RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 GOLPH3Q9H4A6 298 aa16.7■□□□□ 0.26
VARS2-201ENST00000321897 ADD3Q9UEY8 706 aaKnown RBP16.7■□□□□ 0.26
VARS2-201ENST00000321897 FAM205AQ6ZU69 1335 aa16.7■□□□□ 0.26
VARS2-201ENST00000321897 TCRBV5S4A2TA0A5A2 114 aa16.7■□□□□ 0.26
VARS2-201ENST00000321897 GH2P01242 217 aa16.7■□□□□ 0.26
VARS2-201ENST00000321897 ZNF579Q8NAF0 562 aaKnown RBP16.7■□□□□ 0.26
VARS2-201ENST00000321897 PCDHA6Q9UN73 950 aa16.7■□□□□ 0.26
VARS2-201ENST00000321897 USTQ9Y2C2 406 aa16.7■□□□□ 0.26
VARS2-201ENST00000321897 PCDHA8Q9Y5H6 950 aa16.7■□□□□ 0.26
VARS2-201ENST00000321897 SEMA3EO15041 775 aa16.69■□□□□ 0.26
VARS2-201ENST00000321897 EEF1GP26641 437 aaKnown RBP16.69■□□□□ 0.26
VARS2-201ENST00000321897 SEC24CP53992 1094 aa16.69■□□□□ 0.26
VARS2-201ENST00000321897 GRIPAP1Q4V328 841 aa16.69■□□□□ 0.26
VARS2-201ENST00000321897 NFRKBQ6P4R8 1299 aa16.69■□□□□ 0.26
VARS2-201ENST00000321897 AP1M1Q9BXS5 423 aa16.69■□□□□ 0.26
VARS2-201ENST00000321897 EHMT1Q9H9B1 1298 aa16.69■□□□□ 0.26
VARS2-201ENST00000321897 EHD2Q9NZN4 543 aa16.69■□□□□ 0.26
VARS2-201ENST00000321897 LRRC53A6NM62 1247 aa16.69■□□□□ 0.26
VARS2-201ENST00000321897 FGFR2P21802 821 aa16.69■□□□□ 0.26
VARS2-201ENST00000321897 USP14P54578 494 aa16.69■□□□□ 0.26
VARS2-201ENST00000321897 LACTBP83111 547 aaPredicted RBP16.69■□□□□ 0.26
VARS2-201ENST00000321897 DLGAP5Q15398 846 aa16.69■□□□□ 0.26
VARS2-201ENST00000321897 FAM178BQ8IXR5 827 aa16.69■□□□□ 0.26
VARS2-201ENST00000321897 RIOK1Q9BRS2 568 aaKnown RBP16.69■□□□□ 0.26
VARS2-201ENST00000321897 CD248Q9HCU0 757 aa16.69■□□□□ 0.26
VARS2-201ENST00000321897 KRT14P02533 472 aa16.69■□□□□ 0.26
VARS2-201ENST00000321897 PLEKP08567 350 aaPredicted RBP16.69■□□□□ 0.26
VARS2-201ENST00000321897 HNRNPH1P31943 449 aaKnown RBP16.69■□□□□ 0.26
VARS2-201ENST00000321897 DPYDQ12882 1025 aa16.69■□□□□ 0.26
VARS2-201ENST00000321897 IFI16Q16666 785 aaKnown RBP16.69■□□□□ 0.26
VARS2-201ENST00000321897 RUFY4Q6ZNE9 571 aa16.69■□□□□ 0.26
VARS2-201ENST00000321897 FMNL3Q8IVF7 1028 aa16.69■□□□□ 0.26
VARS2-201ENST00000321897 LRRC45Q96CN5 670 aa16.69■□□□□ 0.26
VARS2-201ENST00000321897 L1RE1Q9UN81 338 aa16.69■□□□□ 0.26
VARS2-201ENST00000321897 ATP6V0A2Q9Y487 856 aa16.69■□□□□ 0.26
VARS2-201ENST00000321897 WDR19Q8NEZ3 1342 aa16.69■□□□□ 0.26
VARS2-201ENST00000321897 GFPT2O94808 682 aa16.68■□□□□ 0.26
VARS2-201ENST00000321897 PLA2G4BP0C869 781 aa16.68■□□□□ 0.26
VARS2-201ENST00000321897 TCP1P17987 556 aaKnown RBP16.68■□□□□ 0.26
VARS2-201ENST00000321897 IRAK1P51617 712 aa16.68■□□□□ 0.26
VARS2-201ENST00000321897 EPHB4P54760 987 aa16.68■□□□□ 0.26
VARS2-201ENST00000321897 FKBP3Q00688 224 aaKnown RBP16.68■□□□□ 0.26
VARS2-201ENST00000321897 GRIK5Q16478 980 aa16.68■□□□□ 0.26
VARS2-201ENST00000321897 ODR4Q5SWX8 454 aa16.68■□□□□ 0.26
VARS2-201ENST00000321897 CNTNAP5Q8WYK1 1306 aa16.68■□□□□ 0.26
VARS2-201ENST00000321897 FOXP2O15409 715 aa16.68■□□□□ 0.26
VARS2-201ENST00000321897 DLATP10515 647 aaKnown RBP16.68■□□□□ 0.26
VARS2-201ENST00000321897 EMILIN3Q9NT22 766 aa16.68■□□□□ 0.26
VARS2-201ENST00000321897 HPSEQ9Y251 543 aa16.68■□□□□ 0.26
VARS2-201ENST00000321897 CHUKO15111 745 aa16.68■□□□□ 0.26
VARS2-201ENST00000321897 PCP11498 1178 aaKnown RBP16.68■□□□□ 0.26
VARS2-201ENST00000321897 NR1I3Q14994 352 aa16.68■□□□□ 0.26
VARS2-201ENST00000321897 CDC37Q16543 378 aaPredicted RBP16.68■□□□□ 0.26
VARS2-201ENST00000321897 CAPN12Q6ZSI9 719 aa16.68■□□□□ 0.26
VARS2-201ENST00000321897 TBC1D1Q86TI0 1168 aaPredicted RBP16.68■□□□□ 0.26
VARS2-201ENST00000321897 DHTKD1Q96HY7 919 aaPredicted RBP16.68■□□□□ 0.26
VARS2-201ENST00000321897 BARHL2Q9NY43 387 aa16.68■□□□□ 0.26
VARS2-201ENST00000321897 CEP83Q9Y592 693 aa16.68■□□□□ 0.26
VARS2-201ENST00000321897 PEAK1Q9H792 1746 aa16.67■□□□□ 0.26
VARS2-201ENST00000321897 LGALS16A8MUM7 142 aa16.67■□□□□ 0.26
VARS2-201ENST00000321897 ZRSR2Q15696 482 aaKnown RBP16.67■□□□□ 0.26
VARS2-201ENST00000321897 EXOC3L4Q17RC7 722 aa16.67■□□□□ 0.26
VARS2-201ENST00000321897 PPM1KQ8N3J5 372 aa16.67■□□□□ 0.26
VARS2-201ENST00000321897 OVOS2A0A0G2JMS6 1433 aa16.67■□□□□ 0.26
VARS2-201ENST00000321897 SALL1Q9NSC2 1324 aa16.67■□□□□ 0.26
VARS2-201ENST00000321897 ZBED6P86452 979 aa16.67■□□□□ 0.26
VARS2-201ENST00000321897 ZKSCAN8Q15776 578 aaPredicted RBP16.67■□□□□ 0.26
VARS2-201ENST00000321897 PKN1Q16512 942 aa16.67■□□□□ 0.26
VARS2-201ENST00000321897 NT5C3AQ9H0P0 336 aa16.67■□□□□ 0.26
VARS2-201ENST00000321897 ARHGEF10LQ9HCE6 1279 aa16.67■□□□□ 0.26
VARS2-201ENST00000321897 NOVA2Q9UNW9 492 aaKnown RBP16.67■□□□□ 0.26
VARS2-201ENST00000321897 GSTA5Q7RTV2 222 aa16.67■□□□□ 0.26
VARS2-201ENST00000321897 CCDC63Q8NA47 563 aa16.67■□□□□ 0.26
VARS2-201ENST00000321897 LRRC1Q9BTT6 524 aa16.67■□□□□ 0.26
VARS2-201ENST00000321897 TAOK3Q9H2K8 898 aa16.67■□□□□ 0.26
VARS2-201ENST00000321897 A0A1B0GTH6 734 aa16.66■□□□□ 0.26
VARS2-201ENST00000321897 SESN3P58005 492 aa16.66■□□□□ 0.26
VARS2-201ENST00000321897 MAN2A1Q16706 1144 aa16.66■□□□□ 0.26
VARS2-201ENST00000321897 SLCO1A2P46721 670 aa16.66■□□□□ 0.26
VARS2-201ENST00000321897 ARL6IP4Q66PJ3 421 aaKnown RBP16.66■□□□□ 0.26
VARS2-201ENST00000321897 JDP2Q8WYK2 163 aa16.66■□□□□ 0.26
VARS2-201ENST00000321897 AMNQ9BXJ7 453 aa16.66■□□□□ 0.26
VARS2-201ENST00000321897 TRIM9Q9C026 710 aa16.66■□□□□ 0.26
VARS2-201ENST00000321897 GOLGA8IPA6NC78 632 aa16.66■□□□□ 0.26
VARS2-201ENST00000321897 GOLGA8JA6NMD2 632 aa16.66■□□□□ 0.26
VARS2-201ENST00000321897 KRIT1O00522 736 aa16.66■□□□□ 0.26
VARS2-201ENST00000321897 CTNND1O60716 968 aaKnown RBP16.66■□□□□ 0.26
VARS2-201ENST00000321897 PCDHA13Q9Y5I0 950 aa16.66■□□□□ 0.26
VARS2-201ENST00000321897 A6NNZ2 444 aa16.65■□□□□ 0.26
VARS2-201ENST00000321897 RASA1P20936 1047 aa16.65■□□□□ 0.26
VARS2-201ENST00000321897 STAT1P42224 750 aa16.65■□□□□ 0.26
VARS2-201ENST00000321897 TUBB8Q3ZCM7 444 aa16.65■□□□□ 0.26
VARS2-201ENST00000321897 VSIG1Q86XK7 387 aa16.65■□□□□ 0.26
VARS2-201ENST00000321897 ADGRF4Q8IZF3 695 aa16.65■□□□□ 0.26
VARS2-201ENST00000321897 ANKZF1Q9H8Y5 726 aa16.65■□□□□ 0.26
VARS2-201ENST00000321897 RGL1Q9NZL6 768 aa16.65■□□□□ 0.26
VARS2-201ENST00000321897 RABGAP1Q9Y3P9 1069 aa16.65■□□□□ 0.26
VARS2-201ENST00000321897 PPP1R3GB7ZBB8 358 aa16.65■□□□□ 0.26
VARS2-201ENST00000321897 KCNJ6P48051 423 aa16.65■□□□□ 0.26
VARS2-201ENST00000321897 PMS1P54277 932 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms