RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 LGALS2P05162 132 aa22.76■■□□□ 1.23
PDZRN3-202ENST00000308537 DNAJB2P25686 324 aa22.76■■□□□ 1.23
PDZRN3-202ENST00000308537 PBX2P40425 430 aa22.76■■□□□ 1.23
PDZRN3-202ENST00000308537 METAP2P50579 478 aaKnown RBP eCLIP22.76■■□□□ 1.23
PDZRN3-202ENST00000308537 CHMP4BP1P59074 171 aa22.76■■□□□ 1.23
PDZRN3-202ENST00000308537 ZNF200P98182 395 aaPredicted RBP22.76■■□□□ 1.23
PDZRN3-202ENST00000308537 TOB2Q14106 344 aaPredicted RBP22.76■■□□□ 1.23
PDZRN3-202ENST00000308537 NEDD9Q14511 834 aa22.76■■□□□ 1.23
PDZRN3-202ENST00000308537 OTOP2Q7RTS6 562 aa22.76■■□□□ 1.23
PDZRN3-202ENST00000308537 GPRASP2Q96D09 838 aa22.76■■□□□ 1.23
PDZRN3-202ENST00000308537 KATNAL1Q9BW62 490 aa22.76■■□□□ 1.23
PDZRN3-202ENST00000308537 PBX4Q9BYU1 374 aa22.76■■□□□ 1.23
PDZRN3-202ENST00000308537 MLXIPQ9HAP2 919 aa22.76■■□□□ 1.23
PDZRN3-202ENST00000308537 UNC80Q8N2C7 3258 aa22.76■■□□□ 1.23
PDZRN3-202ENST00000308537 TMEM265A0A087WTH1 108 aa22.75■■□□□ 1.23
PDZRN3-202ENST00000308537 hCG_1984214I3L0E3 225 aa22.75■■□□□ 1.23
PDZRN3-202ENST00000308537 NAPAP54920 295 aa22.75■■□□□ 1.23
PDZRN3-202ENST00000308537 PFKFB3Q16875 520 aaPredicted RBP22.75■■□□□ 1.23
PDZRN3-202ENST00000308537 TEX2Q8IWB9 1127 aa22.75■■□□□ 1.23
PDZRN3-202ENST00000308537 ZNF713Q8N859 430 aaPredicted RBP22.75■■□□□ 1.23
PDZRN3-202ENST00000308537 PRUNE2Q8WUY3 3088 aa22.75■■□□□ 1.23
PDZRN3-202ENST00000308537 CAGE1Q8TC20 777 aa22.74■■□□□ 1.23
PDZRN3-202ENST00000308537 CRYGNQ8WXF5 182 aa22.74■■□□□ 1.23
PDZRN3-202ENST00000308537 PGBD1Q96JS3 809 aa22.74■■□□□ 1.23
PDZRN3-202ENST00000308537 CDX2Q99626 313 aaPredicted RBP22.74■■□□□ 1.23
PDZRN3-202ENST00000308537 A0A0C4DFX4 3053 aa22.74■■□□□ 1.23
PDZRN3-202ENST00000308537 SPDYE3A6NKU9 549 aa22.73■■□□□ 1.23
PDZRN3-202ENST00000308537 H3BRB1 525 aa22.73■■□□□ 1.23
PDZRN3-202ENST00000308537 PFKMP08237 780 aa22.73■■□□□ 1.23
PDZRN3-202ENST00000308537 PSMA5P28066 241 aa22.73■■□□□ 1.23
PDZRN3-202ENST00000308537 PDIA3P30101 505 aaKnown RBP22.73■■□□□ 1.23
PDZRN3-202ENST00000308537 BFSP2Q13515 415 aa22.73■■□□□ 1.23
PDZRN3-202ENST00000308537 RUFY3Q7L099 469 aa22.73■■□□□ 1.23
PDZRN3-202ENST00000308537 DEFB128Q7Z7B8 93 aa22.73■■□□□ 1.23
PDZRN3-202ENST00000308537 NLRX1Q86UT6 975 aa22.73■■□□□ 1.23
PDZRN3-202ENST00000308537 TRIM50Q86XT4 487 aa22.73■■□□□ 1.23
PDZRN3-202ENST00000308537 RPUSD2Q8IZ73 545 aaKnown RBP22.73■■□□□ 1.23
PDZRN3-202ENST00000308537 C7orf31Q8N865 590 aa22.73■■□□□ 1.23
PDZRN3-202ENST00000308537 CYP2W1Q8TAV3 490 aa22.73■■□□□ 1.23
PDZRN3-202ENST00000308537 AFAP1L1Q8TED9 768 aa22.73■■□□□ 1.23
PDZRN3-202ENST00000308537 TUT1Q9H6E5 874 aaKnown RBP22.73■■□□□ 1.23
PDZRN3-202ENST00000308537 JADE2Q9NQC1 790 aa22.73■■□□□ 1.23
PDZRN3-202ENST00000308537 TMEM260Q9NX78 707 aa22.73■■□□□ 1.23
PDZRN3-202ENST00000308537 SMCO2A6NFE2 343 aa22.72■■□□□ 1.23
PDZRN3-202ENST00000308537 RFC2P35250 354 aa22.72■■□□□ 1.23
PDZRN3-202ENST00000308537 MBTPS1Q14703 1052 aa22.72■■□□□ 1.23
PDZRN3-202ENST00000308537 ANO3Q9BYT9 981 aa22.72■■□□□ 1.23
PDZRN3-202ENST00000308537 TM6SF1Q9BZW5 370 aa22.72■■□□□ 1.23
PDZRN3-202ENST00000308537 NOD1Q9Y239 953 aa22.72■■□□□ 1.23
PDZRN3-202ENST00000308537 GSTTP1A0A1W2PQM5 241 aa22.71■■□□□ 1.23
PDZRN3-202ENST00000308537 ESYT2A0FGR8 921 aa22.71■■□□□ 1.23
PDZRN3-202ENST00000308537 PRPF3O43395 683 aaKnown RBP22.71■■□□□ 1.23
PDZRN3-202ENST00000308537 CKBP12277 381 aa22.71■■□□□ 1.23
PDZRN3-202ENST00000308537 SCG2P13521 617 aa22.71■■□□□ 1.23
PDZRN3-202ENST00000308537 ADCY7P51828 1080 aa22.71■■□□□ 1.23
PDZRN3-202ENST00000308537 ADAM17P78536 824 aa22.71■■□□□ 1.23
PDZRN3-202ENST00000308537 FGD1P98174 961 aa22.71■■□□□ 1.23
PDZRN3-202ENST00000308537 PTK7Q13308 1070 aa22.71■■□□□ 1.23
PDZRN3-202ENST00000308537 TCTN1Q2MV58 587 aa22.71■■□□□ 1.23
PDZRN3-202ENST00000308537 SERINC5Q86VE9 423 aa22.71■■□□□ 1.23
PDZRN3-202ENST00000308537 PHKBQ93100 1093 aa22.71■■□□□ 1.23
PDZRN3-202ENST00000308537 RNPEPQ9H4A4 650 aa22.71■■□□□ 1.23
PDZRN3-202ENST00000308537 YBX2Q9Y2T7 364 aaKnown RBP22.71■■□□□ 1.23
PDZRN3-202ENST00000308537 KAT6AQ92794 2004 aa22.7■■□□□ 1.23
PDZRN3-202ENST00000308537 CCDC196A0A1B0GTZ2 297 aa22.7■■□□□ 1.22
PDZRN3-202ENST00000308537 NBNO60934 754 aa22.7■■□□□ 1.22
PDZRN3-202ENST00000308537 CXCL10P02778 98 aa22.7■■□□□ 1.22
PDZRN3-202ENST00000308537 SMIM10L2AP0DMW4 78 aa22.7■■□□□ 1.22
PDZRN3-202ENST00000308537 SMIM10L2BP0DMW5 78 aa22.7■■□□□ 1.22
PDZRN3-202ENST00000308537 SELPP16109 830 aa22.7■■□□□ 1.22
PDZRN3-202ENST00000308537 SREBF1P36956 1147 aa22.7■■□□□ 1.22
PDZRN3-202ENST00000308537 GRIN2CQ14957 1233 aa22.7■■□□□ 1.22
PDZRN3-202ENST00000308537 LRRC8DQ7L1W4 858 aa22.7■■□□□ 1.22
PDZRN3-202ENST00000308537 TIFAQ96CG3 184 aa22.7■■□□□ 1.22
PDZRN3-202ENST00000308537 MXRA8Q9BRK3 442 aa22.7■■□□□ 1.22
PDZRN3-202ENST00000308537 ZMYND12Q9H0C1 365 aa22.7■■□□□ 1.22
PDZRN3-202ENST00000308537 NCOA5Q9HCD5 579 aaKnown RBP22.7■■□□□ 1.22
PDZRN3-202ENST00000308537 KCNH7Q9NS40 1196 aa22.7■■□□□ 1.22
PDZRN3-202ENST00000308537 NAP1L2Q9ULW6 460 aaPredicted RBP22.7■■□□□ 1.22
PDZRN3-202ENST00000308537 NOP56O00567 594 aaKnown RBP22.69■■□□□ 1.22
PDZRN3-202ENST00000308537 MAFGO15525 162 aa22.69■■□□□ 1.22
PDZRN3-202ENST00000308537 PPFIA3O75145 1194 aa22.69■■□□□ 1.22
PDZRN3-202ENST00000308537 FOSP01100 380 aaPredicted RBP22.69■■□□□ 1.22
PDZRN3-202ENST00000308537 IFNAR1P17181 557 aa22.69■■□□□ 1.22
PDZRN3-202ENST00000308537 AP3B2Q13367 1082 aa22.69■■□□□ 1.22
PDZRN3-202ENST00000308537 MTMR1Q13613 665 aa22.69■■□□□ 1.22
PDZRN3-202ENST00000308537 RETREG2Q8NC44 543 aa22.69■■□□□ 1.22
PDZRN3-202ENST00000308537 CDHR1Q96JP9 859 aa22.69■■□□□ 1.22
PDZRN3-202ENST00000308537 UPF3BQ9BZI7 483 aaKnown RBP22.69■■□□□ 1.22
PDZRN3-202ENST00000308537 SIP14410 1827 aa22.68■■□□□ 1.22
PDZRN3-202ENST00000308537 EDIL3O43854 480 aa22.68■■□□□ 1.22
PDZRN3-202ENST00000308537 ARP10275 920 aa22.68■■□□□ 1.22
PDZRN3-202ENST00000308537 SP4Q02446 784 aa22.68■■□□□ 1.22
PDZRN3-202ENST00000308537 ZNF618Q5T7W0 954 aa22.68■■□□□ 1.22
PDZRN3-202ENST00000308537 GIMAP8Q8ND71 665 aaPredicted RBP22.68■■□□□ 1.22
PDZRN3-202ENST00000308537 MYLIPQ8WY64 445 aa22.68■■□□□ 1.22
PDZRN3-202ENST00000308537 PCYT2Q99447 389 aa22.68■■□□□ 1.22
PDZRN3-202ENST00000308537 RNF26Q9BY78 433 aaPredicted RBP22.68■■□□□ 1.22
PDZRN3-202ENST00000308537 ZNF576Q9H609 170 aa22.68■■□□□ 1.22
PDZRN3-202ENST00000308537 CUL9Q8IWT3 2517 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms