RNA–Protein interactions for RNA: ENST00000324659.12

NLRC3-201, Transcript of NLR family CARD domain containing 3, humanhuman

TSL 5 BASIC

Gene NLRC3, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-201ENST00000324659 KRT12Q99456 494 aa13.29□□□□□ -0.28
NLRC3-201ENST00000324659 EYA3Q99504 573 aa13.29□□□□□ -0.28
NLRC3-201ENST00000324659 NHSL1Q5SYE7 1610 aa13.29□□□□□ -0.28
NLRC3-201ENST00000324659 FAM196BA6NMK8 535 aa13.29□□□□□ -0.28
NLRC3-201ENST00000324659 KIF1CO43896 1103 aaKnown RBP13.29□□□□□ -0.28
NLRC3-201ENST00000324659 HEXIM1O94992 359 aaKnown RBP13.29□□□□□ -0.28
NLRC3-201ENST00000324659 TCP1P17987 556 aaKnown RBP13.29□□□□□ -0.28
NLRC3-201ENST00000324659 POLR2FP61218 127 aaKnown RBP13.29□□□□□ -0.28
NLRC3-201ENST00000324659 EHHADHQ08426 723 aa13.29□□□□□ -0.28
NLRC3-201ENST00000324659 GRB10Q13322 594 aa13.29□□□□□ -0.28
NLRC3-201ENST00000324659 GRAPQ13588 217 aa13.29□□□□□ -0.28
NLRC3-201ENST00000324659 RAPGEF1Q13905 1077 aa13.29□□□□□ -0.28
NLRC3-201ENST00000324659 SBK1Q52WX2 424 aa13.29□□□□□ -0.28
NLRC3-201ENST00000324659 MYH14Q7Z406 1995 aaKnown RBP13.29□□□□□ -0.28
NLRC3-201ENST00000324659 GRAPLQ8TC17 118 aaPredicted RBP13.29□□□□□ -0.28
NLRC3-201ENST00000324659 NOX5Q96PH1 765 aa13.29□□□□□ -0.28
NLRC3-201ENST00000324659 TLR10Q9BXR5 811 aa13.29□□□□□ -0.28
NLRC3-201ENST00000324659 PALMO75781 387 aa13.29□□□□□ -0.28
NLRC3-201ENST00000324659 CDR1P51861 262 aa13.29□□□□□ -0.28
NLRC3-201ENST00000324659 EPHB4P54760 987 aa13.29□□□□□ -0.28
NLRC3-201ENST00000324659 SATB1Q01826 763 aa13.29□□□□□ -0.28
NLRC3-201ENST00000324659 PRR5LQ6MZQ0 368 aa13.29□□□□□ -0.28
NLRC3-201ENST00000324659 GJD4Q96KN9 370 aaPredicted RBP13.29□□□□□ -0.28
NLRC3-201ENST00000324659 SCLT1Q96NL6 688 aa13.29□□□□□ -0.28
NLRC3-201ENST00000324659 BLOC1S4Q9NUP1 217 aa13.29□□□□□ -0.28
NLRC3-201ENST00000324659 OPA1O60313 960 aa13.28□□□□□ -0.28
NLRC3-201ENST00000324659 GUCY1A3Q02108 690 aa13.28□□□□□ -0.28
NLRC3-201ENST00000324659 E2F5Q15329 346 aa13.28□□□□□ -0.28
NLRC3-201ENST00000324659 DDX12PQ92771 950 aa13.28□□□□□ -0.28
NLRC3-201ENST00000324659 AK8Q96MA6 479 aa13.28□□□□□ -0.28
NLRC3-201ENST00000324659 LSM14BQ9BX40 385 aaKnown RBP13.28□□□□□ -0.28
NLRC3-201ENST00000324659 LRRC4BQ9NT99 713 aa13.28□□□□□ -0.28
NLRC3-201ENST00000324659 ODF2LQ9ULJ1 636 aa13.28□□□□□ -0.28
NLRC3-201ENST00000324659 USP17L5A8MUK1 530 aa13.28□□□□□ -0.28
NLRC3-201ENST00000324659 LAD1O00515 517 aa13.28□□□□□ -0.28
NLRC3-201ENST00000324659 RASA1P20936 1047 aa13.28□□□□□ -0.28
NLRC3-201ENST00000324659 HPDP32754 393 aaPredicted RBP13.28□□□□□ -0.28
NLRC3-201ENST00000324659 PRPHP41219 470 aa13.28□□□□□ -0.28
NLRC3-201ENST00000324659 GSTO1P78417 241 aa13.28□□□□□ -0.28
NLRC3-201ENST00000324659 NNTQ13423 1086 aa13.28□□□□□ -0.28
NLRC3-201ENST00000324659 KLHDC7AQ5VTJ3 777 aa13.28□□□□□ -0.28
NLRC3-201ENST00000324659 CENPPQ6IPU0 288 aa13.28□□□□□ -0.28
NLRC3-201ENST00000324659 PACSIN1Q9BY11 444 aa13.28□□□□□ -0.28
NLRC3-201ENST00000324659 ZMYND12Q9H0C1 365 aa13.28□□□□□ -0.28
NLRC3-201ENST00000324659 CUEDC2Q9H467 287 aa13.28□□□□□ -0.28
NLRC3-201ENST00000324659 A0A1W2PQJ5 194 aa13.27□□□□□ -0.28
NLRC3-201ENST00000324659 PALM3A6NDB9 673 aaPredicted RBP13.27□□□□□ -0.28
NLRC3-201ENST00000324659 EIF3HO15372 352 aaKnown RBP eCLIP13.27□□□□□ -0.28
NLRC3-201ENST00000324659 RPSAP08865 295 aaKnown RBP13.27□□□□□ -0.28
NLRC3-201ENST00000324659 PAX7P23759 505 aa13.27□□□□□ -0.28
NLRC3-201ENST00000324659 GNA11P29992 359 aa13.27□□□□□ -0.28
NLRC3-201ENST00000324659 HLTFQ14527 1009 aaKnown RBP eCLIP13.27□□□□□ -0.28
NLRC3-201ENST00000324659 UBE2SQ16763 222 aa13.27□□□□□ -0.28
NLRC3-201ENST00000324659 CFAP58Q5T655 872 aa13.27□□□□□ -0.28
NLRC3-201ENST00000324659 ZNF662Q6ZS27 426 aa13.27□□□□□ -0.28
NLRC3-201ENST00000324659 MAATS1Q7Z4T9 603 aa13.27□□□□□ -0.28
NLRC3-201ENST00000324659 TBC1D5Q92609 795 aa13.27□□□□□ -0.28
NLRC3-201ENST00000324659 VEZTQ9HBM0 779 aa13.27□□□□□ -0.28
NLRC3-201ENST00000324659 CD209Q9NNX6 404 aa13.27□□□□□ -0.28
NLRC3-201ENST00000324659 NEDD9Q14511 834 aa13.27□□□□□ -0.28
NLRC3-201ENST00000324659 PNMA5Q96PV4 448 aa13.27□□□□□ -0.28
NLRC3-201ENST00000324659 FGFBP2Q9BYJ0 223 aa13.27□□□□□ -0.28
NLRC3-201ENST00000324659 ADAMTS1Q9UHI8 967 aa13.27□□□□□ -0.28
NLRC3-201ENST00000324659 CASZ1Q86V15 1759 aa13.27□□□□□ -0.28
NLRC3-201ENST00000324659 GRIN2DO15399 1336 aa13.27□□□□□ -0.29
NLRC3-201ENST00000324659 GOLGA8KD6RF30 607 aa13.27□□□□□ -0.29
NLRC3-201ENST00000324659 CFAP221Q4G0U5 840 aa13.27□□□□□ -0.29
NLRC3-201ENST00000324659 CCDC84Q86UT8 332 aaPredicted RBP13.27□□□□□ -0.29
NLRC3-201ENST00000324659 KIAA0825Q8IV33 1275 aa13.27□□□□□ -0.29
NLRC3-201ENST00000324659 FAM133AQ8N9E0 248 aa13.27□□□□□ -0.29
NLRC3-201ENST00000324659 BAP1Q92560 729 aa13.27□□□□□ -0.29
NLRC3-201ENST00000324659 CEP95Q96GE4 821 aa13.27□□□□□ -0.29
NLRC3-201ENST00000324659 RBM17Q96I25 401 aaKnown RBP13.27□□□□□ -0.29
NLRC3-201ENST00000324659 NPHP3-ACAD11A0A0J9YXS1 232 aa13.26□□□□□ -0.29
NLRC3-201ENST00000324659 KLRC1P26715 233 aa13.26□□□□□ -0.29
NLRC3-201ENST00000324659 ELF1P32519 619 aa13.26□□□□□ -0.29
NLRC3-201ENST00000324659 PDXDC1Q6P996 788 aa13.26□□□□□ -0.29
NLRC3-201ENST00000324659 UNC13DQ70J99 1090 aa13.26□□□□□ -0.29
NLRC3-201ENST00000324659 DAGLBQ8NCG7 672 aa13.26□□□□□ -0.29
NLRC3-201ENST00000324659 TSG101Q99816 390 aa13.26□□□□□ -0.29
NLRC3-201ENST00000324659 DBNDD1Q9H9R9 158 aa13.26□□□□□ -0.29
NLRC3-201ENST00000324659 SHOX2O60902 331 aaPredicted RBP13.26□□□□□ -0.29
NLRC3-201ENST00000324659 SKAP2O75563 359 aaPredicted RBP13.26□□□□□ -0.29
NLRC3-201ENST00000324659 EPS15P42566 896 aa13.26□□□□□ -0.29
NLRC3-201ENST00000324659 KCNMA1Q12791 1236 aa13.26□□□□□ -0.29
NLRC3-201ENST00000324659 BIRC2Q13490 618 aa13.26□□□□□ -0.29
NLRC3-201ENST00000324659 NAA25Q14CX7 972 aa13.26□□□□□ -0.29
NLRC3-201ENST00000324659 TMEM266Q2M3C6 531 aa13.26□□□□□ -0.29
NLRC3-201ENST00000324659 FIGNQ5HY92 759 aa13.26□□□□□ -0.29
NLRC3-201ENST00000324659 NAIF1Q69YI7 327 aaPredicted RBP13.26□□□□□ -0.29
NLRC3-201ENST00000324659 CDK8P49336 464 aa13.26□□□□□ -0.29
NLRC3-201ENST00000324659 CDK17Q00537 523 aa13.26□□□□□ -0.29
NLRC3-201ENST00000324659 KIAA0753Q2KHM9 967 aa13.26□□□□□ -0.29
NLRC3-201ENST00000324659 SLC9C1Q4G0N8 1177 aa13.26□□□□□ -0.29
NLRC3-201ENST00000324659 SFMBT2Q5VUG0 894 aa13.26□□□□□ -0.29
NLRC3-201ENST00000324659 KRT79Q5XKE5 535 aa13.26□□□□□ -0.29
NLRC3-201ENST00000324659 GALNT17Q6IS24 598 aa13.26□□□□□ -0.29
NLRC3-201ENST00000324659 MAGEF1Q9HAY2 307 aa13.26□□□□□ -0.29
NLRC3-201ENST00000324659 HSPA1LP34931 641 aa13.25□□□□□ -0.29
NLRC3-201ENST00000324659 SLC16A2P36021 539 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms