RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 MAD2L2Q9UI95 211 aa12.23□□□□□ -0.45
PTPN7-201ENST00000309017 GRID2IPA4D2P6 1211 aa12.23□□□□□ -0.45
PTPN7-201ENST00000309017 IFI16Q16666 785 aaKnown RBP12.23□□□□□ -0.45
PTPN7-201ENST00000309017 FAM26FQ5R3K3 315 aa12.23□□□□□ -0.45
PTPN7-201ENST00000309017 GKAP1Q5VSY0 366 aaPredicted RBP12.23□□□□□ -0.45
PTPN7-201ENST00000309017 CCDC113Q9H0I3 377 aa12.23□□□□□ -0.45
PTPN7-201ENST00000309017 HAUS2Q9NVX0 235 aa12.23□□□□□ -0.45
PTPN7-201ENST00000309017 BTG4Q9NY30 223 aa12.23□□□□□ -0.45
PTPN7-201ENST00000309017 FBXL5Q9UKA1 691 aa12.23□□□□□ -0.45
PTPN7-201ENST00000309017 RAD21O60216 631 aa12.22□□□□□ -0.45
PTPN7-201ENST00000309017 KLRK1P26718 216 aa12.22□□□□□ -0.45
PTPN7-201ENST00000309017 FNTAP49354 379 aa12.22□□□□□ -0.45
PTPN7-201ENST00000309017 ITGB3BPQ13352 177 aaPredicted RBP12.22□□□□□ -0.45
PTPN7-201ENST00000309017 SLC18A3Q16572 532 aa12.22□□□□□ -0.45
PTPN7-201ENST00000309017 PEX26Q7Z412 305 aa12.22□□□□□ -0.45
PTPN7-201ENST00000309017 TGFBRAP1Q8WUH2 860 aa12.22□□□□□ -0.45
PTPN7-201ENST00000309017 TMEM47Q9BQJ4 181 aa12.22□□□□□ -0.45
PTPN7-201ENST00000309017 LRRC27Q9C0I9 530 aa12.22□□□□□ -0.45
PTPN7-201ENST00000309017 IL17RBQ9NRM6 502 aa12.22□□□□□ -0.45
PTPN7-201ENST00000309017 STK17AQ9UEE5 414 aa12.22□□□□□ -0.45
PTPN7-201ENST00000309017 PVALEFA0A1B0GWK0 134 aa12.22□□□□□ -0.45
PTPN7-201ENST00000309017 CRKLP46109 303 aaKnown RBP12.22□□□□□ -0.45
PTPN7-201ENST00000309017 SMTNP53814 917 aa12.22□□□□□ -0.45
PTPN7-201ENST00000309017 MAGOHP61326 146 aaKnown RBP12.22□□□□□ -0.45
PTPN7-201ENST00000309017 ERVK-9P63128 1117 aa12.22□□□□□ -0.45
PTPN7-201ENST00000309017 HERC4Q5GLZ8 1057 aaPredicted RBP12.22□□□□□ -0.45
PTPN7-201ENST00000309017 PPP4R3AQ6IN85 833 aa12.22□□□□□ -0.45
PTPN7-201ENST00000309017 MAPKAPK5Q8IW41 473 aa12.22□□□□□ -0.45
PTPN7-201ENST00000309017 CCDC24Q8N4L8 307 aa12.22□□□□□ -0.45
PTPN7-201ENST00000309017 ZNF384Q8TF68 577 aa12.22□□□□□ -0.45
PTPN7-201ENST00000309017 ZKSCAN4Q969J2 545 aaPredicted RBP12.22□□□□□ -0.45
PTPN7-201ENST00000309017 MAGOHBQ96A72 148 aaKnown RBP12.22□□□□□ -0.45
PTPN7-201ENST00000309017 TMBIM4Q9HC24 238 aa12.22□□□□□ -0.45
PTPN7-201ENST00000309017 ZNF652Q9Y2D9 606 aa12.22□□□□□ -0.45
PTPN7-201ENST00000309017 FRMD3A2A2Y4 597 aa12.22□□□□□ -0.45
PTPN7-201ENST00000309017 LCA5LO95447 670 aa12.22□□□□□ -0.45
PTPN7-201ENST00000309017 FGRP09769 529 aa12.22□□□□□ -0.45
PTPN7-201ENST00000309017 GBP2P32456 591 aaPredicted RBP12.22□□□□□ -0.45
PTPN7-201ENST00000309017 GRB10Q13322 594 aa12.22□□□□□ -0.45
PTPN7-201ENST00000309017 ADAT2Q7Z6V5 191 aaKnown RBP12.22□□□□□ -0.45
PTPN7-201ENST00000309017 PIGSQ96S52 555 aa12.22□□□□□ -0.45
PTPN7-201ENST00000309017 ACTR5Q9H9F9 607 aaPredicted RBP12.22□□□□□ -0.45
PTPN7-201ENST00000309017 RIC8AQ9NPQ8 531 aa12.22□□□□□ -0.45
PTPN7-201ENST00000309017 PANK4Q9NVE7 773 aa12.22□□□□□ -0.45
PTPN7-201ENST00000309017 BAIAP2L1Q9UHR4 511 aa12.22□□□□□ -0.45
PTPN7-201ENST00000309017 MINPP1Q9UNW1 487 aa12.22□□□□□ -0.45
PTPN7-201ENST00000309017 PGRMC1O00264 195 aaKnown RBP12.21□□□□□ -0.45
PTPN7-201ENST00000309017 SART1O43290 800 aaKnown RBP12.21□□□□□ -0.45
PTPN7-201ENST00000309017 DAPK3O43293 454 aa12.21□□□□□ -0.45
PTPN7-201ENST00000309017 DHX9Q08211 1270 aaKnown RBP12.21□□□□□ -0.45
PTPN7-201ENST00000309017 DCAF17Q5H9S7 520 aaPredicted RBP12.21□□□□□ -0.45
PTPN7-201ENST00000309017 MEI1Q5TIA1 1274 aa12.21□□□□□ -0.45
PTPN7-201ENST00000309017 AMACRQ9UHK6 382 aa12.21□□□□□ -0.45
PTPN7-201ENST00000309017 DUOX1Q9NRD9 1551 aa12.21□□□□□ -0.45
PTPN7-201ENST00000309017 PHF20L1A8MW92 1017 aa12.21□□□□□ -0.45
PTPN7-201ENST00000309017 TDP2O95551 362 aa12.21□□□□□ -0.45
PTPN7-201ENST00000309017 PPP2R2AP63151 447 aa12.21□□□□□ -0.45
PTPN7-201ENST00000309017 MTMR3Q13615 1198 aa12.21□□□□□ -0.45
PTPN7-201ENST00000309017 CUL1Q13616 776 aa12.21□□□□□ -0.45
PTPN7-201ENST00000309017 ERFEQ4G0M1 354 aa12.21□□□□□ -0.45
PTPN7-201ENST00000309017 HGSNATQ68CP4 663 aa12.21□□□□□ -0.45
PTPN7-201ENST00000309017 DAAM2Q86T65 1068 aa12.21□□□□□ -0.45
PTPN7-201ENST00000309017 VPS36Q86VN1 386 aa12.21□□□□□ -0.45
PTPN7-201ENST00000309017 CCDC26Q8TAB7 109 aa12.21□□□□□ -0.45
PTPN7-201ENST00000309017 PIK3R5Q8WYR1 880 aa12.21□□□□□ -0.45
PTPN7-201ENST00000309017 ISCUQ9H1K1 167 aa12.21□□□□□ -0.45
PTPN7-201ENST00000309017 SEPT11Q9NVA2 429 aaKnown RBP12.21□□□□□ -0.45
PTPN7-201ENST00000309017 DDX20Q9UHI6 824 aaKnown RBP12.21□□□□□ -0.45
PTPN7-201ENST00000309017 ATP8A1Q9Y2Q0 1164 aa12.21□□□□□ -0.45
PTPN7-201ENST00000309017 PDHBP11177 359 aa12.21□□□□□ -0.46
PTPN7-201ENST00000309017 HSPA9P38646 679 aaKnown RBP12.21□□□□□ -0.46
PTPN7-201ENST00000309017 KCNMA1Q12791 1236 aa12.21□□□□□ -0.46
PTPN7-201ENST00000309017 SPTY2D1Q68D10 685 aaPredicted RBP12.21□□□□□ -0.46
PTPN7-201ENST00000309017 PARP9Q8IXQ6 854 aa12.21□□□□□ -0.46
PTPN7-201ENST00000309017 MREGQ8N565 214 aa12.21□□□□□ -0.46
PTPN7-201ENST00000309017 ANKS1AQ92625 1134 aa12.21□□□□□ -0.46
PTPN7-201ENST00000309017 CELF1Q92879 486 aaKnown RBP12.21□□□□□ -0.46
PTPN7-201ENST00000309017 TBC1D31Q96DN5 1066 aa12.21□□□□□ -0.46
PTPN7-201ENST00000309017 MMTAG2Q9BU76 263 aaKnown RBP12.21□□□□□ -0.46
PTPN7-201ENST00000309017 EDEM3Q9BZQ6 932 aa12.21□□□□□ -0.46
PTPN7-201ENST00000309017 VEZTQ9HBM0 779 aa12.21□□□□□ -0.46
PTPN7-201ENST00000309017 SUFUQ9UMX1 484 aa12.21□□□□□ -0.46
PTPN7-201ENST00000309017 ZNF804BA4D1E1 1349 aa12.2□□□□□ -0.46
PTPN7-201ENST00000309017 COL5A2P05997 1499 aaPredicted RBP12.2□□□□□ -0.46
PTPN7-201ENST00000309017 KIF4AO95239 1232 aa12.2□□□□□ -0.46
PTPN7-201ENST00000309017 RPSAP08865 295 aaKnown RBP12.2□□□□□ -0.46
PTPN7-201ENST00000309017 PPP1R7Q15435 360 aa12.2□□□□□ -0.46
PTPN7-201ENST00000309017 YTHDF3Q7Z739 585 aaKnown RBP12.2□□□□□ -0.46
PTPN7-201ENST00000309017 TAX1BP1Q86VP1 789 aa12.2□□□□□ -0.46
PTPN7-201ENST00000309017 CD302Q8IX05 232 aa12.2□□□□□ -0.46
PTPN7-201ENST00000309017 DAGLBQ8NCG7 672 aa12.2□□□□□ -0.46
PTPN7-201ENST00000309017 RAD54LQ92698 747 aa12.2□□□□□ -0.46
PTPN7-201ENST00000309017 COA7Q96BR5 231 aa12.2□□□□□ -0.46
PTPN7-201ENST00000309017 SEC16BQ96JE7 1060 aa12.2□□□□□ -0.46
PTPN7-201ENST00000309017 INPP4AQ96PE3 977 aaPredicted RBP12.2□□□□□ -0.46
PTPN7-201ENST00000309017 PLCB1Q9NQ66 1216 aa12.2□□□□□ -0.46
PTPN7-201ENST00000309017 BLOC1S4Q9NUP1 217 aa12.2□□□□□ -0.46
PTPN7-201ENST00000309017 UTP11Q9Y3A2 253 aaKnown RBP12.2□□□□□ -0.46
PTPN7-201ENST00000309017 TLR2O60603 784 aa12.2□□□□□ -0.46
PTPN7-201ENST00000309017 ECM2O94769 699 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms