RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 CLK2P49760 499 aaKnown RBP15.77■□□□□ 0.12
RAB40A-201ENST00000304236 FKBP1AP62942 108 aaKnown RBP15.77■□□□□ 0.12
RAB40A-201ENST00000304236 LRRC63Q05C16 580 aa15.77■□□□□ 0.12
RAB40A-201ENST00000304236 TMEM119Q4V9L6 283 aa15.77■□□□□ 0.12
RAB40A-201ENST00000304236 ADGRF4Q8IZF3 695 aa15.77■□□□□ 0.12
RAB40A-201ENST00000304236 EIF3CQ99613 913 aaKnown RBP15.77■□□□□ 0.12
RAB40A-201ENST00000304236 EHD4Q9H223 541 aa15.77■□□□□ 0.12
RAB40A-201ENST00000304236 RAB21Q9UL25 225 aa15.77■□□□□ 0.12
RAB40A-201ENST00000304236 MYO6Q9UM54 1294 aa15.77■□□□□ 0.12
RAB40A-201ENST00000304236 ZNF646O15015 1829 aaPredicted RBP15.77■□□□□ 0.11
RAB40A-201ENST00000304236 CCDC85CA6NKD9 419 aa15.76■□□□□ 0.11
RAB40A-201ENST00000304236 KRT86O43790 486 aa15.76■□□□□ 0.11
RAB40A-201ENST00000304236 ERLIN1O75477 346 aa15.76■□□□□ 0.11
RAB40A-201ENST00000304236 SEC31AO94979 1220 aaKnown RBP15.76■□□□□ 0.11
RAB40A-201ENST00000304236 MCM6Q14566 821 aa15.76■□□□□ 0.11
RAB40A-201ENST00000304236 CERS5Q8N5B7 392 aa15.76■□□□□ 0.11
RAB40A-201ENST00000304236 MTMR14Q8NCE2 650 aa15.76■□□□□ 0.11
RAB40A-201ENST00000304236 SNX29Q8TEQ0 813 aa15.76■□□□□ 0.11
RAB40A-201ENST00000304236 PCMTD1Q96MG8 357 aaPredicted RBP15.76■□□□□ 0.11
RAB40A-201ENST00000304236 MCOLN1Q9GZU1 580 aa15.76■□□□□ 0.11
RAB40A-201ENST00000304236 EPC1Q9H2F5 836 aa15.76■□□□□ 0.11
RAB40A-201ENST00000304236 SEMA6BQ9H3T3 888 aa15.76■□□□□ 0.11
RAB40A-201ENST00000304236 DDX4Q9NQI0 724 aaKnown RBP15.76■□□□□ 0.11
RAB40A-201ENST00000304236 PUF60Q9UHX1 559 aaKnown RBP15.76■□□□□ 0.11
RAB40A-201ENST00000304236 GREB1LQ9C091 1923 aaPredicted RBP15.76■□□□□ 0.11
RAB40A-201ENST00000304236 ZBTB5O15062 677 aa15.76■□□□□ 0.11
RAB40A-201ENST00000304236 SLC37A4O43826 429 aa15.76■□□□□ 0.11
RAB40A-201ENST00000304236 TDP2O95551 362 aa15.76■□□□□ 0.11
RAB40A-201ENST00000304236 SHMT1P34896 483 aa15.76■□□□□ 0.11
RAB40A-201ENST00000304236 TNNI2P48788 182 aa15.76■□□□□ 0.11
RAB40A-201ENST00000304236 AMPD2Q01433 879 aa15.76■□□□□ 0.11
RAB40A-201ENST00000304236 DGKZQ13574 1117 aa15.76■□□□□ 0.11
RAB40A-201ENST00000304236 MIIPQ5JXC2 388 aa15.76■□□□□ 0.11
RAB40A-201ENST00000304236 ARMC9Q7Z3E5 817 aa15.76■□□□□ 0.11
RAB40A-201ENST00000304236 KIAA1328Q86T90 577 aa15.76■□□□□ 0.11
RAB40A-201ENST00000304236 TEKT1Q969V4 418 aa15.76■□□□□ 0.11
RAB40A-201ENST00000304236 MTMR8Q96EF0 704 aa15.76■□□□□ 0.11
RAB40A-201ENST00000304236 TSG101Q99816 390 aa15.76■□□□□ 0.11
RAB40A-201ENST00000304236 UBXN6Q9BZV1 441 aa15.76■□□□□ 0.11
RAB40A-201ENST00000304236 GBP3Q9H0R5 595 aa15.76■□□□□ 0.11
RAB40A-201ENST00000304236 SLC39A2Q9NP94 309 aa15.76■□□□□ 0.11
RAB40A-201ENST00000304236 GUCA1BQ9UMX6 200 aa15.76■□□□□ 0.11
RAB40A-201ENST00000304236 F8W031 263 aaPredicted RBP15.75■□□□□ 0.11
RAB40A-201ENST00000304236 EDIL3O43854 480 aa15.75■□□□□ 0.11
RAB40A-201ENST00000304236 HERVK_113P62684 666 aa15.75■□□□□ 0.11
RAB40A-201ENST00000304236 MAN2A1Q16706 1144 aa15.75■□□□□ 0.11
RAB40A-201ENST00000304236 VWA3BQ502W6 1294 aa15.75■□□□□ 0.11
RAB40A-201ENST00000304236 CCDC122Q5T0U0 273 aa15.75■□□□□ 0.11
RAB40A-201ENST00000304236 CCDC84Q86UT8 332 aaPredicted RBP15.75■□□□□ 0.11
RAB40A-201ENST00000304236 ANKZF1Q9H8Y5 726 aa15.75■□□□□ 0.11
RAB40A-201ENST00000304236 DDX25Q9UHL0 483 aaKnown RBP15.75■□□□□ 0.11
RAB40A-201ENST00000304236 MYH4Q9Y623 1939 aa15.75■□□□□ 0.11
RAB40A-201ENST00000304236 KDM3AQ9Y4C1 1321 aa15.75■□□□□ 0.11
RAB40A-201ENST00000304236 HNRNPH3P31942 346 aaKnown RBP15.75■□□□□ 0.11
RAB40A-201ENST00000304236 CCDC96Q2M329 555 aa15.75■□□□□ 0.11
RAB40A-201ENST00000304236 CDC42EP5Q6NZY7 148 aa15.75■□□□□ 0.11
RAB40A-201ENST00000304236 TRAPPC11Q7Z392 1133 aa15.75■□□□□ 0.11
RAB40A-201ENST00000304236 MSL3Q8N5Y2 521 aaKnown RBP15.75■□□□□ 0.11
RAB40A-201ENST00000304236 JAKMIP2Q96AA8 810 aa15.75■□□□□ 0.11
RAB40A-201ENST00000304236 MRIQ9BWK5 157 aa15.75■□□□□ 0.11
RAB40A-201ENST00000304236 TSGA10Q9BZW7 698 aa15.75■□□□□ 0.11
RAB40A-201ENST00000304236 NT5C3AQ9H0P0 336 aa15.75■□□□□ 0.11
RAB40A-201ENST00000304236 ZSWIM4Q9H7M6 989 aa15.75■□□□□ 0.11
RAB40A-201ENST00000304236 NHEJ1Q9H9Q4 299 aaPredicted RBP15.75■□□□□ 0.11
RAB40A-201ENST00000304236 BMP2KQ9NSY1 1161 aaPredicted RBP15.75■□□□□ 0.11
RAB40A-201ENST00000304236 AGPAT5Q9NUQ2 364 aa15.75■□□□□ 0.11
RAB40A-201ENST00000304236 MARCH6O60337 910 aa15.74■□□□□ 0.11
RAB40A-201ENST00000304236 ABL1P00519 1130 aa15.74■□□□□ 0.11
RAB40A-201ENST00000304236 LONRF2Q1L5Z9 754 aa15.74■□□□□ 0.11
RAB40A-201ENST00000304236 HYIQ5T013 277 aa15.74■□□□□ 0.11
RAB40A-201ENST00000304236 RPGRIP1Q96KN7 1286 aa15.74■□□□□ 0.11
RAB40A-201ENST00000304236 EDEM3Q9BZQ6 932 aa15.74■□□□□ 0.11
RAB40A-201ENST00000304236 PSTPIP2Q9H939 334 aa15.74■□□□□ 0.11
RAB40A-201ENST00000304236 CASP8AP2Q9UKL3 1982 aa15.74■□□□□ 0.11
RAB40A-201ENST00000304236 EHHADHQ08426 723 aa15.73■□□□□ 0.11
RAB40A-201ENST00000304236 PAPD7Q5XG87 772 aaKnown RBP15.73■□□□□ 0.11
RAB40A-201ENST00000304236 MCTP2Q6DN12 878 aa15.73■□□□□ 0.11
RAB40A-201ENST00000304236 DCAF4Q8WV16 495 aa15.73■□□□□ 0.11
RAB40A-201ENST00000304236 FUT8Q9BYC5 575 aa15.73■□□□□ 0.11
RAB40A-201ENST00000304236 DEFB129Q9H1M3 183 aa15.73■□□□□ 0.11
RAB40A-201ENST00000304236 DHX36Q9H2U1 1008 aaKnown RBP15.73■□□□□ 0.11
RAB40A-201ENST00000304236 NDST4Q9H3R1 872 aa15.73■□□□□ 0.11
RAB40A-201ENST00000304236 PPP2R3BQ9Y5P8 575 aa15.73■□□□□ 0.11
RAB40A-201ENST00000304236 POTEMA6NI47 508 aa15.73■□□□□ 0.11
RAB40A-201ENST00000304236 MPHOSPH10O00566 681 aaKnown RBP15.73■□□□□ 0.11
RAB40A-201ENST00000304236 SASH3O75995 380 aa15.73■□□□□ 0.11
RAB40A-201ENST00000304236 CKAP4Q07065 602 aaKnown RBP15.73■□□□□ 0.11
RAB40A-201ENST00000304236 PRKG1Q13976 671 aa15.73■□□□□ 0.11
RAB40A-201ENST00000304236 TTBK2Q6IQ55 1244 aa15.73■□□□□ 0.11
RAB40A-201ENST00000304236 APOBEC3HQ6NTF7 200 aaKnown RBP15.73■□□□□ 0.11
RAB40A-201ENST00000304236 DYMQ7RTS9 669 aa15.73■□□□□ 0.11
RAB40A-201ENST00000304236 DDX12PQ92771 950 aa15.73■□□□□ 0.11
RAB40A-201ENST00000304236 MKL1Q969V6 931 aa15.73■□□□□ 0.11
RAB40A-201ENST00000304236 PLAGL2Q9UPG8 496 aa15.73■□□□□ 0.11
RAB40A-201ENST00000304236 SAR1BQ9Y6B6 198 aa15.73■□□□□ 0.11
RAB40A-201ENST00000304236 ANO9A1A5B4 782 aa15.72■□□□□ 0.11
RAB40A-201ENST00000304236 SPDYE2BA6NHP3 402 aa15.72■□□□□ 0.11
RAB40A-201ENST00000304236 MAP2K7O14733 419 aa15.72■□□□□ 0.11
RAB40A-201ENST00000304236 PPP1R11O60927 126 aaPredicted RBP15.72■□□□□ 0.11
RAB40A-201ENST00000304236 SPDYE6P0CI01 402 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms