RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 USP14P54578 494 aa22.74■■□□□ 1.23
RNF40-201ENST00000324685 TMTC4Q5T4D3 741 aa22.74■■□□□ 1.23
RNF40-201ENST00000324685 CDC37Q16543 378 aaPredicted RBP22.74■■□□□ 1.23
RNF40-201ENST00000324685 CCNYQ8ND76 341 aa22.74■■□□□ 1.23
RNF40-201ENST00000324685 EXOC4Q96A65 974 aa22.74■■□□□ 1.23
RNF40-201ENST00000324685 SLC12A6Q9UHW9 1150 aa22.74■■□□□ 1.23
RNF40-201ENST00000324685 PFDN1O60925 122 aa22.74■■□□□ 1.23
RNF40-201ENST00000324685 HSPA2P54652 639 aa22.74■■□□□ 1.23
RNF40-201ENST00000324685 LRRC41Q15345 812 aa22.74■■□□□ 1.23
RNF40-201ENST00000324685 GAS2L3Q86XJ1 694 aa22.74■■□□□ 1.23
RNF40-201ENST00000324685 DNAAF3Q8N9W5 541 aa22.74■■□□□ 1.23
RNF40-201ENST00000324685 TBRG4Q969Z0 631 aaKnown RBP eCLIP22.74■■□□□ 1.232e-7■■■■■ 62.8
RNF40-201ENST00000324685 SCOCQ9UIL1 159 aa22.74■■□□□ 1.23
RNF40-201ENST00000324685 EAPPQ56P03 285 aaPredicted RBP22.73■■□□□ 1.23
RNF40-201ENST00000324685 KCTD6Q8NC69 237 aa22.73■■□□□ 1.23
RNF40-201ENST00000324685 RCOR1Q9UKL0 485 aa22.73■■□□□ 1.23
RNF40-201ENST00000324685 CCNE1P24864 410 aa22.73■■□□□ 1.23
RNF40-201ENST00000324685 TBCKQ8TEA7 893 aa22.73■■□□□ 1.23
RNF40-201ENST00000324685 DBNLQ9UJU6 430 aaKnown RBP22.73■■□□□ 1.23
RNF40-201ENST00000324685 GFPT2O94808 682 aa22.73■■□□□ 1.23
RNF40-201ENST00000324685 FTCDO95954 541 aa22.73■■□□□ 1.23
RNF40-201ENST00000324685 XPAP23025 273 aaPredicted RBP22.73■■□□□ 1.23
RNF40-201ENST00000324685 TSTA3Q13630 321 aaPredicted RBP22.73■■□□□ 1.23
RNF40-201ENST00000324685 KCTD2Q14681 263 aa22.73■■□□□ 1.23
RNF40-201ENST00000324685 SMYD4Q8IYR2 804 aaPredicted RBP22.73■■□□□ 1.23
RNF40-201ENST00000324685 ACRBPQ8NEB7 543 aa22.73■■□□□ 1.23
RNF40-201ENST00000324685 SERPINI1Q99574 410 aa22.73■■□□□ 1.23
RNF40-201ENST00000324685 ADGRL2O95490 1459 aa22.73■■□□□ 1.23
RNF40-201ENST00000324685 ATP7AQ04656 1500 aa22.73■■□□□ 1.23
RNF40-201ENST00000324685 RASGRF2O14827 1237 aa22.73■■□□□ 1.23
RNF40-201ENST00000324685 CYP21A2P08686 494 aa22.73■■□□□ 1.23
RNF40-201ENST00000324685 BASP1P80723 227 aaKnown RBP22.73■■□□□ 1.23
RNF40-201ENST00000324685 ATP8B3O60423 1300 aa22.73■■□□□ 1.23
RNF40-201ENST00000324685 ZMYND10O75800 440 aa22.73■■□□□ 1.23
RNF40-201ENST00000324685 KRT10P13645 584 aa22.73■■□□□ 1.23
RNF40-201ENST00000324685 ADORA1P30542 326 aa22.73■■□□□ 1.23
RNF40-201ENST00000324685 EIF4A3P38919 411 aaKnown RBP22.73■■□□□ 1.23
RNF40-201ENST00000324685 CDR2Q01850 454 aa22.73■■□□□ 1.23
RNF40-201ENST00000324685 CUL1Q13616 776 aa22.73■■□□□ 1.23
RNF40-201ENST00000324685 ZNF449Q6P9G9 518 aa22.73■■□□□ 1.23
RNF40-201ENST00000324685 EIF2AQ9BY44 585 aaKnown RBP22.73■■□□□ 1.23
RNF40-201ENST00000324685 PEG3Q9GZU2 1588 aa22.73■■□□□ 1.23
RNF40-201ENST00000324685 SOWAHDA6NJG2 315 aa22.72■■□□□ 1.23
RNF40-201ENST00000324685 RPSAP08865 295 aaKnown RBP22.72■■□□□ 1.23
RNF40-201ENST00000324685 CCND2P30279 289 aa22.72■■□□□ 1.23
RNF40-201ENST00000324685 ALCAMQ13740 583 aa22.72■■□□□ 1.23
RNF40-201ENST00000324685 CCDC138Q96M89 665 aa22.72■■□□□ 1.23
RNF40-201ENST00000324685 UBE2TQ9NPD8 197 aaPredicted RBP22.72■■□□□ 1.23
RNF40-201ENST00000324685 AKT3Q9Y243 479 aa22.72■■□□□ 1.23
RNF40-201ENST00000324685 DR1Q01658 176 aa22.72■■□□□ 1.23
RNF40-201ENST00000324685 FAM133BQ5BKY9 247 aaKnown RBP22.72■■□□□ 1.23
RNF40-201ENST00000324685 CHMP6Q96FZ7 201 aa22.72■■□□□ 1.23
RNF40-201ENST00000324685 APOL6Q9BWW8 343 aa22.72■■□□□ 1.23
RNF40-201ENST00000324685 SEC23IPQ9Y6Y8 1000 aaKnown RBP22.72■■□□□ 1.23
RNF40-201ENST00000324685 FRMD3A2A2Y4 597 aa22.72■■□□□ 1.23
RNF40-201ENST00000324685 SKIP12755 728 aa22.72■■□□□ 1.23
RNF40-201ENST00000324685 RSRC2Q7L4I2 434 aaKnown RBP22.72■■□□□ 1.23
RNF40-201ENST00000324685 CNKSR1Q969H4 720 aa22.72■■□□□ 1.23
RNF40-201ENST00000324685 GOLGA8SH3BPF8 625 aa22.72■■□□□ 1.23
RNF40-201ENST00000324685 LRRN2O75325 713 aa22.72■■□□□ 1.23
RNF40-201ENST00000324685 TOM1L1O75674 476 aa22.72■■□□□ 1.23
RNF40-201ENST00000324685 APBA3O96018 575 aa22.72■■□□□ 1.23
RNF40-201ENST00000324685 PARD6BQ9BYG5 372 aa22.72■■□□□ 1.23
RNF40-201ENST00000324685 DIS3Q9Y2L1 958 aaKnown RBP22.72■■□□□ 1.23
RNF40-201ENST00000324685 SRPRBQ9Y5M8 271 aaKnown RBP22.72■■□□□ 1.23
RNF40-201ENST00000324685 ATP10AO60312 1499 aa22.72■■□□□ 1.23
RNF40-201ENST00000324685 SH2B2O14492 632 aaPredicted RBP22.71■■□□□ 1.23
RNF40-201ENST00000324685 PRPF3O43395 683 aaKnown RBP22.71■■□□□ 1.23
RNF40-201ENST00000324685 ATG16L1Q676U5 607 aa22.71■■□□□ 1.23
RNF40-201ENST00000324685 CDHR1Q96JP9 859 aa22.71■■□□□ 1.23
RNF40-201ENST00000324685 IQANK1A0A1B0GTG1 560 aa22.71■■□□□ 1.23
RNF40-201ENST00000324685 EXOC1LA0A1B0GW35 172 aa22.71■■□□□ 1.23
RNF40-201ENST00000324685 ADD2P35612 726 aa22.71■■□□□ 1.23
RNF40-201ENST00000324685 ADCY2Q08462 1091 aa22.71■■□□□ 1.23
RNF40-201ENST00000324685 ADCY1Q08828 1119 aa22.71■■□□□ 1.23
RNF40-201ENST00000324685 C6orf118Q5T5N4 469 aa22.71■■□□□ 1.23
RNF40-201ENST00000324685 PI4K2BQ8TCG2 481 aa22.71■■□□□ 1.23
RNF40-201ENST00000324685 FAM149B1Q96BN6 582 aa22.71■■□□□ 1.23
RNF40-201ENST00000324685 CUL4AQ13619 759 aa22.71■■□□□ 1.23
RNF40-201ENST00000324685 DCPSQ96C86 337 aaKnown RBP22.71■■□□□ 1.23
RNF40-201ENST00000324685 NUDCD1Q96RS6 583 aa22.71■■□□□ 1.23
RNF40-201ENST00000324685 ZMYND12Q9H0C1 365 aa22.71■■□□□ 1.23
RNF40-201ENST00000324685 NVLO15381 856 aaKnown RBP22.71■■□□□ 1.23
RNF40-201ENST00000324685 NDUFA10O95299 355 aa22.71■■□□□ 1.23
RNF40-201ENST00000324685 NR1D1P20393 614 aa22.71■■□□□ 1.23
RNF40-201ENST00000324685 SURF1Q15526 300 aa22.71■■□□□ 1.23
RNF40-201ENST00000324685 PPP4R3CPQ6ZMV5 832 aa22.71■■□□□ 1.23
RNF40-201ENST00000324685 RASGRP4Q8TDF6 673 aa22.71■■□□□ 1.23
RNF40-201ENST00000324685 FGFR1OP2Q9NVK5 253 aa22.71■■□□□ 1.23
RNF40-201ENST00000324685 DEPDC1BQ8WUY9 529 aa22.71■■□□□ 1.23
RNF40-201ENST00000324685 EMILIN3Q9NT22 766 aa22.71■■□□□ 1.23
RNF40-201ENST00000324685 USP21Q9UK80 565 aa22.71■■□□□ 1.23
RNF40-201ENST00000324685 CLIC2O15247 247 aa22.7■■□□□ 1.22
RNF40-201ENST00000324685 CCNA1P78396 465 aa22.7■■□□□ 1.22
RNF40-201ENST00000324685 TAF11Q15544 211 aa22.7■■□□□ 1.22
RNF40-201ENST00000324685 EEF2KMTQ96G04 330 aa22.7■■□□□ 1.22
RNF40-201ENST00000324685 IPO5O00410 1097 aaKnown RBP22.7■■□□□ 1.22
RNF40-201ENST00000324685 ART3Q13508 389 aa22.7■■□□□ 1.22
RNF40-201ENST00000324685 ADD3Q9UEY8 706 aaKnown RBP22.7■■□□□ 1.22
RNF40-201ENST00000324685 MYLK4Q86YV6 388 aaPredicted RBP22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms