RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 NCAPHQ15003 741 aa12.8□□□□□ -0.36
LDLRAD3-201ENST00000315571 CCDC178Q5BJE1 867 aa12.8□□□□□ -0.36
LDLRAD3-201ENST00000315571 RSBN1LQ6PCB5 846 aaPredicted RBP12.8□□□□□ -0.36
LDLRAD3-201ENST00000315571 CCDC155Q8N6L0 562 aa12.8□□□□□ -0.36
LDLRAD3-201ENST00000315571 AGAP11Q8TF27 550 aa12.8□□□□□ -0.36
LDLRAD3-201ENST00000315571 UBLCP1Q8WVY7 318 aaPredicted RBP12.8□□□□□ -0.36
LDLRAD3-201ENST00000315571 ZIM3Q96PE6 472 aa12.8□□□□□ -0.36
LDLRAD3-201ENST00000315571 DNAAF2Q9NVR5 837 aaKnown RBP12.8□□□□□ -0.36
LDLRAD3-201ENST00000315571 GALNT8Q9NY28 637 aa12.8□□□□□ -0.36
LDLRAD3-201ENST00000315571 RTEL1Q9NZ71 1219 aa12.8□□□□□ -0.36
LDLRAD3-201ENST00000315571 RNF181Q9P0P0 153 aa12.8□□□□□ -0.36
LDLRAD3-201ENST00000315571 PCDHA5Q9Y5H7 936 aa12.8□□□□□ -0.36
LDLRAD3-201ENST00000315571 GJA3Q9Y6H8 435 aa12.8□□□□□ -0.36
LDLRAD3-201ENST00000315571 CCDC160A6NGH7 325 aa12.79□□□□□ -0.36
LDLRAD3-201ENST00000315571 AGPSO00116 658 aa12.79□□□□□ -0.36
LDLRAD3-201ENST00000315571 ATP1A1P05023 1023 aaKnown RBP12.79□□□□□ -0.36
LDLRAD3-201ENST00000315571 CCDC92Q53HC0 331 aaPredicted RBP12.79□□□□□ -0.36
LDLRAD3-201ENST00000315571 CHST3Q7LGC8 479 aa12.79□□□□□ -0.36
LDLRAD3-201ENST00000315571 ADGRA1Q86SQ6 560 aa12.79□□□□□ -0.36
LDLRAD3-201ENST00000315571 H0Y3Z8 333 aa12.79□□□□□ -0.36
LDLRAD3-201ENST00000315571 CXCR5P32302 372 aa12.79□□□□□ -0.36
LDLRAD3-201ENST00000315571 SPA17Q15506 151 aa12.79□□□□□ -0.36
LDLRAD3-201ENST00000315571 OGFOD1Q8N543 542 aa12.79□□□□□ -0.36
LDLRAD3-201ENST00000315571 ZNF384Q8TF68 577 aa12.79□□□□□ -0.36
LDLRAD3-201ENST00000315571 TEKT1Q969V4 418 aa12.79□□□□□ -0.36
LDLRAD3-201ENST00000315571 BPIFA3Q9BQP9 254 aa12.79□□□□□ -0.36
LDLRAD3-201ENST00000315571 FAM114A2Q9NRY5 505 aa12.79□□□□□ -0.36
LDLRAD3-201ENST00000315571 SCOCQ9UIL1 159 aa12.79□□□□□ -0.36
LDLRAD3-201ENST00000315571 HDAC9Q9UKV0 1011 aa12.79□□□□□ -0.36
LDLRAD3-201ENST00000315571 ARFGEF1Q9Y6D6 1849 aa12.79□□□□□ -0.36
LDLRAD3-201ENST00000315571 MROH7-TTC4A0A0A0MT08 1334 aa12.79□□□□□ -0.36
LDLRAD3-201ENST00000315571 ESYT3A0FGR9 886 aa12.79□□□□□ -0.36
LDLRAD3-201ENST00000315571 GCLCP48506 637 aaPredicted RBP12.79□□□□□ -0.36
LDLRAD3-201ENST00000315571 MPP3Q13368 585 aa12.79□□□□□ -0.36
LDLRAD3-201ENST00000315571 FAM228AQ86W67 206 aa12.79□□□□□ -0.36
LDLRAD3-201ENST00000315571 LCORLQ8N3X6 602 aa12.79□□□□□ -0.36
LDLRAD3-201ENST00000315571 DTNBP1Q96EV8 351 aa12.79□□□□□ -0.36
LDLRAD3-201ENST00000315571 FER1L6Q2WGJ9 1857 aa12.79□□□□□ -0.36
LDLRAD3-201ENST00000315571 DPPA5A6NC42 116 aa12.78□□□□□ -0.36
LDLRAD3-201ENST00000315571 VIL1P09327 827 aaKnown RBP12.78□□□□□ -0.36
LDLRAD3-201ENST00000315571 GNAT2P19087 354 aa12.78□□□□□ -0.36
LDLRAD3-201ENST00000315571 PRELPP51888 382 aa12.78□□□□□ -0.36
LDLRAD3-201ENST00000315571 DYNLL1P63167 89 aaKnown RBP12.78□□□□□ -0.36
LDLRAD3-201ENST00000315571 TRIM29Q14134 588 aa12.78□□□□□ -0.36
LDLRAD3-201ENST00000315571 TLDC1Q6P9B6 456 aa12.78□□□□□ -0.36
LDLRAD3-201ENST00000315571 ENGASEQ8NFI3 743 aa12.78□□□□□ -0.36
LDLRAD3-201ENST00000315571 NAF1Q96HR8 494 aaKnown RBP12.78□□□□□ -0.36
LDLRAD3-201ENST00000315571 IFT74Q96LB3 600 aa12.78□□□□□ -0.36
LDLRAD3-201ENST00000315571 STIM2Q9P246 746 aa12.78□□□□□ -0.36
LDLRAD3-201ENST00000315571 NFU1Q9UMS0 254 aa12.78□□□□□ -0.36
LDLRAD3-201ENST00000315571 ZNF711Q9Y462 761 aa12.78□□□□□ -0.36
LDLRAD3-201ENST00000315571 SLC4A4Q9Y6R1 1079 aa12.78□□□□□ -0.36
LDLRAD3-201ENST00000315571 MAFGO15525 162 aa12.78□□□□□ -0.36
LDLRAD3-201ENST00000315571 TEX33O43247 280 aa12.78□□□□□ -0.36
LDLRAD3-201ENST00000315571 BTDP43251 543 aa12.78□□□□□ -0.36
LDLRAD3-201ENST00000315571 GUCY2DQ02846 1103 aa12.78□□□□□ -0.36
LDLRAD3-201ENST00000315571 KIF5AQ12840 1032 aa12.78□□□□□ -0.36
LDLRAD3-201ENST00000315571 KBTBD12Q3ZCT8 623 aa12.78□□□□□ -0.36
LDLRAD3-201ENST00000315571 TTMPQ5BVD1 217 aa12.78□□□□□ -0.36
LDLRAD3-201ENST00000315571 ATL3Q6DD88 541 aa12.78□□□□□ -0.36
LDLRAD3-201ENST00000315571 IFT20Q8IY31 132 aa12.78□□□□□ -0.36
LDLRAD3-201ENST00000315571 KIF2BQ8N4N8 673 aa12.78□□□□□ -0.36
LDLRAD3-201ENST00000315571 STRBPQ96SI9 672 aaKnown RBP12.78□□□□□ -0.36
LDLRAD3-201ENST00000315571 LRRC1Q9BTT6 524 aa12.78□□□□□ -0.36
LDLRAD3-201ENST00000315571 COL4A5P29400 1685 aa12.78□□□□□ -0.36
LDLRAD3-201ENST00000315571 CTNND1O60716 968 aaKnown RBP12.78□□□□□ -0.36
LDLRAD3-201ENST00000315571 HSPD1P10809 573 aaKnown RBP12.78□□□□□ -0.36
LDLRAD3-201ENST00000315571 PPARAQ07869 468 aa12.78□□□□□ -0.36
LDLRAD3-201ENST00000315571 PRPF4BQ13523 1007 aaKnown RBP12.78□□□□□ -0.36
LDLRAD3-201ENST00000315571 BRAPQ7Z569 592 aa12.78□□□□□ -0.36
LDLRAD3-201ENST00000315571 GPIHBP1Q8IV16 184 aa12.78□□□□□ -0.36
LDLRAD3-201ENST00000315571 CRNKL1Q9BZJ0 848 aaKnown RBP12.78□□□□□ -0.36
LDLRAD3-201ENST00000315571 NACAP1Q9BZK3 213 aa12.78□□□□□ -0.36
LDLRAD3-201ENST00000315571 U3KPZ7 1027 aaPredicted RBP12.78□□□□□ -0.36
LDLRAD3-201ENST00000315571 DCAF8L1A6NGE4 600 aa12.77□□□□□ -0.36
LDLRAD3-201ENST00000315571 ALDH3A1P30838 453 aa12.77□□□□□ -0.36
LDLRAD3-201ENST00000315571 PSMC4P43686 418 aa12.77□□□□□ -0.36
LDLRAD3-201ENST00000315571 TBC1D5Q92609 795 aa12.77□□□□□ -0.36
LDLRAD3-201ENST00000315571 SH3GL2Q99962 352 aa12.77□□□□□ -0.36
LDLRAD3-201ENST00000315571 TCHPQ9BT92 498 aa12.77□□□□□ -0.36
LDLRAD3-201ENST00000315571 DSCC1Q9BVC3 393 aa12.77□□□□□ -0.36
LDLRAD3-201ENST00000315571 EPN1Q9Y6I3 576 aaPredicted RBP12.77□□□□□ -0.36
LDLRAD3-201ENST00000315571 SUPT3HO75486 399 aa12.77□□□□□ -0.37
LDLRAD3-201ENST00000315571 C9orf131Q5VYM1 1079 aa12.77□□□□□ -0.37
LDLRAD3-201ENST00000315571 AGBL3Q8NEM8 1001 aa12.77□□□□□ -0.37
LDLRAD3-201ENST00000315571 PRCCQ92733 491 aaPredicted RBP12.77□□□□□ -0.37
LDLRAD3-201ENST00000315571 OSBPL7Q9BZF2 842 aa12.77□□□□□ -0.37
LDLRAD3-201ENST00000315571 TFR2Q9UP52 801 aa12.77□□□□□ -0.37
LDLRAD3-201ENST00000315571 DAGLAQ9Y4D2 1042 aa12.77□□□□□ -0.37
LDLRAD3-201ENST00000315571 FZD9O00144 591 aa12.77□□□□□ -0.37
LDLRAD3-201ENST00000315571 ABL1P00519 1130 aa12.77□□□□□ -0.37
LDLRAD3-201ENST00000315571 PLCG2P16885 1265 aa12.77□□□□□ -0.37
LDLRAD3-201ENST00000315571 MAGEA10P43363 369 aaPredicted RBP12.77□□□□□ -0.37
LDLRAD3-201ENST00000315571 AFMP43652 599 aa12.77□□□□□ -0.37
LDLRAD3-201ENST00000315571 CRKP46108 304 aa12.77□□□□□ -0.37
LDLRAD3-201ENST00000315571 ANKRD20A2Q5SQ80 823 aa12.77□□□□□ -0.37
LDLRAD3-201ENST00000315571 ANKRD20A1Q5TYW2 823 aa12.77□□□□□ -0.37
LDLRAD3-201ENST00000315571 ANKRD20A3Q5VUR7 823 aa12.77□□□□□ -0.37
LDLRAD3-201ENST00000315571 PIDD1Q9HB75 910 aa12.77□□□□□ -0.37
LDLRAD3-201ENST00000315571 EPB41L5Q9HCM4 733 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms