RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 TMEM206Q9H813 350 aa14.98□□□□□ -0.01
SPAST-201ENST00000315285 CYP19A1P11511 503 aaPredicted RBP14.98□□□□□ -0.01
SPAST-201ENST00000315285 STAT2P52630 851 aa14.98□□□□□ -0.01
SPAST-201ENST00000315285 DHX9Q08211 1270 aaKnown RBP14.98□□□□□ -0.01
SPAST-201ENST00000315285 SCYL2Q6P3W7 929 aa14.98□□□□□ -0.01
SPAST-201ENST00000315285 GABPB2Q8TAK5 448 aaPredicted RBP14.98□□□□□ -0.01
SPAST-201ENST00000315285 PPRC1Q5VV67 1664 aaKnown RBP14.98□□□□□ -0.01
SPAST-201ENST00000315285 CPDO75976 1380 aa14.98□□□□□ -0.01
SPAST-201ENST00000315285 PXDNLA1KZ92 1463 aa14.98□□□□□ -0.01
SPAST-201ENST00000315285 FOXN1O15353 648 aa14.98□□□□□ -0.01
SPAST-201ENST00000315285 NNTQ13423 1086 aa14.98□□□□□ -0.01
SPAST-201ENST00000315285 TERF2Q15554 542 aa14.98□□□□□ -0.01
SPAST-201ENST00000315285 TBC1D10BQ4KMP7 808 aaPredicted RBP14.98□□□□□ -0.01
SPAST-201ENST00000315285 ALKBH5Q6P6C2 394 aaKnown RBP14.98□□□□□ -0.01
SPAST-201ENST00000315285 RILPQ96NA2 401 aa14.98□□□□□ -0.01
SPAST-201ENST00000315285 PAGR1Q9BTK6 254 aa14.98□□□□□ -0.01
SPAST-201ENST00000315285 CPVLQ9H3G5 476 aa14.98□□□□□ -0.01
SPAST-201ENST00000315285 TEX33O43247 280 aa14.98□□□□□ -0.01
SPAST-201ENST00000315285 DDIT3P35638 169 aa14.98□□□□□ -0.01
SPAST-201ENST00000315285 IFT88Q13099 833 aa14.98□□□□□ -0.01
SPAST-201ENST00000315285 CC2D1AQ6P1N0 951 aaPredicted RBP14.98□□□□□ -0.01
SPAST-201ENST00000315285 ODF2LQ9ULJ1 636 aa14.98□□□□□ -0.01
SPAST-201ENST00000315285 LRRIQ1Q96JM4 1722 aa14.98□□□□□ -0.01
SPAST-201ENST00000315285 POTEMA6NI47 508 aa14.97□□□□□ -0.01
SPAST-201ENST00000315285 ALS2CLQ60I27 953 aa14.97□□□□□ -0.01
SPAST-201ENST00000315285 WHAMMQ8TF30 809 aa14.97□□□□□ -0.01
SPAST-201ENST00000315285 IL25Q9H293 177 aa14.97□□□□□ -0.01
SPAST-201ENST00000315285 BHMT2Q9H2M3 363 aa14.97□□□□□ -0.01
SPAST-201ENST00000315285 ADGRG1Q9Y653 693 aa14.97□□□□□ -0.01
SPAST-201ENST00000315285 MAPK4P31152 587 aa14.97□□□□□ -0.01
SPAST-201ENST00000315285 RNF10Q8N5U6 811 aaKnown RBP14.97□□□□□ -0.01
SPAST-201ENST00000315285 DLC1Q96QB1 1528 aa14.97□□□□□ -0.01
SPAST-201ENST00000315285 RNF8O76064 485 aa14.97□□□□□ -0.01
SPAST-201ENST00000315285 HSPA6P17066 643 aa14.97□□□□□ -0.01
SPAST-201ENST00000315285 TAF12Q16514 161 aa14.97□□□□□ -0.01
SPAST-201ENST00000315285 EMBQ6PCB8 327 aa14.97□□□□□ -0.01
SPAST-201ENST00000315285 TRIM11Q96F44 468 aa14.97□□□□□ -0.01
SPAST-201ENST00000315285 CHGBP05060 677 aa14.97□□□□□ -0.01
SPAST-201ENST00000315285 IQCB1Q15051 598 aa14.97□□□□□ -0.01
SPAST-201ENST00000315285 TBC1D31Q96DN5 1066 aa14.97□□□□□ -0.01
SPAST-201ENST00000315285 TACO1Q9BSH4 297 aaKnown RBP14.97□□□□□ -0.01
SPAST-201ENST00000315285 UBE2TQ9NPD8 197 aaPredicted RBP14.97□□□□□ -0.01
SPAST-201ENST00000315285 SEPT9Q9UHD8 586 aaPredicted RBP14.97□□□□□ -0.01
SPAST-201ENST00000315285 RIPOR2Q9Y4F9 1068 aa14.97□□□□□ -0.01
SPAST-201ENST00000315285 CSADQ9Y600 493 aa14.97□□□□□ -0.01
SPAST-201ENST00000315285 USP17L5A8MUK1 530 aa14.96□□□□□ -0.01
SPAST-201ENST00000315285 CELF1Q92879 486 aaKnown RBP14.96□□□□□ -0.01
SPAST-201ENST00000315285 KCNF1Q9H3M0 494 aa14.96□□□□□ -0.01
SPAST-201ENST00000315285 NRBP2Q9NSY0 501 aa14.96□□□□□ -0.01
SPAST-201ENST00000315285 MXI1P50539 228 aa14.96□□□□□ -0.01
SPAST-201ENST00000315285 LMNB2Q03252 620 aa14.96□□□□□ -0.01
SPAST-201ENST00000315285 METTL16Q86W50 562 aaKnown RBP14.96□□□□□ -0.01
SPAST-201ENST00000315285 CCDC125Q86Z20 511 aa14.96□□□□□ -0.01
SPAST-201ENST00000315285 SLC44A5Q8NCS7 719 aa14.96□□□□□ -0.01
SPAST-201ENST00000315285 CCDC197Q8NCU1 140 aa14.96□□□□□ -0.01
SPAST-201ENST00000315285 ZNF408Q9H9D4 720 aa14.96□□□□□ -0.01
SPAST-201ENST00000315285 KMT5AQ9NQR1 393 aa14.96□□□□□ -0.01
SPAST-201ENST00000315285 PCDHB4Q9Y5E5 795 aa14.96□□□□□ -0.01
SPAST-201ENST00000315285 SARNPP82979 210 aaKnown RBP14.96□□□□□ -0.01
SPAST-201ENST00000315285 CCDC38Q502W7 563 aa14.96□□□□□ -0.01
SPAST-201ENST00000315285 SGO2Q562F6 1265 aa14.96□□□□□ -0.01
SPAST-201ENST00000315285 TAB3Q8N5C8 712 aaPredicted RBP14.96□□□□□ -0.01
SPAST-201ENST00000315285 RAB3IPQ96QF0 476 aaPredicted RBP14.96□□□□□ -0.01
SPAST-201ENST00000315285 MMS19Q96T76 1030 aa14.96□□□□□ -0.01
SPAST-201ENST00000315285 OVOS2A0A0J9YW53 1432 aa14.96□□□□□ -0.01
SPAST-201ENST00000315285 OVOS2Q6IE36 1432 aa14.96□□□□□ -0.01
SPAST-201ENST00000315285 PNPLA7Q6ZV29 1317 aa14.96□□□□□ -0.02
SPAST-201ENST00000315285 ANO9A1A5B4 782 aa14.96□□□□□ -0.02
SPAST-201ENST00000315285 PPP2R5AQ15172 486 aa14.96□□□□□ -0.02
SPAST-201ENST00000315285 MIS12Q9H081 205 aa14.96□□□□□ -0.02
SPAST-201ENST00000315285 SRGAP2O75044 1071 aa14.95□□□□□ -0.02
SPAST-201ENST00000315285 RPS6KA4O75676 772 aa14.95□□□□□ -0.02
SPAST-201ENST00000315285 ECEL1O95672 775 aa14.95□□□□□ -0.02
SPAST-201ENST00000315285 TMOD1P28289 359 aa14.95□□□□□ -0.02
SPAST-201ENST00000315285 HOXA13P31271 388 aaPredicted RBP14.95□□□□□ -0.02
SPAST-201ENST00000315285 MAP2K2P36507 400 aa14.95□□□□□ -0.02
SPAST-201ENST00000315285 VCX3BQ9H321 246 aa14.95□□□□□ -0.02
SPAST-201ENST00000315285 NOD1Q9Y239 953 aa14.95□□□□□ -0.02
SPAST-201ENST00000315285 PTPRUQ92729 1446 aa14.95□□□□□ -0.02
SPAST-201ENST00000315285 PVALEFA0A1B0GWK0 134 aa14.95□□□□□ -0.02
SPAST-201ENST00000315285 CRCPO75575 148 aa14.95□□□□□ -0.02
SPAST-201ENST00000315285 SUN1O94901 812 aa14.95□□□□□ -0.02
SPAST-201ENST00000315285 CLTAP09496 248 aa14.95□□□□□ -0.02
SPAST-201ENST00000315285 GUCY1A2P33402 732 aa14.95□□□□□ -0.02
SPAST-201ENST00000315285 LLGL1Q15334 1064 aa14.95□□□□□ -0.02
SPAST-201ENST00000315285 AFAP1L2Q8N4X5 818 aa14.95□□□□□ -0.02
SPAST-201ENST00000315285 COA1Q9GZY4 146 aa14.95□□□□□ -0.02
SPAST-201ENST00000315285 TTLL3Q9Y4R7 772 aa14.95□□□□□ -0.02
SPAST-201ENST00000315285 ABCA9Q8IUA7 1624 aa14.95□□□□□ -0.02
SPAST-201ENST00000315285 HIP1RO75146 1068 aa14.95□□□□□ -0.02
SPAST-201ENST00000315285 GRM4Q14833 912 aa14.95□□□□□ -0.02
SPAST-201ENST00000315285 TXNRD1Q16881 649 aa14.95□□□□□ -0.02
SPAST-201ENST00000315285 EFCAB13Q8IY85 973 aa14.95□□□□□ -0.02
SPAST-201ENST00000315285 CCT6BQ92526 530 aa14.95□□□□□ -0.02
SPAST-201ENST00000315285 HAUS1Q96CS2 278 aa14.95□□□□□ -0.02
SPAST-201ENST00000315285 AP1M1Q9BXS5 423 aa14.95□□□□□ -0.02
SPAST-201ENST00000315285 TPD52P55327 224 aaPredicted RBP14.95□□□□□ -0.02
SPAST-201ENST00000315285 PROM2Q8N271 834 aa14.95□□□□□ -0.02
SPAST-201ENST00000315285 SLC7A3Q8WY07 619 aa14.95□□□□□ -0.02
SPAST-201ENST00000315285 CEP72Q9P209 647 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms