RNA–Protein interactions for RNA: ENST00000320857.7

SSR4-201, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSR4, Length 1,671 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-201ENST00000320857 MTMR2Q13614 643 aa18.91■□□□□ 0.62
SSR4-201ENST00000320857 CEP55Q53EZ4 464 aa18.91■□□□□ 0.62
SSR4-201ENST00000320857 FAM26FQ5R3K3 315 aa18.91■□□□□ 0.62
SSR4-201ENST00000320857 PRAMEF18Q5VWM3 479 aa18.91■□□□□ 0.62
SSR4-201ENST00000320857 POTEGQ6S5H5 508 aa18.91■□□□□ 0.62
SSR4-201ENST00000320857 POTEEQ6S8J3 1075 aa18.91■□□□□ 0.62
SSR4-201ENST00000320857 MB21D1Q8N884 522 aa18.91■□□□□ 0.62
SSR4-201ENST00000320857 SLC5A5Q92911 643 aa18.91■□□□□ 0.62
SSR4-201ENST00000320857 CNOT6LQ96LI5 555 aaKnown RBP18.91■□□□□ 0.62
SSR4-201ENST00000320857 WRNIP1Q96S55 665 aa18.91■□□□□ 0.62
SSR4-201ENST00000320857 SLC38A10Q9HBR0 1119 aa18.91■□□□□ 0.62
SSR4-201ENST00000320857 ADARB2Q9NS39 739 aaKnown RBP18.91■□□□□ 0.62
SSR4-201ENST00000320857 PPP1R9AQ9ULJ8 1098 aa18.91■□□□□ 0.62
SSR4-201ENST00000320857 MFAP3LO75121 409 aa18.9■□□□□ 0.62
SSR4-201ENST00000320857 ZBED4O75132 1171 aa18.9■□□□□ 0.62
SSR4-201ENST00000320857 FLOT1O75955 427 aa18.9■□□□□ 0.62
SSR4-201ENST00000320857 KIF20AO95235 890 aa18.9■□□□□ 0.62
SSR4-201ENST00000320857 SPATA31C1P0DKV0 1188 aa18.9■□□□□ 0.62
SSR4-201ENST00000320857 CYP11B2P19099 503 aa18.9■□□□□ 0.62
SSR4-201ENST00000320857 VCAM1P19320 739 aa18.9■□□□□ 0.62
SSR4-201ENST00000320857 DNM2P50570 870 aa18.9■□□□□ 0.62
SSR4-201ENST00000320857 SLC12A3P55017 1021 aa18.9■□□□□ 0.62
SSR4-201ENST00000320857 GHRHRQ02643 423 aa18.9■□□□□ 0.62
SSR4-201ENST00000320857 SUPT20HL1Q3ZLR7 823 aa18.9■□□□□ 0.62
SSR4-201ENST00000320857 LRCH2Q5VUJ6 765 aa18.9■□□□□ 0.62
SSR4-201ENST00000320857 MYOCDQ8IZQ8 938 aa18.9■□□□□ 0.62
SSR4-201ENST00000320857 TUBGCP2Q9BSJ2 902 aa18.9■□□□□ 0.62
SSR4-201ENST00000320857 EMILIN3Q9NT22 766 aa18.9■□□□□ 0.62
SSR4-201ENST00000320857 MAP3K20Q9NYL2 800 aaKnown RBP18.9■□□□□ 0.62
SSR4-201ENST00000320857 PRKCSHP14314 528 aaPredicted RBP18.89■□□□□ 0.61
SSR4-201ENST00000320857 PTPRAP18433 802 aa18.89■□□□□ 0.61
SSR4-201ENST00000320857 MTIF2P46199 727 aaKnown RBP18.89■□□□□ 0.61
SSR4-201ENST00000320857 PPP2R5CQ13362 524 aa18.89■□□□□ 0.61
SSR4-201ENST00000320857 KRT26Q7Z3Y9 468 aa18.89■□□□□ 0.61
SSR4-201ENST00000320857 SYT2Q8N9I0 419 aaPredicted RBP18.89■□□□□ 0.61
SSR4-201ENST00000320857 CPLX3Q8WVH0 158 aa18.89■□□□□ 0.61
SSR4-201ENST00000320857 CLEC4DQ8WXI8 215 aa18.89■□□□□ 0.61
SSR4-201ENST00000320857 ZKSCAN4Q969J2 545 aaPredicted RBP18.89■□□□□ 0.61
SSR4-201ENST00000320857 KLRG1Q96E93 195 aa18.89■□□□□ 0.61
SSR4-201ENST00000320857 EIF2AK1Q9BQI3 630 aaKnown RBP18.89■□□□□ 0.61
SSR4-201ENST00000320857 RPAP3Q9H6T3 665 aaPredicted RBP18.89■□□□□ 0.61
SSR4-201ENST00000320857 TUFT1Q9NNX1 390 aa18.89■□□□□ 0.61
SSR4-201ENST00000320857 NMRK2Q9NPI5 230 aa18.89■□□□□ 0.61
SSR4-201ENST00000320857 SSC5DA1L4H1 1573 aa18.89■□□□□ 0.61
SSR4-201ENST00000320857 GOLGA6L9A6NEM1 432 aa18.89■□□□□ 0.61
SSR4-201ENST00000320857 MEIS1O00470 390 aa18.89■□□□□ 0.61
SSR4-201ENST00000320857 PES1O00541 588 aaKnown RBP18.89■□□□□ 0.61
SSR4-201ENST00000320857 DYNC1I1O14576 645 aa18.89■□□□□ 0.61
SSR4-201ENST00000320857 PSMD10O75832 226 aa18.89■□□□□ 0.61
SSR4-201ENST00000320857 GYPCP04921 128 aa18.89■□□□□ 0.61
SSR4-201ENST00000320857 CASP14P31944 242 aa18.89■□□□□ 0.61
SSR4-201ENST00000320857 BACE1P56817 501 aa18.89■□□□□ 0.61
SSR4-201ENST00000320857 SPP2Q13103 211 aa18.89■□□□□ 0.61
SSR4-201ENST00000320857 OTOP1Q7RTM1 612 aa18.89■□□□□ 0.61
SSR4-201ENST00000320857 ZNF280CQ8ND82 737 aa18.89■□□□□ 0.61
SSR4-201ENST00000320857 ZNF507Q8TCN5 953 aa18.89■□□□□ 0.61
SSR4-201ENST00000320857 WDR11Q9BZH6 1224 aa18.89■□□□□ 0.61
SSR4-201ENST00000320857 POLR2AP24928 1970 aaKnown RBP18.88■□□□□ 0.61
SSR4-201ENST00000320857 RPTORQ8N122 1335 aa18.88■□□□□ 0.61
SSR4-201ENST00000320857 FRMD3A2A2Y4 597 aa18.88■□□□□ 0.61
SSR4-201ENST00000320857 GAS7O60861 476 aa18.88■□□□□ 0.61
SSR4-201ENST00000320857 ALAS1P13196 640 aa18.88■□□□□ 0.61
SSR4-201ENST00000320857 MUTP22033 750 aa18.88■□□□□ 0.61
SSR4-201ENST00000320857 GTF2F1P35269 517 aaKnown RBP eCLIP18.88■□□□□ 0.61
SSR4-201ENST00000320857 UBXN2AP68543 259 aa18.88■□□□□ 0.61
SSR4-201ENST00000320857 NOL9Q5SY16 702 aaKnown RBP18.88■□□□□ 0.61
SSR4-201ENST00000320857 CPXCR1Q8N123 301 aa18.88■□□□□ 0.61
SSR4-201ENST00000320857 KIF18AQ8NI77 898 aa18.88■□□□□ 0.61
SSR4-201ENST00000320857 ZNF592Q92610 1267 aa18.88■□□□□ 0.61
SSR4-201ENST00000320857 MXRA8Q9BRK3 442 aa18.88■□□□□ 0.61
SSR4-201ENST00000320857 RAVER2Q9HCJ3 691 aaKnown RBP18.88■□□□□ 0.61
SSR4-201ENST00000320857 PPP2R2CQ9Y2T4 447 aa18.88■□□□□ 0.61
SSR4-201ENST00000320857 RIOK3O14730 519 aaKnown RBP18.87■□□□□ 0.61
SSR4-201ENST00000320857 EYA4O95677 639 aa18.87■□□□□ 0.61
SSR4-201ENST00000320857 PABPC4Q13310 644 aaKnown RBP eCLIP18.87■□□□□ 0.618e-9■■■■■ 32
SSR4-201ENST00000320857 HERC4Q5GLZ8 1057 aaPredicted RBP18.87■□□□□ 0.61
SSR4-201ENST00000320857 NIPA1Q7RTP0 329 aa18.87■□□□□ 0.61
SSR4-201ENST00000320857 L3MBTL3Q96JM7 780 aaPredicted RBP18.87■□□□□ 0.61
SSR4-201ENST00000320857 ZNF577Q9BSK1 485 aa18.87■□□□□ 0.61
SSR4-201ENST00000320857 NOC4LQ9BVI4 516 aaKnown RBP18.87■□□□□ 0.61
SSR4-201ENST00000320857 TEKT3Q9BXF9 490 aa18.87■□□□□ 0.61
SSR4-201ENST00000320857 PHIPQ8WWQ0 1821 aa18.86■□□□□ 0.61
SSR4-201ENST00000320857 B4DLN1 442 aa18.86■□□□□ 0.61
SSR4-201ENST00000320857 EML1O00423 815 aa18.86■□□□□ 0.61
SSR4-201ENST00000320857 NFIBO00712 420 aa18.86■□□□□ 0.61
SSR4-201ENST00000320857 FECHP22830 423 aa18.86■□□□□ 0.61
SSR4-201ENST00000320857 FXR1P51114 621 aaKnown RBP eCLIP18.86■□□□□ 0.61
SSR4-201ENST00000320857 PSMC6P62333 389 aa18.86■□□□□ 0.61
SSR4-201ENST00000320857 DGKZQ13574 1117 aa18.86■□□□□ 0.61
SSR4-201ENST00000320857 LRRC41Q15345 812 aa18.86■□□□□ 0.61
SSR4-201ENST00000320857 EAPPQ56P03 285 aaPredicted RBP18.86■□□□□ 0.61
SSR4-201ENST00000320857 ARSHQ5FYA8 562 aa18.86■□□□□ 0.61
SSR4-201ENST00000320857 FKBP15Q5T1M5 1219 aa18.86■□□□□ 0.61
SSR4-201ENST00000320857 C12orf42Q96LP6 360 aa18.86■□□□□ 0.61
SSR4-201ENST00000320857 NUP58Q9BVL2 599 aa18.86■□□□□ 0.61
SSR4-201ENST00000320857 GPBP1L1Q9HC44 474 aaPredicted RBP18.86■□□□□ 0.61
SSR4-201ENST00000320857 PCDHA2Q9Y5H9 948 aa18.86■□□□□ 0.61
SSR4-201ENST00000320857 NPHP3-ACAD11A0A0J9YXS1 232 aa18.85■□□□□ 0.61
SSR4-201ENST00000320857 C19orf81C9J6K1 198 aa18.85■□□□□ 0.61
SSR4-201ENST00000320857 BCRP11274 1271 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms