RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 WDR11Q9BZH6 1224 aa21.6■■□□□ 1.05
HOXC4-201ENST00000303406 SLC38A10Q9HBR0 1119 aa21.6■■□□□ 1.05
HOXC4-201ENST00000303406 ABHD10Q9NUJ1 306 aa21.6■■□□□ 1.05
HOXC4-201ENST00000303406 SMCHD1A6NHR9 2005 aa21.59■■□□□ 1.05
HOXC4-201ENST00000303406 ZNF541Q9H0D2 1346 aa21.59■■□□□ 1.05
HOXC4-201ENST00000303406 POTEFA5A3E0 1075 aa21.59■■□□□ 1.05
HOXC4-201ENST00000303406 MEIS1O00470 390 aa21.59■■□□□ 1.05
HOXC4-201ENST00000303406 EYA4O95677 639 aa21.59■■□□□ 1.05
HOXC4-201ENST00000303406 POTEIP0CG38 1075 aa21.59■■□□□ 1.05
HOXC4-201ENST00000303406 MTIF2P46199 727 aaKnown RBP21.59■■□□□ 1.05
HOXC4-201ENST00000303406 ZCWPW2Q504Y3 356 aa21.59■■□□□ 1.05
HOXC4-201ENST00000303406 POTEGQ6S5H5 508 aa21.59■■□□□ 1.05
HOXC4-201ENST00000303406 POTEEQ6S8J3 1075 aa21.59■■□□□ 1.05
HOXC4-201ENST00000303406 OTOP1Q7RTM1 612 aa21.59■■□□□ 1.05
HOXC4-201ENST00000303406 CCDC84Q86UT8 332 aaPredicted RBP21.59■■□□□ 1.05
HOXC4-201ENST00000303406 ERGIC2Q96RQ1 377 aa21.59■■□□□ 1.05
HOXC4-201ENST00000303406 PPP1R9AQ9ULJ8 1098 aa21.59■■□□□ 1.05
HOXC4-201ENST00000303406 FRMPD4Q14CM0 1322 aa21.59■■□□□ 1.05
HOXC4-201ENST00000303406 SSBP05455 408 aaKnown RBP eCLIP21.58■■□□□ 1.04
HOXC4-201ENST00000303406 PRKCSHP14314 528 aaPredicted RBP21.58■■□□□ 1.04
HOXC4-201ENST00000303406 NBPF12Q5TAG4 269 aaPredicted RBP21.58■■□□□ 1.04
HOXC4-201ENST00000303406 CYP2W1Q8TAV3 490 aa21.58■■□□□ 1.04
HOXC4-201ENST00000303406 CLEC4DQ8WXI8 215 aa21.58■■□□□ 1.04
HOXC4-201ENST00000303406 C12orf42Q96LP6 360 aa21.58■■□□□ 1.04
HOXC4-201ENST00000303406 CEP63Q96MT8 703 aa21.58■■□□□ 1.04
HOXC4-201ENST00000303406 HSD17B14Q9BPX1 270 aa21.58■■□□□ 1.04
HOXC4-201ENST00000303406 EIF2AK1Q9BQI3 630 aaKnown RBP21.58■■□□□ 1.04
HOXC4-201ENST00000303406 CAPN11Q9UMQ6 739 aa21.58■■□□□ 1.04
HOXC4-201ENST00000303406 CCDC175P0C221 793 aa21.57■■□□□ 1.04
HOXC4-201ENST00000303406 ARSHQ5FYA8 562 aa21.57■■□□□ 1.04
HOXC4-201ENST00000303406 MIIPQ5JXC2 388 aa21.57■■□□□ 1.04
HOXC4-201ENST00000303406 LRCH2Q5VUJ6 765 aa21.57■■□□□ 1.04
HOXC4-201ENST00000303406 B3GNT9Q6UX72 402 aa21.57■■□□□ 1.04
HOXC4-201ENST00000303406 LRRC55Q6ZSA7 311 aa21.57■■□□□ 1.04
HOXC4-201ENST00000303406 CREBRFQ8IUR6 639 aa21.57■■□□□ 1.04
HOXC4-201ENST00000303406 ZC3H3Q8IXZ2 948 aaKnown RBP21.57■■□□□ 1.04
HOXC4-201ENST00000303406 AGBL1Q96MI9 1066 aa21.57■■□□□ 1.04
HOXC4-201ENST00000303406 RIT2Q99578 217 aa21.57■■□□□ 1.04
HOXC4-201ENST00000303406 NOC4LQ9BVI4 516 aaKnown RBP21.57■■□□□ 1.04
HOXC4-201ENST00000303406 EMILIN3Q9NT22 766 aa21.57■■□□□ 1.04
HOXC4-201ENST00000303406 ASTN2O75129 1339 aaPredicted RBP21.57■■□□□ 1.04
HOXC4-201ENST00000303406 PARP14Q460N5 1801 aa21.57■■□□□ 1.04
HOXC4-201ENST00000303406 GNA14O95837 355 aa21.56■■□□□ 1.04
HOXC4-201ENST00000303406 KRT18P05783 430 aaKnown RBP21.56■■□□□ 1.04
HOXC4-201ENST00000303406 VCAM1P19320 739 aa21.56■■□□□ 1.04
HOXC4-201ENST00000303406 GIT2Q14161 759 aa21.56■■□□□ 1.04
HOXC4-201ENST00000303406 MAN2A1Q16706 1144 aa21.56■■□□□ 1.04
HOXC4-201ENST00000303406 FKBP15Q5T1M5 1219 aa21.56■■□□□ 1.04
HOXC4-201ENST00000303406 TRIM65Q6PJ69 517 aa21.56■■□□□ 1.04
HOXC4-201ENST00000303406 CYP26C1Q6V0L0 522 aa21.56■■□□□ 1.04
HOXC4-201ENST00000303406 NEK9Q8TD19 979 aa21.56■■□□□ 1.04
HOXC4-201ENST00000303406 CPLX3Q8WVH0 158 aa21.56■■□□□ 1.04
HOXC4-201ENST00000303406 ZNF592Q92610 1267 aa21.56■■□□□ 1.04
HOXC4-201ENST00000303406 MXRA8Q9BRK3 442 aa21.56■■□□□ 1.04
HOXC4-201ENST00000303406 MAF1Q9H063 256 aa21.56■■□□□ 1.04
HOXC4-201ENST00000303406 A0A1W2PQJ5 194 aa21.55■■□□□ 1.04
HOXC4-201ENST00000303406 B4DLN1 442 aa21.55■■□□□ 1.04
HOXC4-201ENST00000303406 EML1O00423 815 aa21.55■■□□□ 1.04
HOXC4-201ENST00000303406 ZBED4O75132 1171 aa21.55■■□□□ 1.04
HOXC4-201ENST00000303406 KRT9P35527 623 aa21.55■■□□□ 1.04
HOXC4-201ENST00000303406 FKBP3Q00688 224 aaKnown RBP21.55■■□□□ 1.04
HOXC4-201ENST00000303406 TBC1D8BQ0IIM8 1120 aa21.55■■□□□ 1.04
HOXC4-201ENST00000303406 HERC4Q5GLZ8 1057 aaPredicted RBP21.55■■□□□ 1.04
HOXC4-201ENST00000303406 TOGARAM2Q6ZUX3 1019 aa21.55■■□□□ 1.04
HOXC4-201ENST00000303406 GPC2Q8N158 579 aa21.55■■□□□ 1.04
HOXC4-201ENST00000303406 OR8K1Q8NGG5 319 aa21.55■■□□□ 1.04
HOXC4-201ENST00000303406 DNAJC7Q99615 494 aa21.55■■□□□ 1.04
HOXC4-201ENST00000303406 TTYH3Q9C0H2 523 aa21.55■■□□□ 1.04
HOXC4-201ENST00000303406 L2HGDHQ9H9P8 463 aa21.55■■□□□ 1.04
HOXC4-201ENST00000303406 GPRC5DQ9NZD1 345 aa21.55■■□□□ 1.04
HOXC4-201ENST00000303406 ADGRG1Q9Y653 693 aa21.55■■□□□ 1.04
HOXC4-201ENST00000303406 LOXHD1Q8IVV2 1947 aa21.55■■□□□ 1.04
HOXC4-201ENST00000303406 GAS7O60861 476 aa21.55■■□□□ 1.04
HOXC4-201ENST00000303406 MARSP56192 900 aaKnown RBP21.55■■□□□ 1.04
HOXC4-201ENST00000303406 BACE1P56817 501 aa21.55■■□□□ 1.04
HOXC4-201ENST00000303406 EPHA7Q15375 998 aa21.55■■□□□ 1.04
HOXC4-201ENST00000303406 VWA3BQ502W6 1294 aa21.55■■□□□ 1.04
HOXC4-201ENST00000303406 RAD9BQ6WBX8 426 aa21.55■■□□□ 1.04
HOXC4-201ENST00000303406 TEKT3Q9BXF9 490 aa21.55■■□□□ 1.04
HOXC4-201ENST00000303406 LUC7L2Q9Y383 392 aaKnown RBP21.55■■□□□ 1.04
HOXC4-201ENST00000303406 SOWAHDA6NJG2 315 aa21.54■■□□□ 1.04
HOXC4-201ENST00000303406 GAP43P17677 238 aa21.54■■□□□ 1.04
HOXC4-201ENST00000303406 MTMR2Q13614 643 aa21.54■■□□□ 1.04
HOXC4-201ENST00000303406 EDRF1Q3B7T1 1238 aa21.54■■□□□ 1.04
HOXC4-201ENST00000303406 NOL9Q5SY16 702 aaKnown RBP21.54■■□□□ 1.04
HOXC4-201ENST00000303406 SYT10Q6XYQ8 523 aa21.54■■□□□ 1.04
HOXC4-201ENST00000303406 ZNF280CQ8ND82 737 aa21.54■■□□□ 1.04
HOXC4-201ENST00000303406 NLGN2Q8NFZ4 835 aa21.54■■□□□ 1.04
HOXC4-201ENST00000303406 ZNF577Q9BSK1 485 aa21.54■■□□□ 1.04
HOXC4-201ENST00000303406 TANGO6Q9C0B7 1094 aa21.54■■□□□ 1.04
HOXC4-201ENST00000303406 PICK1Q9NRD5 415 aa21.54■■□□□ 1.04
HOXC4-201ENST00000303406 KCND2Q9NZV8 630 aa21.54■■□□□ 1.04
HOXC4-201ENST00000303406 SCAF8Q9UPN6 1271 aaKnown RBP21.54■■□□□ 1.04
HOXC4-201ENST00000303406 TTC26A0AVF1 554 aa21.53■■□□□ 1.04
HOXC4-201ENST00000303406 C19orf81C9J6K1 198 aa21.53■■□□□ 1.04
HOXC4-201ENST00000303406 FLOT1O75955 427 aa21.53■■□□□ 1.04
HOXC4-201ENST00000303406 LMNB1P20700 586 aa21.53■■□□□ 1.04
HOXC4-201ENST00000303406 OAZ1P54368 228 aa21.53■■□□□ 1.04
HOXC4-201ENST00000303406 PSMC6P62333 389 aa21.53■■□□□ 1.04
HOXC4-201ENST00000303406 PABPC4Q13310 644 aaKnown RBP eCLIP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms