RNA–Protein interactions for RNA: ENST00000303657.9

RFX2-201, Transcript of regulatory factor X2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RFX2, Length 3,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX2-201ENST00000303657 SYF2O95926 243 aaKnown RBP11.76□□□□□ -0.53
RFX2-201ENST00000303657 ZNF543Q08ER8 600 aa11.76□□□□□ -0.53
RFX2-201ENST00000303657 CFAP58Q5T655 872 aa11.76□□□□□ -0.53
RFX2-201ENST00000303657 APOBEC3HQ6NTF7 200 aaKnown RBP11.76□□□□□ -0.53
RFX2-201ENST00000303657 MSANTD4Q8NCY6 345 aa11.76□□□□□ -0.53
RFX2-201ENST00000303657 PRMT6Q96LA8 375 aaPredicted RBP11.76□□□□□ -0.53
RFX2-201ENST00000303657 SWAP70Q9UH65 585 aa11.76□□□□□ -0.53
RFX2-201ENST00000303657 BAIAP2L1Q9UHR4 511 aa11.76□□□□□ -0.53
RFX2-201ENST00000303657 PDS5AQ29RF7 1337 aaKnown RBP11.76□□□□□ -0.53
RFX2-201ENST00000303657 PPP1R3GB7ZBB8 358 aa11.76□□□□□ -0.53
RFX2-201ENST00000303657 KRT86O43790 486 aa11.76□□□□□ -0.53
RFX2-201ENST00000303657 TTLL12Q14166 644 aaPredicted RBP11.76□□□□□ -0.53
RFX2-201ENST00000303657 NEDD9Q14511 834 aa11.76□□□□□ -0.53
RFX2-201ENST00000303657 GPATCH4Q5T3I0 446 aaKnown RBP11.76□□□□□ -0.53
RFX2-201ENST00000303657 ZMYND12Q9H0C1 365 aa11.76□□□□□ -0.53
RFX2-201ENST00000303657 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.76□□□□□ -0.53
RFX2-201ENST00000303657 HGSO14964 777 aaPredicted RBP11.76□□□□□ -0.53
RFX2-201ENST00000303657 PAFAH1B1P43034 410 aa11.76□□□□□ -0.53
RFX2-201ENST00000303657 SEC24CP53992 1094 aa11.76□□□□□ -0.53
RFX2-201ENST00000303657 USP14P54578 494 aa11.76□□□□□ -0.53
RFX2-201ENST00000303657 STK4Q13043 487 aa11.76□□□□□ -0.53
RFX2-201ENST00000303657 PTPROQ16827 1216 aa11.76□□□□□ -0.53
RFX2-201ENST00000303657 TSG101Q99816 390 aa11.76□□□□□ -0.53
RFX2-201ENST00000303657 ZBTB5O15062 677 aa11.75□□□□□ -0.53
RFX2-201ENST00000303657 KCTD19Q17RG1 926 aaPredicted RBP11.75□□□□□ -0.53
RFX2-201ENST00000303657 FBXO11Q86XK2 927 aa11.75□□□□□ -0.53
RFX2-201ENST00000303657 LARP4BQ92615 738 aaKnown RBP11.75□□□□□ -0.53
RFX2-201ENST00000303657 RAB21Q9UL25 225 aa11.75□□□□□ -0.53
RFX2-201ENST00000303657 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.75□□□□□ -0.53
RFX2-201ENST00000303657 LAMA4Q16363 1823 aa11.75□□□□□ -0.53
RFX2-201ENST00000303657 ESYT3A0FGR9 886 aa11.75□□□□□ -0.53
RFX2-201ENST00000303657 MYBL2P10244 700 aa11.75□□□□□ -0.53
RFX2-201ENST00000303657 SP4Q02446 784 aa11.75□□□□□ -0.53
RFX2-201ENST00000303657 PABPC4Q13310 644 aaKnown RBP eCLIP11.75□□□□□ -0.53
RFX2-201ENST00000303657 TNFRSF25Q93038 417 aa11.75□□□□□ -0.53
RFX2-201ENST00000303657 CCDC17Q96LX7 622 aa11.75□□□□□ -0.53
RFX2-201ENST00000303657 PANX2Q96RD6 677 aa11.75□□□□□ -0.53
RFX2-201ENST00000303657 KRT14P02533 472 aa11.75□□□□□ -0.53
RFX2-201ENST00000303657 SHMT1P34896 483 aa11.75□□□□□ -0.53
RFX2-201ENST00000303657 TUBB4BP68371 445 aa11.75□□□□□ -0.53
RFX2-201ENST00000303657 KIF5AQ12840 1032 aa11.75□□□□□ -0.53
RFX2-201ENST00000303657 SLC15A2Q16348 729 aa11.75□□□□□ -0.53
RFX2-201ENST00000303657 CC2D2BQ6DHV5 1058 aa11.75□□□□□ -0.53
RFX2-201ENST00000303657 CNNM4Q6P4Q7 775 aa11.75□□□□□ -0.53
RFX2-201ENST00000303657 TUBGCP2Q9BSJ2 902 aa11.75□□□□□ -0.53
RFX2-201ENST00000303657 NAA15Q9BXJ9 866 aaKnown RBP11.75□□□□□ -0.53
RFX2-201ENST00000303657 NWD2Q9ULI1 1742 aa11.74□□□□□ -0.53
RFX2-201ENST00000303657 E9PMD0 336 aa11.74□□□□□ -0.53
RFX2-201ENST00000303657 SARSP49591 514 aaKnown RBP11.74□□□□□ -0.53
RFX2-201ENST00000303657 TCP11X2Q5H9J9 407 aa11.74□□□□□ -0.53
RFX2-201ENST00000303657 PNMA8AQ86V59 439 aaPredicted RBP11.74□□□□□ -0.53
RFX2-201ENST00000303657 SUGP1Q8IWZ8 645 aaKnown RBP11.74□□□□□ -0.53
RFX2-201ENST00000303657 SMCR8Q8TEV9 937 aaPredicted RBP11.74□□□□□ -0.53
RFX2-201ENST00000303657 MTRQ99707 1265 aa11.74□□□□□ -0.53
RFX2-201ENST00000303657 NLRC4Q9NPP4 1024 aa11.74□□□□□ -0.53
RFX2-201ENST00000303657 DONSONQ9NYP3 566 aa11.74□□□□□ -0.53
RFX2-201ENST00000303657 PLCH1Q4KWH8 1693 aa11.74□□□□□ -0.53
RFX2-201ENST00000303657 AKR1B10O60218 316 aa11.74□□□□□ -0.53
RFX2-201ENST00000303657 GCKP35557 465 aa11.74□□□□□ -0.53
RFX2-201ENST00000303657 PMS1P54277 932 aaKnown RBP11.74□□□□□ -0.53
RFX2-201ENST00000303657 APBA1Q02410 837 aa11.74□□□□□ -0.53
RFX2-201ENST00000303657 BIRC2Q13490 618 aa11.74□□□□□ -0.53
RFX2-201ENST00000303657 PDXDC2PQ6P474 469 aa11.74□□□□□ -0.53
RFX2-201ENST00000303657 GPBP1Q86WP2 473 aa11.74□□□□□ -0.53
RFX2-201ENST00000303657 CNOT6LQ96LI5 555 aaKnown RBP11.74□□□□□ -0.53
RFX2-201ENST00000303657 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.74□□□□□ -0.53
RFX2-201ENST00000303657 RWDD2AQ9UIY3 292 aa11.74□□□□□ -0.53
RFX2-201ENST00000303657 BICDL2A1A5D9 508 aa11.74□□□□□ -0.53
RFX2-201ENST00000303657 H7C1D1 291 aa11.74□□□□□ -0.53
RFX2-201ENST00000303657 CALRP27797 417 aaKnown RBP11.74□□□□□ -0.53
RFX2-201ENST00000303657 PSEN1P49768 467 aa11.74□□□□□ -0.53
RFX2-201ENST00000303657 NNTQ13423 1086 aa11.74□□□□□ -0.53
RFX2-201ENST00000303657 TUBB2AQ13885 445 aa11.74□□□□□ -0.53
RFX2-201ENST00000303657 ARL8AQ96BM9 186 aa11.74□□□□□ -0.53
RFX2-201ENST00000303657 TUBB2BQ9BVA1 445 aa11.74□□□□□ -0.53
RFX2-201ENST00000303657 PAPPAQ13219 1627 aa11.74□□□□□ -0.53
RFX2-201ENST00000303657 NDUFA10O95299 355 aa11.73□□□□□ -0.53
RFX2-201ENST00000303657 BMP3P12645 472 aa11.73□□□□□ -0.53
RFX2-201ENST00000303657 PAX7P23759 505 aa11.73□□□□□ -0.53
RFX2-201ENST00000303657 SARNPP82979 210 aaKnown RBP11.73□□□□□ -0.53
RFX2-201ENST00000303657 NR1I3Q14994 352 aa11.73□□□□□ -0.53
RFX2-201ENST00000303657 TBC1D10BQ4KMP7 808 aaPredicted RBP11.73□□□□□ -0.53
RFX2-201ENST00000303657 TPH2Q8IWU9 490 aa11.73□□□□□ -0.53
RFX2-201ENST00000303657 PRPF38AQ8NAV1 312 aaKnown RBP11.73□□□□□ -0.53
RFX2-201ENST00000303657 NUDT12Q9BQG2 462 aa11.73□□□□□ -0.53
RFX2-201ENST00000303657 AMNQ9BXJ7 453 aa11.73□□□□□ -0.53
RFX2-201ENST00000303657 DHX36Q9H2U1 1008 aaKnown RBP11.73□□□□□ -0.53
RFX2-201ENST00000303657 POTEB3A0JP26 581 aa11.73□□□□□ -0.53
RFX2-201ENST00000303657 POTECB2RU33 542 aa11.73□□□□□ -0.53
RFX2-201ENST00000303657 EIF3HO15372 352 aaKnown RBP eCLIP11.73□□□□□ -0.53
RFX2-201ENST00000303657 GYPCP04921 128 aa11.73□□□□□ -0.53
RFX2-201ENST00000303657 ELF1P32519 619 aa11.73□□□□□ -0.53
RFX2-201ENST00000303657 ECE1P42892 770 aa11.73□□□□□ -0.53
RFX2-201ENST00000303657 ERVK-24P63145 666 aa11.73□□□□□ -0.53
RFX2-201ENST00000303657 STRIP1Q5VSL9 837 aa11.73□□□□□ -0.53
RFX2-201ENST00000303657 C8orf74Q6P047 294 aa11.73□□□□□ -0.53
RFX2-201ENST00000303657 POTEBQ6S5H4 581 aa11.73□□□□□ -0.53
RFX2-201ENST00000303657 DDX12PQ92771 950 aa11.73□□□□□ -0.53
RFX2-201ENST00000303657 MED15Q96RN5 788 aa11.73□□□□□ -0.53
RFX2-201ENST00000303657 TRIM9Q9C026 710 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms