RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 ZNF76P36508 570 aa8.01□□□□□ -1.13
CSTF3-201ENST00000323959 PPP4CP60510 307 aa8.01□□□□□ -1.13
CSTF3-201ENST00000323959 ATAT1Q5SQI0 421 aa8.01□□□□□ -1.13
CSTF3-201ENST00000323959 GDF6Q6KF10 455 aaPredicted RBP8.01□□□□□ -1.13
CSTF3-201ENST00000323959 DCLRE1AQ6PJP8 1040 aa8.01□□□□□ -1.13
CSTF3-201ENST00000323959 MAMSTRQ6ZN01 415 aa8.01□□□□□ -1.13
CSTF3-201ENST00000323959 OR6J1Q8NGC5 347 aa8.01□□□□□ -1.13
CSTF3-201ENST00000323959 AFG1LQ8WV93 481 aa8.01□□□□□ -1.13
CSTF3-201ENST00000323959 DDX23Q9BUQ8 820 aaKnown RBP8.01□□□□□ -1.13
CSTF3-201ENST00000323959 VCPKMTQ9H867 229 aa8.01□□□□□ -1.13
CSTF3-201ENST00000323959 KCNK12Q9HB15 430 aa8.01□□□□□ -1.13
CSTF3-201ENST00000323959 DBR1Q9UK59 544 aaKnown RBP8.01□□□□□ -1.13
CSTF3-201ENST00000323959 LZTS1Q9Y250 596 aa8.01□□□□□ -1.13
CSTF3-201ENST00000323959 DMDP11532 3685 aa8.01□□□□□ -1.13
CSTF3-201ENST00000323959 CFHP08603 1231 aa8□□□□□ -1.13
CSTF3-201ENST00000323959 TDGF1P13385 188 aa8□□□□□ -1.13
CSTF3-201ENST00000323959 GLULP15104 373 aa8□□□□□ -1.13
CSTF3-201ENST00000323959 SPINK2P20155 84 aa8□□□□□ -1.13
CSTF3-201ENST00000323959 GUCY1A2P33402 732 aa8□□□□□ -1.13
CSTF3-201ENST00000323959 SERINC3Q13530 473 aa8□□□□□ -1.13
CSTF3-201ENST00000323959 LRRC24Q50LG9 513 aa8□□□□□ -1.13
CSTF3-201ENST00000323959 ZNF618Q5T7W0 954 aa8□□□□□ -1.13
CSTF3-201ENST00000323959 STK31Q9BXU1 1019 aa8□□□□□ -1.13
CSTF3-201ENST00000323959 MYH1P12882 1939 aa8□□□□□ -1.13
CSTF3-201ENST00000323959 ZZEF1O43149 2961 aa8□□□□□ -1.13
CSTF3-201ENST00000323959 MYO7AQ13402 2215 aa8□□□□□ -1.13
CSTF3-201ENST00000323959 TEP1Q99973 2627 aaKnown RBP8□□□□□ -1.13
CSTF3-201ENST00000323959 A6NJR5 290 aa8□□□□□ -1.13
CSTF3-201ENST00000323959 H0Y626 953 aa8□□□□□ -1.13
CSTF3-201ENST00000323959 TRIM16O95361 564 aa8□□□□□ -1.13
CSTF3-201ENST00000323959 PRB1P04280 392 aa8□□□□□ -1.13
CSTF3-201ENST00000323959 ANKRD35Q8N283 1001 aa8□□□□□ -1.13
CSTF3-201ENST00000323959 KLHL23Q8NBE8 558 aa8□□□□□ -1.13
CSTF3-201ENST00000323959 SH3RF3Q8TEJ3 882 aaPredicted RBP8□□□□□ -1.13
CSTF3-201ENST00000323959 SLC4A5Q9BY07 1137 aa8□□□□□ -1.13
CSTF3-201ENST00000323959 ARHGEF10LQ9HCE6 1279 aa8□□□□□ -1.13
CSTF3-201ENST00000323959 RPS9P46781 194 aaKnown RBP7.99□□□□□ -1.13
CSTF3-201ENST00000323959 PRKCQQ04759 706 aa7.99□□□□□ -1.13
CSTF3-201ENST00000323959 CHMP4BQ9H444 224 aaKnown RBP7.99□□□□□ -1.13
CSTF3-201ENST00000323959 GTF2IRD1Q9UHL9 959 aa7.99□□□□□ -1.13
CSTF3-201ENST00000323959 TSC2P49815 1807 aa7.99□□□□□ -1.13
CSTF3-201ENST00000323959 RALGAPA1Q6GYQ0 2036 aa7.99□□□□□ -1.13
CSTF3-201ENST00000323959 GRM8O00222 908 aa7.99□□□□□ -1.13
CSTF3-201ENST00000323959 VAMP4O75379 141 aa7.99□□□□□ -1.13
CSTF3-201ENST00000323959 OAZ1P54368 228 aa7.99□□□□□ -1.13
CSTF3-201ENST00000323959 LRIG1Q96JA1 1093 aa7.99□□□□□ -1.13
CSTF3-201ENST00000323959 CCDC8Q9H0W5 538 aaPredicted RBP7.99□□□□□ -1.13
CSTF3-201ENST00000323959 TMX2Q9Y320 296 aa7.99□□□□□ -1.13
CSTF3-201ENST00000323959 MRPL42Q9Y6G3 142 aaKnown RBP7.99□□□□□ -1.13
CSTF3-201ENST00000323959 VPS13AQ96RL7 3174 aa7.99□□□□□ -1.13
CSTF3-201ENST00000323959 RSPH10B2B2RC85 870 aa7.99□□□□□ -1.13
CSTF3-201ENST00000323959 SEC24BO95487 1268 aa7.99□□□□□ -1.13
CSTF3-201ENST00000323959 RSPH10BP0C881 870 aa7.99□□□□□ -1.13
CSTF3-201ENST00000323959 SLC4A10Q6U841 1118 aa7.99□□□□□ -1.13
CSTF3-201ENST00000323959 CERS3Q8IU89 383 aa7.99□□□□□ -1.13
CSTF3-201ENST00000323959 CLDN23Q96B33 292 aa7.99□□□□□ -1.13
CSTF3-201ENST00000323959 NSUN4Q96CB9 384 aaKnown RBP7.99□□□□□ -1.13
CSTF3-201ENST00000323959 ABCF2Q9UG63 623 aa7.99□□□□□ -1.13
CSTF3-201ENST00000323959 A0A1W2PRG0 241 aa7.98□□□□□ -1.13
CSTF3-201ENST00000323959 PER2O15055 1255 aa7.98□□□□□ -1.13
CSTF3-201ENST00000323959 IPO8O15397 1037 aaKnown RBP7.98□□□□□ -1.13
CSTF3-201ENST00000323959 GP1BBP13224 206 aa7.98□□□□□ -1.13
CSTF3-201ENST00000323959 FAM43BQ6ZT52 329 aaPredicted RBP7.98□□□□□ -1.13
CSTF3-201ENST00000323959 NGRNQ9NPE2 291 aaKnown RBP7.98□□□□□ -1.13
CSTF3-201ENST00000323959 AAASQ9NRG9 546 aa7.98□□□□□ -1.13
CSTF3-201ENST00000323959 SERPINB13Q9UIV8 391 aa7.98□□□□□ -1.13
CSTF3-201ENST00000323959 KANSL1LA0AUZ9 987 aa7.98□□□□□ -1.13
CSTF3-201ENST00000323959 NCAM2O15394 837 aa7.98□□□□□ -1.13
CSTF3-201ENST00000323959 NARSO43776 548 aaKnown RBP7.98□□□□□ -1.13
CSTF3-201ENST00000323959 EXOSC9Q06265 439 aaKnown RBP7.98□□□□□ -1.13
CSTF3-201ENST00000323959 SIM2Q14190 667 aaPredicted RBP7.98□□□□□ -1.13
CSTF3-201ENST00000323959 RABL6Q3YEC7 729 aaPredicted RBP7.98□□□□□ -1.13
CSTF3-201ENST00000323959 DAB2IPQ5VWQ8 1189 aa7.98□□□□□ -1.13
CSTF3-201ENST00000323959 MAPKAPK5Q8IW41 473 aa7.98□□□□□ -1.13
CSTF3-201ENST00000323959 MICAL1Q8TDZ2 1067 aa7.98□□□□□ -1.13
CSTF3-201ENST00000323959 ZNF384Q8TF68 577 aa7.98□□□□□ -1.13
CSTF3-201ENST00000323959 MKNK1Q9BUB5 465 aa7.98□□□□□ -1.13
CSTF3-201ENST00000323959 DKK4Q9UBT3 224 aa7.98□□□□□ -1.13
CSTF3-201ENST00000323959 PTPRCP08575 1304 aa7.98□□□□□ -1.13
CSTF3-201ENST00000323959 LOXHD1Q8IVV2 1947 aa7.97□□□□□ -1.13
CSTF3-201ENST00000323959 EPN2O95208 641 aa7.97□□□□□ -1.13
CSTF3-201ENST00000323959 RDXP35241 583 aaKnown RBP7.97□□□□□ -1.13
CSTF3-201ENST00000323959 RBM10P98175 930 aaKnown RBP7.97□□□□□ -1.13
CSTF3-201ENST00000323959 SEPT2Q15019 361 aa7.97□□□□□ -1.13
CSTF3-201ENST00000323959 KIAA1755Q5JYT7 1200 aa7.97□□□□□ -1.13
CSTF3-201ENST00000323959 ZKSCAN2Q63HK3 967 aa7.97□□□□□ -1.13
CSTF3-201ENST00000323959 KIAA1211Q6ZU35 1233 aa7.97□□□□□ -1.13
CSTF3-201ENST00000323959 CCDC149Q6ZUS6 474 aa7.97□□□□□ -1.13
CSTF3-201ENST00000323959 MRPL50Q8N5N7 158 aaKnown RBP7.97□□□□□ -1.13
CSTF3-201ENST00000323959 NELL2Q99435 816 aa7.97□□□□□ -1.13
CSTF3-201ENST00000323959 APOL5Q9BWW9 433 aa7.97□□□□□ -1.13
CSTF3-201ENST00000323959 FBXO3Q9UK99 471 aa7.97□□□□□ -1.13
CSTF3-201ENST00000323959 FRMPD2Q68DX3 1309 aaPredicted RBP7.97□□□□□ -1.13
CSTF3-201ENST00000323959 HECTD1Q9ULT8 2610 aa7.97□□□□□ -1.13
CSTF3-201ENST00000323959 MYH7BA7E2Y1 1941 aa7.97□□□□□ -1.13
CSTF3-201ENST00000323959 DGKIO75912 1065 aa7.97□□□□□ -1.13
CSTF3-201ENST00000323959 BPTFQ12830 3046 aa7.97□□□□□ -1.13
CSTF3-201ENST00000323959 ATP2B3Q16720 1220 aa7.97□□□□□ -1.13
CSTF3-201ENST00000323959 TKFCQ3LXA3 575 aa7.97□□□□□ -1.13
CSTF3-201ENST00000323959 TMEM179Q6ZVK1 233 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms