RNA–Protein interactions for RNA: ENST00000310260.7

VANGL1-201, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-201ENST00000310260 C17orf99Q6UX52 265 aa14.17□□□□□ -0.14
VANGL1-201ENST00000310260 SRGAP1Q7Z6B7 1085 aa14.17□□□□□ -0.14
VANGL1-201ENST00000310260 RNF26Q9BY78 433 aaPredicted RBP14.17□□□□□ -0.14
VANGL1-201ENST00000310260 TUBE1Q9UJT0 475 aa14.17□□□□□ -0.14
VANGL1-201ENST00000310260 NID2Q14112 1375 aa14.17□□□□□ -0.14
VANGL1-201ENST00000310260 STX10O60499 249 aa14.17□□□□□ -0.14
VANGL1-201ENST00000310260 CUTAO60888 179 aa14.17□□□□□ -0.14
VANGL1-201ENST00000310260 EIF3JO75822 258 aaKnown RBP14.17□□□□□ -0.14
VANGL1-201ENST00000310260 SF3A1Q15459 793 aaKnown RBP14.17□□□□□ -0.14
VANGL1-201ENST00000310260 LRRC31Q6UY01 552 aa14.17□□□□□ -0.14
VANGL1-201ENST00000310260 NSMFQ6X4W1 530 aa14.17□□□□□ -0.14
VANGL1-201ENST00000310260 CCDC12Q8WUD4 166 aaPredicted RBP14.17□□□□□ -0.14
VANGL1-201ENST00000310260 MTMR8Q96EF0 704 aa14.17□□□□□ -0.14
VANGL1-201ENST00000310260 DRC1Q96MC2 740 aa14.17□□□□□ -0.14
VANGL1-201ENST00000310260 ALG1Q9BT22 464 aa14.17□□□□□ -0.14
VANGL1-201ENST00000310260 RNF146Q9NTX7 359 aa14.17□□□□□ -0.14
VANGL1-201ENST00000310260 WBP1LQ9NX94 342 aa14.17□□□□□ -0.14
VANGL1-201ENST00000310260 L1RE1Q9UN81 338 aa14.17□□□□□ -0.14
VANGL1-201ENST00000310260 SPTLC2O15270 562 aa14.16□□□□□ -0.14
VANGL1-201ENST00000310260 DEXIO95424 95 aa14.16□□□□□ -0.14
VANGL1-201ENST00000310260 FDX1P10109 184 aa14.16□□□□□ -0.14
VANGL1-201ENST00000310260 CCNA1P78396 465 aa14.16□□□□□ -0.14
VANGL1-201ENST00000310260 PFKFB3Q16875 520 aaPredicted RBP14.16□□□□□ -0.14
VANGL1-201ENST00000310260 AXDND1Q5T1B0 1012 aaPredicted RBP14.16□□□□□ -0.14
VANGL1-201ENST00000310260 TC2NQ8N9U0 490 aa14.16□□□□□ -0.14
VANGL1-201ENST00000310260 GTF3C2Q8WUA4 911 aaPredicted RBP14.16□□□□□ -0.14
VANGL1-201ENST00000310260 TBC1D5Q92609 795 aa14.16□□□□□ -0.14
VANGL1-201ENST00000310260 ZSWIM4Q9H7M6 989 aa14.16□□□□□ -0.14
VANGL1-201ENST00000310260 MRPL44Q9H9J2 332 aaKnown RBP14.16□□□□□ -0.14
VANGL1-201ENST00000310260 SUGCTQ9HAC7 445 aa14.16□□□□□ -0.14
VANGL1-201ENST00000310260 KCNJ14Q9UNX9 436 aa14.16□□□□□ -0.14
VANGL1-201ENST00000310260 SMCHD1A6NHR9 2005 aa14.16□□□□□ -0.14
VANGL1-201ENST00000310260 NFIBO00712 420 aa14.16□□□□□ -0.14
VANGL1-201ENST00000310260 BCRP11274 1271 aa14.16□□□□□ -0.14
VANGL1-201ENST00000310260 FAM110CQ1W6H9 321 aa14.16□□□□□ -0.14
VANGL1-201ENST00000310260 DESI2Q9BSY9 194 aa14.16□□□□□ -0.14
VANGL1-201ENST00000310260 ARHGAP39Q9C0H5 1083 aa14.16□□□□□ -0.14
VANGL1-201ENST00000310260 POTEB2H3BUK9 544 aa14.15□□□□□ -0.14
VANGL1-201ENST00000310260 CFBP00751 764 aa14.15□□□□□ -0.14
VANGL1-201ENST00000310260 HOXA13P31271 388 aaPredicted RBP14.15□□□□□ -0.14
VANGL1-201ENST00000310260 SP3Q02447 781 aa14.15□□□□□ -0.14
VANGL1-201ENST00000310260 KARSQ15046 597 aaKnown RBP14.15□□□□□ -0.14
VANGL1-201ENST00000310260 TYW1BQ6NUM6 668 aa14.15□□□□□ -0.14
VANGL1-201ENST00000310260 SUGP1Q8IWZ8 645 aaKnown RBP14.15□□□□□ -0.14
VANGL1-201ENST00000310260 FAM71BQ8TC56 605 aa14.15□□□□□ -0.14
VANGL1-201ENST00000310260 RLFQ13129 1914 aa14.15□□□□□ -0.14
VANGL1-201ENST00000310260 ADGRA2Q96PE1 1338 aa14.15□□□□□ -0.14
VANGL1-201ENST00000310260 GPR25O00155 361 aa14.15□□□□□ -0.14
VANGL1-201ENST00000310260 STXBP3O00186 592 aa14.15□□□□□ -0.14
VANGL1-201ENST00000310260 CMA1P23946 247 aa14.15□□□□□ -0.14
VANGL1-201ENST00000310260 NLRP5P59047 1200 aa14.15□□□□□ -0.14
VANGL1-201ENST00000310260 RIOX2Q8IUF8 465 aa14.15□□□□□ -0.14
VANGL1-201ENST00000310260 ANKRD35Q8N283 1001 aa14.15□□□□□ -0.14
VANGL1-201ENST00000310260 CNNM3Q8NE01 707 aa14.15□□□□□ -0.14
VANGL1-201ENST00000310260 SECISBP2LQ93073 1101 aaKnown RBP14.15□□□□□ -0.14
VANGL1-201ENST00000310260 ABCB6Q9NP58 842 aa14.15□□□□□ -0.14
VANGL1-201ENST00000310260 FANCLQ9NW38 375 aa14.15□□□□□ -0.14
VANGL1-201ENST00000310260 MORF4L1Q9UBU8 362 aa14.15□□□□□ -0.14
VANGL1-201ENST00000310260 MRPL11Q9Y3B7 192 aaKnown RBP14.15□□□□□ -0.14
VANGL1-201ENST00000310260 SMCO2A6NFE2 343 aa14.14□□□□□ -0.15
VANGL1-201ENST00000310260 CALML3P27482 149 aa14.14□□□□□ -0.15
VANGL1-201ENST00000310260 PSMC4P43686 418 aa14.14□□□□□ -0.15
VANGL1-201ENST00000310260 PSEN1P49768 467 aa14.14□□□□□ -0.15
VANGL1-201ENST00000310260 OAZ1P54368 228 aa14.14□□□□□ -0.15
VANGL1-201ENST00000310260 TRIM29Q14134 588 aa14.14□□□□□ -0.15
VANGL1-201ENST00000310260 MYSM1Q5VVJ2 828 aa14.14□□□□□ -0.15
VANGL1-201ENST00000310260 EFCAB13Q8IY85 973 aa14.14□□□□□ -0.15
VANGL1-201ENST00000310260 IRX2Q9BZI1 471 aaPredicted RBP14.14□□□□□ -0.15
VANGL1-201ENST00000310260 PSTPIP2Q9H939 334 aa14.14□□□□□ -0.15
VANGL1-201ENST00000310260 BARHL2Q9NY43 387 aa14.14□□□□□ -0.15
VANGL1-201ENST00000310260 IVNS1ABPQ9Y6Y0 642 aa14.14□□□□□ -0.15
VANGL1-201ENST00000310260 ANKRD65E5RJM6 399 aa14.13□□□□□ -0.15
VANGL1-201ENST00000310260 ERLIN1O75477 346 aa14.13□□□□□ -0.15
VANGL1-201ENST00000310260 PGK2P07205 417 aa14.13□□□□□ -0.15
VANGL1-201ENST00000310260 CASP8Q14790 479 aa14.13□□□□□ -0.15
VANGL1-201ENST00000310260 USP17L6PQ6QN14 398 aa14.13□□□□□ -0.15
VANGL1-201ENST00000310260 CD99L2Q8TCZ2 262 aa14.13□□□□□ -0.15
VANGL1-201ENST00000310260 ZNF296Q8WUU4 475 aaPredicted RBP14.13□□□□□ -0.15
VANGL1-201ENST00000310260 WASF1Q92558 559 aa14.13□□□□□ -0.15
VANGL1-201ENST00000310260 C8orf76Q96K31 380 aa14.13□□□□□ -0.15
VANGL1-201ENST00000310260 PURBQ96QR8 312 aaKnown RBP14.13□□□□□ -0.15
VANGL1-201ENST00000310260 PUF60Q9UHX1 559 aaKnown RBP14.13□□□□□ -0.15
VANGL1-201ENST00000310260 COL11A1P12107 1806 aaPredicted RBP14.13□□□□□ -0.15
VANGL1-201ENST00000310260 TNPO2O14787 897 aaKnown RBP14.13□□□□□ -0.15
VANGL1-201ENST00000310260 ATP2A1O14983 1001 aa14.13□□□□□ -0.15
VANGL1-201ENST00000310260 SLC25A27O95847 323 aa14.13□□□□□ -0.15
VANGL1-201ENST00000310260 KIF22Q14807 665 aa14.13□□□□□ -0.15
VANGL1-201ENST00000310260 UBE2SQ16763 222 aa14.13□□□□□ -0.15
VANGL1-201ENST00000310260 CLEC4DQ8WXI8 215 aa14.13□□□□□ -0.15
VANGL1-201ENST00000310260 SHISA4Q96DD7 197 aa14.13□□□□□ -0.15
VANGL1-201ENST00000310260 MMP19Q99542 508 aa14.13□□□□□ -0.15
VANGL1-201ENST00000310260 ACAD9Q9H845 621 aa14.13□□□□□ -0.15
VANGL1-201ENST00000310260 CDC23Q9UJX2 597 aa14.13□□□□□ -0.15
VANGL1-201ENST00000310260 ABCB11O95342 1321 aa14.12□□□□□ -0.15
VANGL1-201ENST00000310260 ADAMTS3O15072 1205 aa14.12□□□□□ -0.15
VANGL1-201ENST00000310260 FCER1AP12319 257 aa14.12□□□□□ -0.15
VANGL1-201ENST00000310260 XBP1P17861 261 aa14.12□□□□□ -0.15
VANGL1-201ENST00000310260 ADKP55263 362 aaKnown RBP14.12□□□□□ -0.15
VANGL1-201ENST00000310260 VSNL1P62760 191 aa14.12□□□□□ -0.15
VANGL1-201ENST00000310260 LACTBP83111 547 aaPredicted RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms