RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 MARCH10Q8NA82 808 aaPredicted RBP9.41□□□□□ -0.9
USF3-201ENST00000316407 TMEM87BQ96K49 555 aa9.41□□□□□ -0.9
USF3-201ENST00000316407 CHMP2BQ9UQN3 213 aa9.41□□□□□ -0.9
USF3-201ENST00000316407 ATP11BQ9Y2G3 1177 aa9.41□□□□□ -0.9
USF3-201ENST00000316407 ZBTB7BO15156 539 aaPredicted RBP9.41□□□□□ -0.9
USF3-201ENST00000316407 RBM6P78332 1123 aaKnown RBP9.41□□□□□ -0.9
USF3-201ENST00000316407 DNAAF3Q8N9W5 541 aa9.41□□□□□ -0.9
USF3-201ENST00000316407 NR1H4Q96RI1 486 aaPredicted RBP9.41□□□□□ -0.9
USF3-201ENST00000316407 MTMR6Q9Y217 621 aa9.41□□□□□ -0.9
USF3-201ENST00000316407 ADCY3O60266 1144 aa9.41□□□□□ -0.9
USF3-201ENST00000316407 NSFP46459 744 aaKnown RBP9.41□□□□□ -0.9
USF3-201ENST00000316407 SETDB2Q96T68 719 aa9.41□□□□□ -0.9
USF3-201ENST00000316407 ZMYM6O95789 1325 aa9.41□□□□□ -0.9
USF3-201ENST00000316407 ATP2B4P23634 1241 aa9.41□□□□□ -0.9
USF3-201ENST00000316407 MYL7Q01449 175 aa9.41□□□□□ -0.9
USF3-201ENST00000316407 KRT25Q7Z3Z0 450 aa9.41□□□□□ -0.9
USF3-201ENST00000316407 COG4Q9H9E3 785 aa9.41□□□□□ -0.9
USF3-201ENST00000316407 VAMP4O75379 141 aa9.41□□□□□ -0.9
USF3-201ENST00000316407 SCRN1Q12765 414 aa9.41□□□□□ -0.9
USF3-201ENST00000316407 VSTM4Q8IW00 320 aa9.41□□□□□ -0.9
USF3-201ENST00000316407 XAGE2Q96GT9 111 aa9.41□□□□□ -0.9
USF3-201ENST00000316407 CHRNA2Q15822 529 aa9.41□□□□□ -0.9
USF3-201ENST00000316407 EDEM3Q9BZQ6 932 aa9.41□□□□□ -0.9
USF3-201ENST00000316407 MORF4L2Q15014 288 aa9.41□□□□□ -0.9
USF3-201ENST00000316407 GALNT4Q8N4A0 578 aa9.41□□□□□ -0.9
USF3-201ENST00000316407 KIF2BQ8N4N8 673 aa9.41□□□□□ -0.9
USF3-201ENST00000316407 L3MBTL1Q9Y468 752 aa9.41□□□□□ -0.9
USF3-201ENST00000316407 TMEM154Q6P9G4 183 aa9.41□□□□□ -0.9
USF3-201ENST00000316407 KRT8P05787 483 aa9.41□□□□□ -0.9
USF3-201ENST00000316407 FSCBQ5H9T9 825 aa9.41□□□□□ -0.9
USF3-201ENST00000316407 CCDC103Q8IW40 242 aa9.41□□□□□ -0.9
USF3-201ENST00000316407 GINM1Q9NU53 330 aa9.41□□□□□ -0.9
USF3-201ENST00000316407 TBC1D23Q9NUY8 699 aa9.41□□□□□ -0.9
USF3-201ENST00000316407 ZNF532Q9HCE3 1301 aa9.41□□□□□ -0.9
USF3-201ENST00000316407 CCNYQ8ND76 341 aa9.41□□□□□ -0.9
USF3-201ENST00000316407 ALG13Q9NP73 1137 aaKnown RBP9.41□□□□□ -0.9
USF3-201ENST00000316407 DDX25Q9UHL0 483 aaKnown RBP9.41□□□□□ -0.9
USF3-201ENST00000316407 NIP7Q9Y221 180 aaKnown RBP eCLIP9.41□□□□□ -0.9
USF3-201ENST00000316407 PCDHB4Q9Y5E5 795 aa9.41□□□□□ -0.9
USF3-201ENST00000316407 RNF103-CHMP3A0A140T963 221 aa9.4□□□□□ -0.9
USF3-201ENST00000316407 ARHGAP10A1A4S6 786 aa9.4□□□□□ -0.9
USF3-201ENST00000316407 GAS7O60861 476 aa9.4□□□□□ -0.9
USF3-201ENST00000316407 ZNF507Q8TCN5 953 aa9.4□□□□□ -0.9
USF3-201ENST00000316407 DTNBP1Q96EV8 351 aa9.4□□□□□ -0.9
USF3-201ENST00000316407 IBTKQ9P2D0 1353 aaPredicted RBP9.4□□□□□ -0.9
USF3-201ENST00000316407 GMNCA6NCL1 334 aa9.4□□□□□ -0.9
USF3-201ENST00000316407 HSPA8P11142 646 aaKnown RBP9.4□□□□□ -0.9
USF3-201ENST00000316407 PLCG2P16885 1265 aa9.4□□□□□ -0.9
USF3-201ENST00000316407 PTGDRQ13258 359 aa9.4□□□□□ -0.9
USF3-201ENST00000316407 ADCK1Q86TW2 530 aa9.4□□□□□ -0.9
USF3-201ENST00000316407 SMCR8Q8TEV9 937 aaPredicted RBP9.4□□□□□ -0.9
USF3-201ENST00000316407 DMRT2Q9Y5R5 561 aa9.4□□□□□ -0.9
USF3-201ENST00000316407 EIF3BP55884 814 aaKnown RBP9.4□□□□□ -0.9
USF3-201ENST00000316407 KRT17Q04695 432 aa9.4□□□□□ -0.9
USF3-201ENST00000316407 RBM26Q5T8P6 1007 aaKnown RBP9.4□□□□□ -0.9
USF3-201ENST00000316407 TRIM42Q8IWZ5 723 aa9.4□□□□□ -0.9
USF3-201ENST00000316407 SH2D3CQ8N5H7 860 aa9.4□□□□□ -0.9
USF3-201ENST00000316407 ZCWPW1Q9H0M4 648 aa9.4□□□□□ -0.9
USF3-201ENST00000316407 CARD9Q9H257 536 aa9.4□□□□□ -0.9
USF3-201ENST00000316407 WASLO00401 505 aaPredicted RBP9.4□□□□□ -0.9
USF3-201ENST00000316407 WDR47O94967 919 aa9.4□□□□□ -0.9
USF3-201ENST00000316407 RPS6P62753 249 aaKnown RBP9.4□□□□□ -0.9
USF3-201ENST00000316407 GSDMAQ96QA5 445 aa9.4□□□□□ -0.9
USF3-201ENST00000316407 CHCHD3Q9NX63 227 aaKnown RBP9.4□□□□□ -0.9
USF3-201ENST00000316407 ARIH1Q9Y4X5 557 aaPredicted RBP9.4□□□□□ -0.9
USF3-201ENST00000316407 SNX5Q9Y5X3 404 aa9.4□□□□□ -0.9
USF3-201ENST00000316407 ABCC1P33527 1531 aa9.4□□□□□ -0.9
USF3-201ENST00000316407 PRR23D1E9PI22 279 aaPredicted RBP9.4□□□□□ -0.9
USF3-201ENST00000316407 SKAP2O75563 359 aaPredicted RBP9.4□□□□□ -0.9
USF3-201ENST00000316407 CFBP00751 764 aa9.4□□□□□ -0.9
USF3-201ENST00000316407 PRR23D2P0DMB1 279 aaPredicted RBP9.4□□□□□ -0.9
USF3-201ENST00000316407 FAM89AQ96GI7 184 aa9.4□□□□□ -0.9
USF3-201ENST00000316407 MAP3K5Q99683 1374 aa9.4□□□□□ -0.9
USF3-201ENST00000316407 ATP6V1B1P15313 513 aa9.4□□□□□ -0.9
USF3-201ENST00000316407 KLC2Q9H0B6 622 aa9.4□□□□□ -0.9
USF3-201ENST00000316407 MORC2Q9Y6X9 1032 aaPredicted RBP9.4□□□□□ -0.9
USF3-201ENST00000316407 BTBD18B2RXH4 712 aa9.4□□□□□ -0.9
USF3-201ENST00000316407 ZSCAN9O15535 394 aaPredicted RBP9.4□□□□□ -0.9
USF3-201ENST00000316407 TSC22D2O75157 780 aa9.4□□□□□ -0.9
USF3-201ENST00000316407 H2AFZP0C0S5 128 aa9.4□□□□□ -0.9
USF3-201ENST00000316407 H2AFVQ71UI9 128 aa9.4□□□□□ -0.9
USF3-201ENST00000316407 BBOF1Q8ND07 529 aa9.4□□□□□ -0.9
USF3-201ENST00000316407 CNGB3Q9NQW8 809 aa9.4□□□□□ -0.9
USF3-201ENST00000316407 HACD3Q9P035 362 aa9.4□□□□□ -0.9
USF3-201ENST00000316407 H7C1D1 291 aa9.4□□□□□ -0.9
USF3-201ENST00000316407 XPO1O14980 1071 aaKnown RBP9.4□□□□□ -0.9
USF3-201ENST00000316407 PALMO75781 387 aa9.4□□□□□ -0.9
USF3-201ENST00000316407 NR2F2P24468 414 aa9.4□□□□□ -0.9
USF3-201ENST00000316407 KDSRQ06136 332 aa9.4□□□□□ -0.9
USF3-201ENST00000316407 KLC1Q07866 573 aa9.4□□□□□ -0.9
USF3-201ENST00000316407 CDAN1Q8IWY9 1227 aa9.4□□□□□ -0.9
USF3-201ENST00000316407 SMAD5Q99717 465 aaKnown RBP9.4□□□□□ -0.9
USF3-201ENST00000316407 PPP2R2AP63151 447 aa9.4□□□□□ -0.91
USF3-201ENST00000316407 EMBQ6PCB8 327 aa9.4□□□□□ -0.91
USF3-201ENST00000316407 EXOC8Q8IYI6 725 aa9.4□□□□□ -0.91
USF3-201ENST00000316407 KIRREL3Q8IZU9 778 aa9.4□□□□□ -0.91
USF3-201ENST00000316407 THAP11Q96EK4 314 aa9.4□□□□□ -0.91
USF3-201ENST00000316407 KIF11P52732 1056 aa9.4□□□□□ -0.91
USF3-201ENST00000316407 HDAC4P56524 1084 aa9.4□□□□□ -0.91
USF3-201ENST00000316407 SPARCL1Q14515 664 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms