RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 HOXD8P13378 290 aaPredicted RBP13.87□□□□□ -0.19
SMIM4-201ENST00000307106 RRP1P56182 461 aaKnown RBP13.87□□□□□ -0.19
SMIM4-201ENST00000307106 ZNF543Q08ER8 600 aa13.87□□□□□ -0.19
SMIM4-201ENST00000307106 CBX2Q14781 532 aaPredicted RBP13.87□□□□□ -0.19
SMIM4-201ENST00000307106 ASCL5Q7RTU5 278 aa13.87□□□□□ -0.19
SMIM4-201ENST00000307106 ERMP1Q7Z2K6 904 aa13.87□□□□□ -0.19
SMIM4-201ENST00000307106 SMRP1Q8NCR6 262 aa13.87□□□□□ -0.19
SMIM4-201ENST00000307106 APBB2Q92870 758 aa13.87□□□□□ -0.19
SMIM4-201ENST00000307106 PPP2R3CQ969Q6 453 aa13.87□□□□□ -0.19
SMIM4-201ENST00000307106 GPATCH3Q96I76 525 aa13.87□□□□□ -0.19
SMIM4-201ENST00000307106 FSD1Q9BTV5 496 aa13.87□□□□□ -0.19
SMIM4-201ENST00000307106 DDX19BQ9UMR2 479 aa13.87□□□□□ -0.19
SMIM4-201ENST00000307106 FNDC1Q4ZHG4 1894 aaPredicted RBP13.87□□□□□ -0.19
SMIM4-201ENST00000307106 TREHO43280 583 aa13.86□□□□□ -0.19
SMIM4-201ENST00000307106 ORC4O43929 436 aa13.86□□□□□ -0.19
SMIM4-201ENST00000307106 CAND2O75155 1236 aa13.86□□□□□ -0.19
SMIM4-201ENST00000307106 EIF3JO75822 258 aaKnown RBP13.86□□□□□ -0.19
SMIM4-201ENST00000307106 COASYQ13057 564 aa13.86□□□□□ -0.19
SMIM4-201ENST00000307106 HSDL1Q3SXM5 330 aa13.86□□□□□ -0.19
SMIM4-201ENST00000307106 ARHGEF16Q5VV41 709 aa13.86□□□□□ -0.19
SMIM4-201ENST00000307106 CLP1Q92989 425 aaKnown RBP13.86□□□□□ -0.19
SMIM4-201ENST00000307106 MAF1Q9H063 256 aa13.86□□□□□ -0.19
SMIM4-201ENST00000307106 TOMM22Q9NS69 142 aa13.86□□□□□ -0.19
SMIM4-201ENST00000307106 CLEC1BQ9P126 229 aa13.86□□□□□ -0.19
SMIM4-201ENST00000307106 FOXP2O15409 715 aa13.85□□□□□ -0.19
SMIM4-201ENST00000307106 SORBS3O60504 671 aa13.85□□□□□ -0.19
SMIM4-201ENST00000307106 MS4A1P11836 297 aa13.85□□□□□ -0.19
SMIM4-201ENST00000307106 EIF2AK2P19525 551 aaKnown RBP13.85□□□□□ -0.19
SMIM4-201ENST00000307106 HOXC8P31273 242 aa13.85□□□□□ -0.19
SMIM4-201ENST00000307106 CAMK1Q14012 370 aa13.85□□□□□ -0.19
SMIM4-201ENST00000307106 RRP12Q5JTH9 1297 aaKnown RBP13.85□□□□□ -0.19
SMIM4-201ENST00000307106 MYSM1Q5VVJ2 828 aa13.85□□□□□ -0.19
SMIM4-201ENST00000307106 ADGRD2Q7Z7M1 963 aa13.85□□□□□ -0.19
SMIM4-201ENST00000307106 RPGRIP1Q96KN7 1286 aa13.85□□□□□ -0.19
SMIM4-201ENST00000307106 SPATA33Q96N06 139 aa13.85□□□□□ -0.19
SMIM4-201ENST00000307106 C16orf70Q9BSU1 422 aa13.85□□□□□ -0.19
SMIM4-201ENST00000307106 PLVAPQ9BX97 442 aa13.85□□□□□ -0.19
SMIM4-201ENST00000307106 RC3H2Q9HBD1 1191 aaKnown RBP13.85□□□□□ -0.19
SMIM4-201ENST00000307106 ANAPC4Q9UJX5 808 aa13.85□□□□□ -0.19
SMIM4-201ENST00000307106 USP15Q9Y4E8 981 aaPredicted RBP13.85□□□□□ -0.19
SMIM4-201ENST00000307106 ABCB11O95342 1321 aa13.85□□□□□ -0.19
SMIM4-201ENST00000307106 VPS13AQ96RL7 3174 aa13.85□□□□□ -0.19
SMIM4-201ENST00000307106 PRR23AA6NEV1 266 aa13.84□□□□□ -0.19
SMIM4-201ENST00000307106 KDM4AO75164 1064 aa13.84□□□□□ -0.19
SMIM4-201ENST00000307106 NR3C2P08235 984 aa13.84□□□□□ -0.19
SMIM4-201ENST00000307106 SMIM10L2AP0DMW4 78 aa13.84□□□□□ -0.19
SMIM4-201ENST00000307106 SMIM10L2BP0DMW5 78 aa13.84□□□□□ -0.19
SMIM4-201ENST00000307106 SNHG28P0DPA3 235 aa13.84□□□□□ -0.19
SMIM4-201ENST00000307106 NUBP1P53384 320 aa13.84□□□□□ -0.19
SMIM4-201ENST00000307106 BTG3Q14201 252 aaPredicted RBP13.84□□□□□ -0.19
SMIM4-201ENST00000307106 CDC37Q16543 378 aaPredicted RBP13.84□□□□□ -0.19
SMIM4-201ENST00000307106 ZMYM1Q5SVZ6 1142 aa13.84□□□□□ -0.19
SMIM4-201ENST00000307106 CELF3Q5SZQ8 465 aaKnown RBP13.84□□□□□ -0.19
SMIM4-201ENST00000307106 MCF2L2Q86YR7 1114 aa13.84□□□□□ -0.19
SMIM4-201ENST00000307106 EFHBQ8N7U6 833 aa13.84□□□□□ -0.19
SMIM4-201ENST00000307106 PHF7Q9BWX1 381 aaPredicted RBP13.84□□□□□ -0.19
SMIM4-201ENST00000307106 CPVLQ9H3G5 476 aa13.84□□□□□ -0.19
SMIM4-201ENST00000307106 RNPEPQ9H4A4 650 aa13.84□□□□□ -0.19
SMIM4-201ENST00000307106 PXMP2Q9NR77 195 aa13.84□□□□□ -0.19
SMIM4-201ENST00000307106 TCP11L1Q9NUJ3 509 aa13.84□□□□□ -0.19
SMIM4-201ENST00000307106 BARX2Q9UMQ3 279 aaPredicted RBP13.84□□□□□ -0.19
SMIM4-201ENST00000307106 PLAGL2Q9UPG8 496 aa13.84□□□□□ -0.19
SMIM4-201ENST00000307106 TRPC6Q9Y210 931 aa13.84□□□□□ -0.19
SMIM4-201ENST00000307106 LAMA4Q16363 1823 aa13.84□□□□□ -0.19
SMIM4-201ENST00000307106 H3BRB1 525 aa13.83□□□□□ -0.2
SMIM4-201ENST00000307106 GGPS1O95749 300 aa13.83□□□□□ -0.2
SMIM4-201ENST00000307106 GLP2RO95838 553 aa13.83□□□□□ -0.2
SMIM4-201ENST00000307106 FGRP09769 529 aa13.83□□□□□ -0.2
SMIM4-201ENST00000307106 GOLGA8HP0CJ92 632 aa13.83□□□□□ -0.2
SMIM4-201ENST00000307106 DNAJB1P25685 340 aa13.83□□□□□ -0.2
SMIM4-201ENST00000307106 ICAM3P32942 547 aa13.83□□□□□ -0.2
SMIM4-201ENST00000307106 ID4P47928 161 aa13.83□□□□□ -0.2
SMIM4-201ENST00000307106 PTPN21Q16825 1174 aa13.83□□□□□ -0.2
SMIM4-201ENST00000307106 P2RX5Q93086 422 aa13.83□□□□□ -0.2
SMIM4-201ENST00000307106 TUT1Q9H6E5 874 aaKnown RBP13.83□□□□□ -0.2
SMIM4-201ENST00000307106 GALR2O43603 387 aaPredicted RBP13.82□□□□□ -0.2
SMIM4-201ENST00000307106 PDGFBP01127 241 aaPredicted RBP13.82□□□□□ -0.2
SMIM4-201ENST00000307106 NRIP1P48552 1158 aa13.82□□□□□ -0.2
SMIM4-201ENST00000307106 FAM26DQ5JW98 314 aa13.82□□□□□ -0.2
SMIM4-201ENST00000307106 GPATCH4Q5T3I0 446 aaKnown RBP13.82□□□□□ -0.2
SMIM4-201ENST00000307106 KCNV1Q6PIU1 500 aa13.82□□□□□ -0.2
SMIM4-201ENST00000307106 RBM23Q86U06 439 aaKnown RBP13.82□□□□□ -0.2
SMIM4-201ENST00000307106 ZNF689Q96CS4 500 aaPredicted RBP13.82□□□□□ -0.2
SMIM4-201ENST00000307106 UBA5Q9GZZ9 404 aa13.82□□□□□ -0.2
SMIM4-201ENST00000307106 CCDC171Q6TFL3 1326 aa13.82□□□□□ -0.2
SMIM4-201ENST00000307106 CCER2I3L3R5 266 aa13.81□□□□□ -0.2
SMIM4-201ENST00000307106 DGKIO75912 1065 aa13.81□□□□□ -0.2
SMIM4-201ENST00000307106 RGS20O76081 388 aa13.81□□□□□ -0.2
SMIM4-201ENST00000307106 LGALS2P05162 132 aa13.81□□□□□ -0.2
SMIM4-201ENST00000307106 ITGB1P05556 798 aa13.81□□□□□ -0.2
SMIM4-201ENST00000307106 HSPD1P10809 573 aaKnown RBP13.81□□□□□ -0.2
SMIM4-201ENST00000307106 GNAT1P11488 350 aa13.81□□□□□ -0.2
SMIM4-201ENST00000307106 MYCLP12524 364 aaPredicted RBP13.81□□□□□ -0.2
SMIM4-201ENST00000307106 UBA1P22314 1058 aaKnown RBP13.81□□□□□ -0.2
SMIM4-201ENST00000307106 NBL1P41271 181 aa13.81□□□□□ -0.2
SMIM4-201ENST00000307106 VPS53Q5VIR6 699 aa13.81□□□□□ -0.2
SMIM4-201ENST00000307106 SPPL3Q8TCT6 385 aa13.81□□□□□ -0.2
SMIM4-201ENST00000307106 RIPOR3Q96MK2 946 aa13.81□□□□□ -0.2
SMIM4-201ENST00000307106 TTC14Q96N46 770 aa13.81□□□□□ -0.2
SMIM4-201ENST00000307106 MLXIPQ9HAP2 919 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms