RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 SPATA31C1P0DKV0 1188 aa13.79□□□□□ -0.2
RNF4-201ENST00000314289 H2AFXP16104 143 aaPredicted RBP13.79□□□□□ -0.2
RNF4-201ENST00000314289 CYP11B2P19099 503 aa13.79□□□□□ -0.2
RNF4-201ENST00000314289 CYP3A7P24462 503 aa13.79□□□□□ -0.2
RNF4-201ENST00000314289 GMPSP49915 693 aaPredicted RBP13.79□□□□□ -0.2
RNF4-201ENST00000314289 FAM26FQ5R3K3 315 aa13.79□□□□□ -0.2
RNF4-201ENST00000314289 LDHDQ86WU2 507 aa13.79□□□□□ -0.2
RNF4-201ENST00000314289 L2HGDHQ9H9P8 463 aa13.79□□□□□ -0.2
RNF4-201ENST00000314289 FAM207AQ9NSI2 230 aaPredicted RBP13.79□□□□□ -0.2
RNF4-201ENST00000314289 TRIM10Q9UDY6 481 aa13.79□□□□□ -0.2
RNF4-201ENST00000314289 ITIH6Q6UXX5 1313 aa13.79□□□□□ -0.2
RNF4-201ENST00000314289 RASSF10A6NK89 507 aa13.79□□□□□ -0.2
RNF4-201ENST00000314289 RSPH10B2B2RC85 870 aa13.79□□□□□ -0.2
RNF4-201ENST00000314289 CCP110O43303 1012 aa13.79□□□□□ -0.2
RNF4-201ENST00000314289 TFRCP02786 760 aaKnown RBP13.79□□□□□ -0.2
RNF4-201ENST00000314289 RSPH10BP0C881 870 aa13.79□□□□□ -0.2
RNF4-201ENST00000314289 POLD1P28340 1107 aa13.79□□□□□ -0.2
RNF4-201ENST00000314289 CASP5P51878 434 aa13.79□□□□□ -0.2
RNF4-201ENST00000314289 SLFN12Q8IYM2 578 aa13.79□□□□□ -0.2
RNF4-201ENST00000314289 TANGO6Q9C0B7 1094 aa13.79□□□□□ -0.2
RNF4-201ENST00000314289 NT5C3AQ9H0P0 336 aa13.79□□□□□ -0.2
RNF4-201ENST00000314289 PGAP2Q9UHJ9 254 aa13.79□□□□□ -0.2
RNF4-201ENST00000314289 LUC7L2Q9Y383 392 aaKnown RBP13.79□□□□□ -0.2
RNF4-201ENST00000314289 FHOD1Q9Y613 1164 aa13.79□□□□□ -0.2
RNF4-201ENST00000314289 TULP1O00294 542 aaPredicted RBP13.79□□□□□ -0.2
RNF4-201ENST00000314289 EPHB6O15197 1021 aa13.79□□□□□ -0.2
RNF4-201ENST00000314289 PNMA6AP0CW24 399 aaPredicted RBP13.79□□□□□ -0.2
RNF4-201ENST00000314289 IRX5P78411 483 aaPredicted RBP13.79□□□□□ -0.2
RNF4-201ENST00000314289 MNS1Q8NEH6 495 aa13.79□□□□□ -0.2
RNF4-201ENST00000314289 UBXN4Q92575 508 aa13.79□□□□□ -0.2
RNF4-201ENST00000314289 BHMT2Q9H2M3 363 aa13.79□□□□□ -0.2
RNF4-201ENST00000314289 BMP2KQ9NSY1 1161 aaPredicted RBP13.79□□□□□ -0.2
RNF4-201ENST00000314289 PSME4Q14997 1843 aa13.79□□□□□ -0.2
RNF4-201ENST00000314289 GCOM1H8Y6P7 765 aaPredicted RBP13.78□□□□□ -0.2
RNF4-201ENST00000314289 TRAF5O00463 557 aa13.78□□□□□ -0.2
RNF4-201ENST00000314289 POLR2MP0CAP2 368 aa13.78□□□□□ -0.2
RNF4-201ENST00000314289 GRIPAP1Q4V328 841 aa13.78□□□□□ -0.2
RNF4-201ENST00000314289 NBPF12Q5TAG4 269 aaPredicted RBP13.78□□□□□ -0.2
RNF4-201ENST00000314289 TPH2Q8IWU9 490 aa13.78□□□□□ -0.2
RNF4-201ENST00000314289 MYOCDQ8IZQ8 938 aa13.78□□□□□ -0.2
RNF4-201ENST00000314289 CHURC1Q8WUH1 139 aa13.78□□□□□ -0.2
RNF4-201ENST00000314289 EPC1Q9H2F5 836 aa13.78□□□□□ -0.2
RNF4-201ENST00000314289 IKZF4Q9H2S9 585 aa13.78□□□□□ -0.2
RNF4-201ENST00000314289 ZSWIM4Q9H7M6 989 aa13.78□□□□□ -0.2
RNF4-201ENST00000314289 ABCB11O95342 1321 aa13.78□□□□□ -0.2
RNF4-201ENST00000314289 NFIBO00712 420 aa13.78□□□□□ -0.2
RNF4-201ENST00000314289 SEC31AO94979 1220 aaKnown RBP13.78□□□□□ -0.2
RNF4-201ENST00000314289 FOSP01100 380 aaPredicted RBP13.78□□□□□ -0.2
RNF4-201ENST00000314289 ASNSP08243 561 aa13.78□□□□□ -0.2
RNF4-201ENST00000314289 DNM2P50570 870 aa13.78□□□□□ -0.2
RNF4-201ENST00000314289 APBA1Q02410 837 aa13.78□□□□□ -0.2
RNF4-201ENST00000314289 PRKG1Q13976 671 aa13.78□□□□□ -0.2
RNF4-201ENST00000314289 FAM83AQ86UY5 434 aa13.78□□□□□ -0.2
RNF4-201ENST00000314289 GUF1Q8N442 669 aaKnown RBP13.78□□□□□ -0.2
RNF4-201ENST00000314289 MBOAT7Q96N66 472 aa13.78□□□□□ -0.2
RNF4-201ENST00000314289 PURBQ96QR8 312 aaKnown RBP13.78□□□□□ -0.2
RNF4-201ENST00000314289 KDM3AQ9Y4C1 1321 aa13.78□□□□□ -0.2
RNF4-201ENST00000314289 IGLV3-22A0A075B6J6 115 aa13.77□□□□□ -0.2
RNF4-201ENST00000314289 PHF20L1A8MW92 1017 aa13.77□□□□□ -0.2
RNF4-201ENST00000314289 CASQ1P31415 396 aa13.77□□□□□ -0.2
RNF4-201ENST00000314289 SLC12A3P55017 1021 aa13.77□□□□□ -0.2
RNF4-201ENST00000314289 TGFB2P61812 414 aa13.77□□□□□ -0.2
RNF4-201ENST00000314289 EHHADHQ08426 723 aa13.77□□□□□ -0.2
RNF4-201ENST00000314289 Q4G0T1 1027 aa13.77□□□□□ -0.2
RNF4-201ENST00000314289 DLK2Q6UY11 383 aa13.77□□□□□ -0.2
RNF4-201ENST00000314289 SMCR8Q8TEV9 937 aaPredicted RBP13.77□□□□□ -0.2
RNF4-201ENST00000314289 ZBED3Q96IU2 234 aaPredicted RBP13.77□□□□□ -0.2
RNF4-201ENST00000314289 TEPSINQ96N21 525 aa13.77□□□□□ -0.2
RNF4-201ENST00000314289 CARD6Q9BX69 1037 aa13.77□□□□□ -0.2
RNF4-201ENST00000314289 RAVER2Q9HCJ3 691 aaKnown RBP13.77□□□□□ -0.2
RNF4-201ENST00000314289 CNOT7Q9UIV1 285 aaKnown RBP13.77□□□□□ -0.2
RNF4-201ENST00000314289 HACL1Q9UJ83 578 aa13.77□□□□□ -0.2
RNF4-201ENST00000314289 CCPG1Q9ULG6 757 aa13.77□□□□□ -0.2
RNF4-201ENST00000314289 ARP10275 920 aa13.77□□□□□ -0.21
RNF4-201ENST00000314289 WDR59Q6PJI9 974 aa13.77□□□□□ -0.21
RNF4-201ENST00000314289 TMCO3Q6UWJ1 677 aa13.77□□□□□ -0.21
RNF4-201ENST00000314289 ZKSCAN4Q969J2 545 aaPredicted RBP13.77□□□□□ -0.21
RNF4-201ENST00000314289 NAP1L4Q99733 375 aaKnown RBP13.77□□□□□ -0.21
RNF4-201ENST00000314289 EIF2AK1Q9BQI3 630 aaKnown RBP13.77□□□□□ -0.21
RNF4-201ENST00000314289 REEP2Q9BRK0 252 aa13.77□□□□□ -0.21
RNF4-201ENST00000314289 RANBP17Q9H2T7 1088 aaKnown RBP13.77□□□□□ -0.21
RNF4-201ENST00000314289 MMRN2Q9H8L6 949 aa13.77□□□□□ -0.21
RNF4-201ENST00000314289 VAV3Q9UKW4 847 aa13.77□□□□□ -0.21
RNF4-201ENST00000314289 DNM3Q9UQ16 869 aa13.77□□□□□ -0.21
RNF4-201ENST00000314289 ALAS1P13196 640 aa13.77□□□□□ -0.21
RNF4-201ENST00000314289 MMP14P50281 582 aa13.77□□□□□ -0.21
RNF4-201ENST00000314289 MTMR2Q13614 643 aa13.77□□□□□ -0.21
RNF4-201ENST00000314289 ZNF569Q5MCW4 686 aa13.77□□□□□ -0.21
RNF4-201ENST00000314289 LRCH2Q5VUJ6 765 aa13.77□□□□□ -0.21
RNF4-201ENST00000314289 HAUS3Q68CZ6 603 aa13.77□□□□□ -0.21
RNF4-201ENST00000314289 NLGN2Q8NFZ4 835 aa13.77□□□□□ -0.21
RNF4-201ENST00000314289 OR8K1Q8NGG5 319 aa13.77□□□□□ -0.21
RNF4-201ENST00000314289 HOOK2Q96ED9 719 aa13.77□□□□□ -0.21
RNF4-201ENST00000314289 SH2D3AQ9BRG2 576 aa13.77□□□□□ -0.21
RNF4-201ENST00000314289 CRACR2AQ9BSW2 395 aa13.77□□□□□ -0.21
RNF4-201ENST00000314289 DEFB129Q9H1M3 183 aa13.77□□□□□ -0.21
RNF4-201ENST00000314289 CALCOCO1Q9P1Z2 691 aa13.77□□□□□ -0.21
RNF4-201ENST00000314289 COL20A1Q9P218 1284 aa13.77□□□□□ -0.21
RNF4-201ENST00000314289 PLEKP08567 350 aaPredicted RBP13.76□□□□□ -0.21
RNF4-201ENST00000314289 PLA2G4AP47712 749 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms