RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 SYTL5Q8TDW5 730 aaPredicted RBP23.69■■□□□ 1.38
ATG4D-201ENST00000309469 ZNF577Q9BSK1 485 aa23.69■■□□□ 1.38
ATG4D-201ENST00000309469 GAS7O60861 476 aa23.68■■□□□ 1.38
ATG4D-201ENST00000309469 YBX3P16989 372 aaKnown RBP eCLIP23.68■■□□□ 1.389e-6■□□□□ 10.4
ATG4D-201ENST00000309469 ARSHQ5FYA8 562 aa23.68■■□□□ 1.38
ATG4D-201ENST00000309469 KRT26Q7Z3Y9 468 aa23.68■■□□□ 1.38
ATG4D-201ENST00000309469 SYT2Q8N9I0 419 aaPredicted RBP23.68■■□□□ 1.38
ATG4D-201ENST00000309469 TC2NQ8N9U0 490 aa23.68■■□□□ 1.38
ATG4D-201ENST00000309469 TRERF1Q96PN7 1200 aa23.68■■□□□ 1.38
ATG4D-201ENST00000309469 HSD17B14Q9BPX1 270 aa23.68■■□□□ 1.38
ATG4D-201ENST00000309469 AFG3L2Q9Y4W6 797 aa23.68■■□□□ 1.38
ATG4D-201ENST00000309469 CYP4A11Q02928 519 aa23.67■■□□□ 1.38
ATG4D-201ENST00000309469 SLC30A10Q6XR72 485 aa23.67■■□□□ 1.38
ATG4D-201ENST00000309469 CCAR2Q8N163 923 aaKnown RBP23.67■■□□□ 1.38
ATG4D-201ENST00000309469 DCPSQ96C86 337 aaKnown RBP23.67■■□□□ 1.38
ATG4D-201ENST00000309469 WNK4Q96J92 1243 aa23.67■■□□□ 1.38
ATG4D-201ENST00000309469 RGL1Q9NZL6 768 aa23.67■■□□□ 1.38
ATG4D-201ENST00000309469 ITIH6Q6UXX5 1313 aa23.67■■□□□ 1.38
ATG4D-201ENST00000309469 NPHP3-ACAD11A0A0J9YXS1 232 aa23.67■■□□□ 1.38
ATG4D-201ENST00000309469 USP27XA6NNY8 438 aa23.67■■□□□ 1.38
ATG4D-201ENST00000309469 TPM2P07951 284 aa23.67■■□□□ 1.38
ATG4D-201ENST00000309469 ITGB5P18084 799 aa23.67■■□□□ 1.38
ATG4D-201ENST00000309469 DSG3P32926 999 aa23.67■■□□□ 1.38
ATG4D-201ENST00000309469 ADKP55263 362 aaKnown RBP23.67■■□□□ 1.38
ATG4D-201ENST00000309469 PABPC4Q13310 644 aaKnown RBP eCLIP23.67■■□□□ 1.386e-10■■■□□ 17.6
ATG4D-201ENST00000309469 PPFIBP1Q86W92 1011 aa23.67■■□□□ 1.38
ATG4D-201ENST00000309469 WDR11Q9BZH6 1224 aa23.67■■□□□ 1.38
ATG4D-201ENST00000309469 TUFT1Q9NNX1 390 aa23.67■■□□□ 1.38
ATG4D-201ENST00000309469 TMOD4Q9NZQ9 345 aa23.67■■□□□ 1.38
ATG4D-201ENST00000309469 KRT18P05783 430 aaKnown RBP23.66■■□□□ 1.38
ATG4D-201ENST00000309469 RPS6P62753 249 aaKnown RBP23.66■■□□□ 1.38
ATG4D-201ENST00000309469 COG2Q14746 738 aa23.66■■□□□ 1.38
ATG4D-201ENST00000309469 FAM26FQ5R3K3 315 aa23.66■■□□□ 1.38
ATG4D-201ENST00000309469 C9orf131Q5VYM1 1079 aa23.66■■□□□ 1.38
ATG4D-201ENST00000309469 E4F1Q66K89 784 aaPredicted RBP23.66■■□□□ 1.38
ATG4D-201ENST00000309469 NIPA1Q7RTP0 329 aa23.66■■□□□ 1.38
ATG4D-201ENST00000309469 FAM114A1Q8IWE2 563 aa23.66■■□□□ 1.38
ATG4D-201ENST00000309469 REPS2Q8NFH8 660 aa23.66■■□□□ 1.38
ATG4D-201ENST00000309469 ADAMTS5Q9UNA0 930 aa23.66■■□□□ 1.38
ATG4D-201ENST00000309469 AKR1B15C9JRZ8 316 aaPredicted RBP23.65■■□□□ 1.38
ATG4D-201ENST00000309469 CHMP2AO43633 222 aa23.65■■□□□ 1.38
ATG4D-201ENST00000309469 BCRP11274 1271 aa23.65■■□□□ 1.38
ATG4D-201ENST00000309469 MAP3K9P80192 1104 aa23.65■■□□□ 1.38
ATG4D-201ENST00000309469 LRRC41Q15345 812 aa23.65■■□□□ 1.38
ATG4D-201ENST00000309469 PCNX4Q63HM2 1172 aa23.65■■□□□ 1.38
ATG4D-201ENST00000309469 DLK2Q6UY11 383 aa23.65■■□□□ 1.38
ATG4D-201ENST00000309469 CATSPERGQ6ZRH7 1159 aa23.65■■□□□ 1.38
ATG4D-201ENST00000309469 TMEM139Q8IV31 216 aa23.65■■□□□ 1.38
ATG4D-201ENST00000309469 SULF1Q8IWU6 871 aa23.65■■□□□ 1.38
ATG4D-201ENST00000309469 GLIS3Q8NEA6 775 aa23.65■■□□□ 1.38
ATG4D-201ENST00000309469 IL31RAQ8NI17 732 aa23.65■■□□□ 1.38
ATG4D-201ENST00000309469 TAAR1Q96RJ0 339 aa23.65■■□□□ 1.38
ATG4D-201ENST00000309469 FRMD3A2A2Y4 597 aa23.65■■□□□ 1.38
ATG4D-201ENST00000309469 IPO5O00410 1097 aaKnown RBP23.65■■□□□ 1.38
ATG4D-201ENST00000309469 SLITRK3O94933 977 aa23.65■■□□□ 1.38
ATG4D-201ENST00000309469 OAZ1P54368 228 aa23.65■■□□□ 1.38
ATG4D-201ENST00000309469 RBL2Q08999 1139 aa23.65■■□□□ 1.38
ATG4D-201ENST00000309469 FRMPD4Q14CM0 1322 aa23.65■■□□□ 1.38
ATG4D-201ENST00000309469 RNF207Q6ZRF8 634 aa23.65■■□□□ 1.38
ATG4D-201ENST00000309469 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.65■■□□□ 1.38
ATG4D-201ENST00000309469 MYOCDQ8IZQ8 938 aa23.65■■□□□ 1.38
ATG4D-201ENST00000309469 DYDC2Q96IM9 177 aa23.65■■□□□ 1.38
ATG4D-201ENST00000309469 RIT2Q99578 217 aa23.65■■□□□ 1.38
ATG4D-201ENST00000309469 TEKT3Q9BXF9 490 aa23.65■■□□□ 1.38
ATG4D-201ENST00000309469 TRMT1Q9NXH9 659 aaKnown RBP23.65■■□□□ 1.38
ATG4D-201ENST00000309469 RIPK3Q9Y572 518 aa23.65■■□□□ 1.38
ATG4D-201ENST00000309469 PCDHA2Q9Y5H9 948 aa23.65■■□□□ 1.38
ATG4D-201ENST00000309469 LGALS16A8MUM7 142 aa23.64■■□□□ 1.37
ATG4D-201ENST00000309469 EYA4O95677 639 aa23.64■■□□□ 1.37
ATG4D-201ENST00000309469 CACNB1Q02641 598 aaPredicted RBP23.64■■□□□ 1.37
ATG4D-201ENST00000309469 UBXN1Q04323 297 aa23.64■■□□□ 1.37
ATG4D-201ENST00000309469 LRRC63Q05C16 580 aa23.64■■□□□ 1.37
ATG4D-201ENST00000309469 GIT2Q14161 759 aa23.64■■□□□ 1.37
ATG4D-201ENST00000309469 CTTNQ14247 550 aaKnown RBP23.64■■□□□ 1.37
ATG4D-201ENST00000309469 HERC4Q5GLZ8 1057 aaPredicted RBP23.64■■□□□ 1.37
ATG4D-201ENST00000309469 B3GNT9Q6UX72 402 aa23.64■■□□□ 1.37
ATG4D-201ENST00000309469 C16orf45Q96MC5 204 aaPredicted RBP23.64■■□□□ 1.37
ATG4D-201ENST00000309469 BAG1Q99933 345 aaPredicted RBP23.64■■□□□ 1.37
ATG4D-201ENST00000309469 UNC45AQ9H3U1 944 aa23.64■■□□□ 1.37
ATG4D-201ENST00000309469 RNF146Q9NTX7 359 aa23.64■■□□□ 1.37
ATG4D-201ENST00000309469 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.64■■□□□ 1.37
ATG4D-201ENST00000309469 UBIAD1Q9Y5Z9 338 aa23.64■■□□□ 1.37
ATG4D-201ENST00000309469 ADM5C9JUS6 153 aa23.63■■□□□ 1.37
ATG4D-201ENST00000309469 RAD51AP2Q09MP3 1159 aa23.63■■□□□ 1.37
ATG4D-201ENST00000309469 SH3D19Q5HYK7 790 aa23.63■■□□□ 1.37
ATG4D-201ENST00000309469 FOXR2Q6PJQ5 311 aa23.63■■□□□ 1.37
ATG4D-201ENST00000309469 EEF2KMTQ96G04 330 aa23.63■■□□□ 1.37
ATG4D-201ENST00000309469 CNOT6LQ96LI5 555 aaKnown RBP23.63■■□□□ 1.37
ATG4D-201ENST00000309469 BHMT2Q9H2M3 363 aa23.63■■□□□ 1.37
ATG4D-201ENST00000309469 KCNH7Q9NS40 1196 aa23.63■■□□□ 1.37
ATG4D-201ENST00000309469 SNCAIPQ9Y6H5 919 aa23.63■■□□□ 1.37
ATG4D-201ENST00000309469 STX10O60499 249 aa23.63■■□□□ 1.37
ATG4D-201ENST00000309469 MRPS9P82933 396 aaKnown RBP23.63■■□□□ 1.37
ATG4D-201ENST00000309469 VGLL4Q14135 290 aa23.63■■□□□ 1.37
ATG4D-201ENST00000309469 EPHA7Q15375 998 aa23.63■■□□□ 1.37
ATG4D-201ENST00000309469 CEP135Q66GS9 1140 aa23.63■■□□□ 1.37
ATG4D-201ENST00000309469 NSMFQ6X4W1 530 aa23.63■■□□□ 1.37
ATG4D-201ENST00000309469 TPH2Q8IWU9 490 aa23.63■■□□□ 1.37
ATG4D-201ENST00000309469 MB21D1Q8N884 522 aa23.63■■□□□ 1.37
ATG4D-201ENST00000309469 PRIMPOLQ96LW4 560 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms