RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 SMCR8Q8TEV9 937 aaPredicted RBP22.86■■□□□ 1.25
TTC39C-202ENST00000317571 PURBQ96QR8 312 aaKnown RBP22.86■■□□□ 1.25
TTC39C-202ENST00000317571 TUBB2BQ9BVA1 445 aa22.86■■□□□ 1.25
TTC39C-202ENST00000317571 COL4A5P29400 1685 aa22.85■■□□□ 1.25
TTC39C-202ENST00000317571 PSME4Q14997 1843 aa22.85■■□□□ 1.25
TTC39C-202ENST00000317571 FRMD3A2A2Y4 597 aa22.85■■□□□ 1.25
TTC39C-202ENST00000317571 MEIS1O00470 390 aa22.85■■□□□ 1.25
TTC39C-202ENST00000317571 SRGAP2O75044 1071 aa22.85■■□□□ 1.25
TTC39C-202ENST00000317571 SREBF1P36956 1147 aa22.85■■□□□ 1.25
TTC39C-202ENST00000317571 CASP5P51878 434 aa22.85■■□□□ 1.25
TTC39C-202ENST00000317571 IKQ13123 557 aaPredicted RBP22.85■■□□□ 1.25
TTC39C-202ENST00000317571 Q4G0T1 1027 aa22.85■■□□□ 1.25
TTC39C-202ENST00000317571 BTNL9Q6UXG8 535 aa22.85■■□□□ 1.25
TTC39C-202ENST00000317571 CNKSR1Q969H4 720 aa22.85■■□□□ 1.25
TTC39C-202ENST00000317571 KCTD10Q9H3F6 313 aa22.85■■□□□ 1.25
TTC39C-202ENST00000317571 LRRC53A6NM62 1247 aa22.84■■□□□ 1.25
TTC39C-202ENST00000317571 RBM26Q5T8P6 1007 aaKnown RBP22.84■■□□□ 1.25
TTC39C-202ENST00000317571 SLC30A10Q6XR72 485 aa22.84■■□□□ 1.25
TTC39C-202ENST00000317571 BCAS3Q9H6U6 928 aa22.84■■□□□ 1.25
TTC39C-202ENST00000317571 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.84■■□□□ 1.25
TTC39C-202ENST00000317571 PRR12Q9ULL5 1215 aa22.84■■□□□ 1.25
TTC39C-202ENST00000317571 PPIP5K2O43314 1243 aa22.84■■□□□ 1.25
TTC39C-202ENST00000317571 CDAN1Q8IWY9 1227 aa22.84■■□□□ 1.25
TTC39C-202ENST00000317571 ACER1Q8TDN7 264 aa22.84■■□□□ 1.25
TTC39C-202ENST00000317571 TSG101Q99816 390 aa22.84■■□□□ 1.25
TTC39C-202ENST00000317571 FUT8Q9BYC5 575 aa22.84■■□□□ 1.25
TTC39C-202ENST00000317571 UBXN6Q9BZV1 441 aa22.84■■□□□ 1.25
TTC39C-202ENST00000317571 COL4A3BPQ9Y5P4 624 aa22.84■■□□□ 1.25
TTC39C-202ENST00000317571 COL2A1P02458 1487 aaPredicted RBP22.84■■□□□ 1.25
TTC39C-202ENST00000317571 CLRN2A0PK11 232 aa22.83■■□□□ 1.25
TTC39C-202ENST00000317571 TCP10L2B9ZVM9 353 aa22.83■■□□□ 1.25
TTC39C-202ENST00000317571 TRAF5O00463 557 aa22.83■■□□□ 1.25
TTC39C-202ENST00000317571 C21orf2O43822 256 aa22.83■■□□□ 1.25
TTC39C-202ENST00000317571 FKBP3Q00688 224 aaKnown RBP22.83■■□□□ 1.25
TTC39C-202ENST00000317571 APBA1Q02410 837 aa22.83■■□□□ 1.25
TTC39C-202ENST00000317571 HERC4Q5GLZ8 1057 aaPredicted RBP22.83■■□□□ 1.25
TTC39C-202ENST00000317571 SLFN12Q8IYM2 578 aa22.83■■□□□ 1.25
TTC39C-202ENST00000317571 RAB21Q9UL25 225 aa22.83■■□□□ 1.25
TTC39C-202ENST00000317571 MSH4O15457 936 aa22.83■■□□□ 1.25
TTC39C-202ENST00000317571 FGFR1OPO95684 399 aaKnown RBP22.83■■□□□ 1.25
TTC39C-202ENST00000317571 RHOXF2BP0C7M4 288 aa22.83■■□□□ 1.25
TTC39C-202ENST00000317571 RHOXF2Q9BQY4 288 aa22.83■■□□□ 1.25
TTC39C-202ENST00000317571 VAV3Q9UKW4 847 aa22.83■■□□□ 1.25
TTC39C-202ENST00000317571 CCDC151A5D8V7 595 aa22.82■■□□□ 1.24
TTC39C-202ENST00000317571 NOL4O94818 638 aa22.82■■□□□ 1.24
TTC39C-202ENST00000317571 EIF4A3P38919 411 aaKnown RBP22.82■■□□□ 1.24
TTC39C-202ENST00000317571 VAV2P52735 878 aa22.82■■□□□ 1.24
TTC39C-202ENST00000317571 PAPD7Q5XG87 772 aaKnown RBP22.82■■□□□ 1.24
TTC39C-202ENST00000317571 CC2D2BQ6DHV5 1058 aa22.82■■□□□ 1.24
TTC39C-202ENST00000317571 RRAGAQ7L523 313 aa22.82■■□□□ 1.24
TTC39C-202ENST00000317571 CCDC65Q8IXS2 484 aa22.82■■□□□ 1.24
TTC39C-202ENST00000317571 TBC1D5Q92609 795 aa22.82■■□□□ 1.24
TTC39C-202ENST00000317571 CTAGE15A4D2H0 777 aa22.82■■□□□ 1.24
TTC39C-202ENST00000317571 KRT86O43790 486 aa22.82■■□□□ 1.24
TTC39C-202ENST00000317571 CTAGE8P0CG41 777 aa22.82■■□□□ 1.24
TTC39C-202ENST00000317571 PABPC4Q13310 644 aaKnown RBP eCLIP22.82■■□□□ 1.24
TTC39C-202ENST00000317571 LONRF2Q1L5Z9 754 aa22.82■■□□□ 1.24
TTC39C-202ENST00000317571 CTAGE6Q86UF2 777 aa22.82■■□□□ 1.24
TTC39C-202ENST00000317571 CTAGE4Q8IX94 777 aa22.82■■□□□ 1.24
TTC39C-202ENST00000317571 CCDC42Q96M95 316 aa22.82■■□□□ 1.24
TTC39C-202ENST00000317571 ARFGAP3Q9NP61 516 aa22.82■■□□□ 1.24
TTC39C-202ENST00000317571 BMP2KQ9NSY1 1161 aaPredicted RBP22.82■■□□□ 1.24
TTC39C-202ENST00000317571 MACROD2A1Z1Q3 448 aa22.81■■□□□ 1.24
TTC39C-202ENST00000317571 SPDYE3A6NKU9 549 aa22.81■■□□□ 1.24
TTC39C-202ENST00000317571 HOXA7P31268 230 aaPredicted RBP22.81■■□□□ 1.24
TTC39C-202ENST00000317571 KIF11P52732 1056 aa22.81■■□□□ 1.24
TTC39C-202ENST00000317571 GIT2Q14161 759 aa22.81■■□□□ 1.24
TTC39C-202ENST00000317571 MMS19Q96T76 1030 aa22.81■■□□□ 1.24
TTC39C-202ENST00000317571 PDGFDQ9GZP0 370 aaPredicted RBP22.81■■□□□ 1.24
TTC39C-202ENST00000317571 EMILIN3Q9NT22 766 aa22.81■■□□□ 1.24
TTC39C-202ENST00000317571 CIITAP33076 1130 aa22.81■■□□□ 1.24
TTC39C-202ENST00000317571 HOXD13P35453 343 aa22.81■■□□□ 1.24
TTC39C-202ENST00000317571 PDXDC1Q6P996 788 aa22.81■■□□□ 1.24
TTC39C-202ENST00000317571 CCDC84Q86UT8 332 aaPredicted RBP22.81■■□□□ 1.24
TTC39C-202ENST00000317571 ZC3H3Q8IXZ2 948 aaKnown RBP22.81■■□□□ 1.24
TTC39C-202ENST00000317571 TANGO6Q9C0B7 1094 aa22.81■■□□□ 1.24
TTC39C-202ENST00000317571 SPDYE2BA6NHP3 402 aa22.8■■□□□ 1.24
TTC39C-202ENST00000317571 EML1O00423 815 aa22.8■■□□□ 1.24
TTC39C-202ENST00000317571 TBX3O15119 743 aa22.8■■□□□ 1.24
TTC39C-202ENST00000317571 SPDYE6P0CI01 402 aa22.8■■□□□ 1.24
TTC39C-202ENST00000317571 RPA1P27694 616 aa22.8■■□□□ 1.24
TTC39C-202ENST00000317571 VSNL1P62760 191 aa22.8■■□□□ 1.24
TTC39C-202ENST00000317571 CCDC40Q4G0X9 1142 aa22.8■■□□□ 1.24
TTC39C-202ENST00000317571 HGSNATQ68CP4 663 aa22.8■■□□□ 1.24
TTC39C-202ENST00000317571 TRIM59Q8IWR1 403 aa22.8■■□□□ 1.24
TTC39C-202ENST00000317571 IQCDQ96DY2 449 aa22.8■■□□□ 1.24
TTC39C-202ENST00000317571 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.8■■□□□ 1.24
TTC39C-202ENST00000317571 POLD4Q9HCU8 107 aa22.8■■□□□ 1.24
TTC39C-202ENST00000317571 CAPN6Q9Y6Q1 641 aa22.8■■□□□ 1.24
TTC39C-202ENST00000317571 CNTNAP1P78357 1384 aa22.8■■□□□ 1.24
TTC39C-202ENST00000317571 IGLV3-22A0A075B6J6 115 aa22.8■■□□□ 1.24
TTC39C-202ENST00000317571 ATP8B1O43520 1251 aa22.8■■□□□ 1.24
TTC39C-202ENST00000317571 LCA5LO95447 670 aa22.8■■□□□ 1.24
TTC39C-202ENST00000317571 POLD1P28340 1107 aa22.8■■□□□ 1.24
TTC39C-202ENST00000317571 CYP4A11Q02928 519 aa22.8■■□□□ 1.24
TTC39C-202ENST00000317571 BRD3Q15059 726 aa22.8■■□□□ 1.24
TTC39C-202ENST00000317571 ASTE1Q2TB18 679 aaPredicted RBP22.8■■□□□ 1.24
TTC39C-202ENST00000317571 BEND6Q5SZJ8 279 aaPredicted RBP22.8■■□□□ 1.24
TTC39C-202ENST00000317571 HAUS3Q68CZ6 603 aa22.8■■□□□ 1.24
TTC39C-202ENST00000317571 REEP2Q9BRK0 252 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms