RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 TPH2Q8IWU9 490 aa13.92□□□□□ -0.18
RETREG3-201ENST00000309428 RWDD2AQ9UIY3 292 aa13.92□□□□□ -0.18
RETREG3-201ENST00000309428 LEMD3Q9Y2U8 911 aa13.92□□□□□ -0.18
RETREG3-201ENST00000309428 KCNK9Q9NPC2 374 aa13.91□□□□□ -0.18
RETREG3-201ENST00000309428 DMGDHQ9UI17 866 aaKnown RBP13.91□□□□□ -0.18
RETREG3-201ENST00000309428 FAM184BQ9ULE4 1060 aa13.91□□□□□ -0.18
RETREG3-201ENST00000309428 ODF2LQ9ULJ1 636 aa13.91□□□□□ -0.18
RETREG3-201ENST00000309428 LAMA4Q16363 1823 aa13.91□□□□□ -0.18
RETREG3-201ENST00000309428 SPDYE3A6NKU9 549 aa13.91□□□□□ -0.18
RETREG3-201ENST00000309428 H7C1D1 291 aa13.91□□□□□ -0.18
RETREG3-201ENST00000309428 KIAA0753Q2KHM9 967 aa13.91□□□□□ -0.18
RETREG3-201ENST00000309428 NAALADL2Q58DX5 795 aa13.91□□□□□ -0.18
RETREG3-201ENST00000309428 DAAM2Q86T65 1068 aa13.91□□□□□ -0.18
RETREG3-201ENST00000309428 TMEM139Q8IV31 216 aa13.91□□□□□ -0.18
RETREG3-201ENST00000309428 AP1M1Q9BXS5 423 aa13.91□□□□□ -0.18
RETREG3-201ENST00000309428 TRIM9Q9C026 710 aa13.91□□□□□ -0.18
RETREG3-201ENST00000309428 HPCAL4Q9UM19 191 aa13.91□□□□□ -0.18
RETREG3-201ENST00000309428 ZBTB12Q9Y330 459 aaPredicted RBP13.91□□□□□ -0.18
RETREG3-201ENST00000309428 GYS1P13807 737 aa13.91□□□□□ -0.18
RETREG3-201ENST00000309428 ARHGAP25P42331 645 aa13.91□□□□□ -0.18
RETREG3-201ENST00000309428 CORO7P57737 925 aa13.91□□□□□ -0.18
RETREG3-201ENST00000309428 TNNC1P63316 161 aa13.91□□□□□ -0.18
RETREG3-201ENST00000309428 GFPT1Q06210 699 aaPredicted RBP13.91□□□□□ -0.18
RETREG3-201ENST00000309428 SLFN13Q68D06 897 aa13.91□□□□□ -0.18
RETREG3-201ENST00000309428 ARFGAP2Q8N6H7 521 aa13.91□□□□□ -0.18
RETREG3-201ENST00000309428 LRRC15Q8TF66 581 aa13.91□□□□□ -0.18
RETREG3-201ENST00000309428 RTFDC1Q9BY42 306 aaPredicted RBP13.91□□□□□ -0.18
RETREG3-201ENST00000309428 ANAPC4Q9UJX5 808 aa13.91□□□□□ -0.18
RETREG3-201ENST00000309428 STRCP1A6NGW2 1772 aa13.9□□□□□ -0.18
RETREG3-201ENST00000309428 BICDL2A1A5D9 508 aa13.9□□□□□ -0.18
RETREG3-201ENST00000309428 PPP1R12BO60237 982 aaPredicted RBP13.9□□□□□ -0.18
RETREG3-201ENST00000309428 PRPF6O94906 941 aaKnown RBP13.9□□□□□ -0.18
RETREG3-201ENST00000309428 CERKLQ49MI3 558 aaPredicted RBP13.9□□□□□ -0.18
RETREG3-201ENST00000309428 CYP2W1Q8TAV3 490 aa13.9□□□□□ -0.18
RETREG3-201ENST00000309428 HDAC7Q8WUI4 952 aa13.9□□□□□ -0.18
RETREG3-201ENST00000309428 TEKT1Q969V4 418 aa13.9□□□□□ -0.18
RETREG3-201ENST00000309428 LSM14BQ9BX40 385 aaKnown RBP13.9□□□□□ -0.18
RETREG3-201ENST00000309428 CD248Q9HCU0 757 aa13.9□□□□□ -0.18
RETREG3-201ENST00000309428 ALS2Q96Q42 1657 aa13.9□□□□□ -0.18
RETREG3-201ENST00000309428 PDHBP11177 359 aa13.9□□□□□ -0.18
RETREG3-201ENST00000309428 ABCB4P21439 1286 aa13.9□□□□□ -0.18
RETREG3-201ENST00000309428 AOC3Q16853 763 aa13.9□□□□□ -0.18
RETREG3-201ENST00000309428 SLF2Q8IX21 1173 aa13.9□□□□□ -0.18
RETREG3-201ENST00000309428 OR2W6PQ8NHA6 318 aa13.9□□□□□ -0.18
RETREG3-201ENST00000309428 ARL8AQ96BM9 186 aa13.9□□□□□ -0.18
RETREG3-201ENST00000309428 NCAPGQ9BPX3 1015 aa13.9□□□□□ -0.18
RETREG3-201ENST00000309428 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.9□□□□□ -0.18
RETREG3-201ENST00000309428 CTDP1Q9Y5B0 961 aaPredicted RBP13.9□□□□□ -0.18
RETREG3-201ENST00000309428 CD2APQ9Y5K6 639 aa13.9□□□□□ -0.18
RETREG3-201ENST00000309428 PHRF1Q9P1Y6 1649 aaKnown RBP13.9□□□□□ -0.18
RETREG3-201ENST00000309428 ANKRD62A6NC57 917 aa13.9□□□□□ -0.19
RETREG3-201ENST00000309428 EPHB6O15197 1021 aa13.9□□□□□ -0.19
RETREG3-201ENST00000309428 GH2P01242 217 aa13.9□□□□□ -0.19
RETREG3-201ENST00000309428 TM4SF1P30408 202 aa13.9□□□□□ -0.19
RETREG3-201ENST00000309428 CHORDC1Q9UHD1 332 aaPredicted RBP13.9□□□□□ -0.19
RETREG3-201ENST00000309428 GOLGA8KD6RF30 607 aa13.89□□□□□ -0.19
RETREG3-201ENST00000309428 FGFR1OPO95684 399 aaKnown RBP13.89□□□□□ -0.19
RETREG3-201ENST00000309428 EEF2P13639 858 aaKnown RBP13.89□□□□□ -0.19
RETREG3-201ENST00000309428 NR1D1P20393 614 aa13.89□□□□□ -0.19
RETREG3-201ENST00000309428 ATP2B4P23634 1241 aa13.89□□□□□ -0.19
RETREG3-201ENST00000309428 ICA1Q05084 483 aa13.89□□□□□ -0.19
RETREG3-201ENST00000309428 DDR1Q08345 913 aa13.89□□□□□ -0.19
RETREG3-201ENST00000309428 KLHL30Q0D2K2 578 aa13.89□□□□□ -0.19
RETREG3-201ENST00000309428 CTTNQ14247 550 aaKnown RBP13.89□□□□□ -0.19
RETREG3-201ENST00000309428 RPAINQ86UA6 219 aa13.89□□□□□ -0.19
RETREG3-201ENST00000309428 GJD4Q96KN9 370 aaPredicted RBP13.89□□□□□ -0.19
RETREG3-201ENST00000309428 PANK4Q9NVE7 773 aa13.89□□□□□ -0.19
RETREG3-201ENST00000309428 RGL1Q9NZL6 768 aa13.89□□□□□ -0.19
RETREG3-201ENST00000309428 GGT7Q9UJ14 662 aa13.89□□□□□ -0.19
RETREG3-201ENST00000309428 MYH13Q9UKX3 1938 aa13.89□□□□□ -0.19
RETREG3-201ENST00000309428 TULP2O00295 520 aa13.89□□□□□ -0.19
RETREG3-201ENST00000309428 ACTN1P12814 892 aa13.89□□□□□ -0.19
RETREG3-201ENST00000309428 GUCY2CP25092 1073 aa13.89□□□□□ -0.19
RETREG3-201ENST00000309428 SLCO1A2P46721 670 aa13.89□□□□□ -0.19
RETREG3-201ENST00000309428 MRPL12P52815 198 aaKnown RBP13.89□□□□□ -0.19
RETREG3-201ENST00000309428 ADSSL1Q8N142 457 aa13.89□□□□□ -0.19
RETREG3-201ENST00000309428 SEMA3EO15041 775 aa13.88□□□□□ -0.19
RETREG3-201ENST00000309428 C21orf2O43822 256 aa13.88□□□□□ -0.19
RETREG3-201ENST00000309428 GCNT3O95395 438 aa13.88□□□□□ -0.19
RETREG3-201ENST00000309428 PLCG2P16885 1265 aa13.88□□□□□ -0.19
RETREG3-201ENST00000309428 HNRNPH1P31943 449 aaKnown RBP13.88□□□□□ -0.19
RETREG3-201ENST00000309428 HIBCHQ6NVY1 386 aaPredicted RBP13.88□□□□□ -0.19
RETREG3-201ENST00000309428 CNNM4Q6P4Q7 775 aa13.88□□□□□ -0.19
RETREG3-201ENST00000309428 FAM133AQ8N9E0 248 aa13.88□□□□□ -0.19
RETREG3-201ENST00000309428 ADAMTS1Q9UHI8 967 aa13.88□□□□□ -0.19
RETREG3-201ENST00000309428 LRRC53A6NM62 1247 aa13.88□□□□□ -0.19
RETREG3-201ENST00000309428 CYP2J2P51589 502 aa13.88□□□□□ -0.19
RETREG3-201ENST00000309428 ARHGAP44Q17R89 818 aa13.88□□□□□ -0.19
RETREG3-201ENST00000309428 SLC9C1Q4G0N8 1177 aa13.88□□□□□ -0.19
RETREG3-201ENST00000309428 VPS36Q86VN1 386 aa13.88□□□□□ -0.19
RETREG3-201ENST00000309428 CCDC170Q8IYT3 715 aa13.88□□□□□ -0.19
RETREG3-201ENST00000309428 CUL5Q93034 780 aa13.88□□□□□ -0.19
RETREG3-201ENST00000309428 PYM1Q9BRP8 204 aaKnown RBP13.88□□□□□ -0.19
RETREG3-201ENST00000309428 FGFBP2Q9BYJ0 223 aa13.88□□□□□ -0.19
RETREG3-201ENST00000309428 TSGA10Q9BZW7 698 aa13.88□□□□□ -0.19
RETREG3-201ENST00000309428 ZSCAN5CA6NGD5 496 aaPredicted RBP13.88□□□□□ -0.19
RETREG3-201ENST00000309428 ZBTB39O15060 712 aa13.88□□□□□ -0.19
RETREG3-201ENST00000309428 KIF11P52732 1056 aa13.88□□□□□ -0.19
RETREG3-201ENST00000309428 RPS6KA1Q15418 735 aa13.88□□□□□ -0.19
RETREG3-201ENST00000309428 QRICH1Q2TAL8 776 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms