8	529 aa	Known RBP	12.95	□□□□□ -0.34
DDR1-223	ENST00000324771	DCAF4	Q8WV16	495 aa		12.95	□□□□□ -0.34
DDR1-223	ENST00000324771	SELENOS	Q9BQE4	189 aa		12.95	□□□□□ -0.34
DDR1-223	ENST00000324771	RIC8A	Q9NPQ8	531 aa		12.95	□□□□□ -0.34
DDR1-223	ENST00000324771	ADGRG1	Q9Y653	693 aa		12.95	□□□□□ -0.34
DDR1-223	ENST00000324771	NEBL	O76041	1014 aa		12.95	□□□□□ -0.34
DDR1-223	ENST00000324771	AFP	P02771	609 aa	Known RBP	12.95	□□□□□ -0.34
DDR1-223	ENST00000324771	TMED8	Q6PL24	325 aa	Predicted RBP	12.95	□□□□□ -0.34
DDR1-223	ENST00000324771	AMIGO3	Q86WK7	504 aa		12.95	□□□□□ -0.34
DDR1-223	ENST00000324771	PARD6B	Q9BYG5	372 aa		12.95	□□□□□ -0.34
DDR1-223	ENST00000324771	THAP9	Q9H5L6	903 aa		12.95	□□□□□ -0.34
DDR1-223	ENST00000324771	PALM3	A6NDB9	673 aa	Predicted RBP	12.94	□□□□□ -0.34
DDR1-223	ENST00000324771	IPO5	O00410	1097 aa	Known RBP	12.94	□□□□□ -0.34
DDR1-223	ENST00000324771	GFPT1	Q06210	699 aa	Predicted RBP	12.94	□□□□□ -0.34
DDR1-223	ENST00000324771	DMP1	Q13316	513 aa	Predicted RBP	12.94	□□□□□ -0.34
DDR1-223	ENST00000324771	MESD	Q14696	234 aa		12.94	□□□□□ -0.34
DDR1-223	ENST00000324771	SNRNP48	Q6IEG0	339 aa	Known RBP	12.94	□□□□□ -0.34

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