RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 RMDN3Q96TC7 470 aa16.17■□□□□ 0.18
SHCBP1-201ENST00000303383 SRRTQ9BXP5 876 aaKnown RBP16.17■□□□□ 0.18
SHCBP1-201ENST00000303383 IPO5O00410 1097 aaKnown RBP16.16■□□□□ 0.18
SHCBP1-201ENST00000303383 CCNE1P24864 410 aa16.16■□□□□ 0.18
SHCBP1-201ENST00000303383 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.16■□□□□ 0.18
SHCBP1-201ENST00000303383 KIAA1524Q8TCG1 905 aa16.16■□□□□ 0.18
SHCBP1-201ENST00000303383 CLEC11AQ9Y240 323 aa16.16■□□□□ 0.18
SHCBP1-201ENST00000303383 TPM1P09493 284 aa16.16■□□□□ 0.18
SHCBP1-201ENST00000303383 PSMD2Q13200 908 aa16.16■□□□□ 0.18
SHCBP1-201ENST00000303383 CDKAL1Q5VV42 579 aa16.16■□□□□ 0.18
SHCBP1-201ENST00000303383 SPECC1LQ69YQ0 1117 aa16.16■□□□□ 0.18
SHCBP1-201ENST00000303383 CATSPERGQ6ZRH7 1159 aa16.16■□□□□ 0.18
SHCBP1-201ENST00000303383 ELP3Q9H9T3 547 aa16.16■□□□□ 0.18
SHCBP1-201ENST00000303383 SAMM50Q9Y512 469 aa16.16■□□□□ 0.18
SHCBP1-201ENST00000303383 ARP10275 920 aa16.15■□□□□ 0.18
SHCBP1-201ENST00000303383 SPIRE1Q08AE8 756 aa16.15■□□□□ 0.18
SHCBP1-201ENST00000303383 HERC4Q5GLZ8 1057 aaPredicted RBP16.15■□□□□ 0.18
SHCBP1-201ENST00000303383 PPFIBP1Q86W92 1011 aa16.15■□□□□ 0.18
SHCBP1-201ENST00000303383 FAM114A1Q8IWE2 563 aa16.15■□□□□ 0.18
SHCBP1-201ENST00000303383 NOC3LQ8WTT2 800 aaKnown RBP16.15■□□□□ 0.18
SHCBP1-201ENST00000303383 TAAR1Q96RJ0 339 aa16.15■□□□□ 0.18
SHCBP1-201ENST00000303383 TSG101Q99816 390 aa16.15■□□□□ 0.18
SHCBP1-201ENST00000303383 VPS16Q9H269 839 aa16.15■□□□□ 0.18
SHCBP1-201ENST00000303383 COL20A1Q9P218 1284 aa16.15■□□□□ 0.18
SHCBP1-201ENST00000303383 VAV3Q9UKW4 847 aa16.15■□□□□ 0.18
SHCBP1-201ENST00000303383 SNCAIPQ9Y6H5 919 aa16.15■□□□□ 0.18
SHCBP1-201ENST00000303383 SLC5A5Q92911 643 aa16.15■□□□□ 0.18
SHCBP1-201ENST00000303383 OTUD5Q96G74 571 aa16.15■□□□□ 0.18
SHCBP1-201ENST00000303383 WNK4Q96J92 1243 aa16.15■□□□□ 0.18
SHCBP1-201ENST00000303383 TEX13BQ9BXU2 312 aa16.15■□□□□ 0.18
SHCBP1-201ENST00000303383 RGL1Q9NZL6 768 aa16.15■□□□□ 0.18
SHCBP1-201ENST00000303383 BRD2P25440 801 aaKnown RBP16.15■□□□□ 0.18
SHCBP1-201ENST00000303383 OAZ1P54368 228 aa16.15■□□□□ 0.18
SHCBP1-201ENST00000303383 BAATQ14032 418 aaPredicted RBP16.15■□□□□ 0.18
SHCBP1-201ENST00000303383 CTTNQ14247 550 aaKnown RBP16.15■□□□□ 0.18
SHCBP1-201ENST00000303383 FAM26FQ5R3K3 315 aa16.15■□□□□ 0.18
SHCBP1-201ENST00000303383 SLC30A10Q6XR72 485 aa16.15■□□□□ 0.18
SHCBP1-201ENST00000303383 POLR3CQ9BUI4 534 aaPredicted RBP16.15■□□□□ 0.18
SHCBP1-201ENST00000303383 TAB2Q9NYJ8 693 aa16.15■□□□□ 0.18
SHCBP1-201ENST00000303383 SSC5DA1L4H1 1573 aa16.15■□□□□ 0.18
SHCBP1-201ENST00000303383 A0A1B0GTH6 734 aa16.14■□□□□ 0.17
SHCBP1-201ENST00000303383 KIF20AO95235 890 aa16.14■□□□□ 0.17
SHCBP1-201ENST00000303383 CACNB1Q02641 598 aaPredicted RBP16.14■□□□□ 0.17
SHCBP1-201ENST00000303383 COASYQ13057 564 aa16.14■□□□□ 0.17
SHCBP1-201ENST00000303383 KRT31Q15323 416 aa16.14■□□□□ 0.17
SHCBP1-201ENST00000303383 TCP11X2Q5H9J9 407 aa16.14■□□□□ 0.17
SHCBP1-201ENST00000303383 OTOP1Q7RTM1 612 aa16.14■□□□□ 0.17
SHCBP1-201ENST00000303383 TBC1D7Q9P0N9 293 aa16.14■□□□□ 0.17
SHCBP1-201ENST00000303383 TESPA1A2RU30 521 aaPredicted RBP16.14■□□□□ 0.17
SHCBP1-201ENST00000303383 IQCA1LA6NCM1 817 aa16.14■□□□□ 0.17
SHCBP1-201ENST00000303383 PSMD10O75832 226 aa16.14■□□□□ 0.17
SHCBP1-201ENST00000303383 FGFR1OPO95684 399 aaKnown RBP16.14■□□□□ 0.17
SHCBP1-201ENST00000303383 HOXA7P31268 230 aaPredicted RBP16.14■□□□□ 0.17
SHCBP1-201ENST00000303383 MTMR1Q13613 665 aa16.14■□□□□ 0.17
SHCBP1-201ENST00000303383 ANKRD13AQ8IZ07 590 aa16.14■□□□□ 0.17
SHCBP1-201ENST00000303383 CDCA5Q96FF9 252 aa16.14■□□□□ 0.17
SHCBP1-201ENST00000303383 BHMT2Q9H2M3 363 aa16.14■□□□□ 0.17
SHCBP1-201ENST00000303383 THAP9Q9H5L6 903 aa16.14■□□□□ 0.17
SHCBP1-201ENST00000303383 EML1O00423 815 aa16.14■□□□□ 0.17
SHCBP1-201ENST00000303383 TBCAO75347 108 aaKnown RBP16.14■□□□□ 0.17
SHCBP1-201ENST00000303383 IRX3P78415 501 aaPredicted RBP16.14■□□□□ 0.17
SHCBP1-201ENST00000303383 PCNX4Q63HM2 1172 aa16.14■□□□□ 0.17
SHCBP1-201ENST00000303383 ZC3H15Q8WU90 426 aaKnown RBP16.14■□□□□ 0.17
SHCBP1-201ENST00000303383 DYDC2Q96IM9 177 aa16.14■□□□□ 0.17
SHCBP1-201ENST00000303383 TUFT1Q9NNX1 390 aa16.14■□□□□ 0.17
SHCBP1-201ENST00000303383 KCNH7Q9NS40 1196 aa16.14■□□□□ 0.17
SHCBP1-201ENST00000303383 GRIN3BO60391 1043 aa16.13■□□□□ 0.17
SHCBP1-201ENST00000303383 MTIF2P46199 727 aaKnown RBP16.13■□□□□ 0.17
SHCBP1-201ENST00000303383 NR1I3Q14994 352 aa16.13■□□□□ 0.17
SHCBP1-201ENST00000303383 MIER3Q7Z3K6 550 aa16.13■□□□□ 0.17
SHCBP1-201ENST00000303383 MYOCDQ8IZQ8 938 aa16.13■□□□□ 0.17
SHCBP1-201ENST00000303383 KIAA0895Q8NCT3 520 aa16.13■□□□□ 0.17
SHCBP1-201ENST00000303383 CCDC43Q96MW1 224 aaKnown RBP16.13■□□□□ 0.17
SHCBP1-201ENST00000303383 ACAD9Q9H845 621 aa16.13■□□□□ 0.17
SHCBP1-201ENST00000303383 RIPK3Q9Y572 518 aa16.13■□□□□ 0.17
SHCBP1-201ENST00000303383 SPATA31C1P0DKV0 1188 aa16.13■□□□□ 0.17
SHCBP1-201ENST00000303383 CYP11B2P19099 503 aa16.13■□□□□ 0.17
SHCBP1-201ENST00000303383 COPB1P53618 953 aaKnown RBP16.13■□□□□ 0.17
SHCBP1-201ENST00000303383 PMS1P54277 932 aaKnown RBP16.13■□□□□ 0.17
SHCBP1-201ENST00000303383 PPP2R5CQ13362 524 aa16.13■□□□□ 0.17
SHCBP1-201ENST00000303383 LRRC41Q15345 812 aa16.13■□□□□ 0.17
SHCBP1-201ENST00000303383 IL31RAQ8NI17 732 aa16.13■□□□□ 0.17
SHCBP1-201ENST00000303383 EEF2KMTQ96G04 330 aa16.13■□□□□ 0.17
SHCBP1-201ENST00000303383 RIT2Q99578 217 aa16.13■□□□□ 0.17
SHCBP1-201ENST00000303383 ADD3Q9UEY8 706 aaKnown RBP16.13■□□□□ 0.17
SHCBP1-201ENST00000303383 NPHP3-ACAD11A0A0J9YXS1 232 aa16.13■□□□□ 0.17
SHCBP1-201ENST00000303383 GLTPD2A6NH11 291 aa16.13■□□□□ 0.17
SHCBP1-201ENST00000303383 PSMC6P62333 389 aa16.13■□□□□ 0.17
SHCBP1-201ENST00000303383 TMEM132BQ14DG7 1078 aa16.13■□□□□ 0.17
SHCBP1-201ENST00000303383 TKFCQ3LXA3 575 aa16.13■□□□□ 0.17
SHCBP1-201ENST00000303383 ARMC9Q7Z3E5 817 aa16.13■□□□□ 0.17
SHCBP1-201ENST00000303383 GUF1Q8N442 669 aaKnown RBP16.13■□□□□ 0.17
SHCBP1-201ENST00000303383 CNKSR2Q8WXI2 1034 aa16.13■□□□□ 0.17
SHCBP1-201ENST00000303383 L3MBTL3Q96JM7 780 aaPredicted RBP16.13■□□□□ 0.17
SHCBP1-201ENST00000303383 INTS13Q9NVM9 706 aa16.13■□□□□ 0.17
SHCBP1-201ENST00000303383 LIMA1Q9UHB6 759 aaKnown RBP16.13■□□□□ 0.17
SHCBP1-201ENST00000303383 TEX33O43247 280 aa16.12■□□□□ 0.17
SHCBP1-201ENST00000303383 ITGB5P18084 799 aa16.12■□□□□ 0.17
SHCBP1-201ENST00000303383 EEF1GP26641 437 aaKnown RBP16.12■□□□□ 0.17
SHCBP1-201ENST00000303383 PGM5Q15124 567 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms