RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 NSUN7Q8NE18 718 aaKnown RBP8.25□□□□□ -1.09
SF3B3-201ENST00000302516 DACT3Q96B18 629 aaPredicted RBP8.25□□□□□ -1.09
SF3B3-201ENST00000302516 PALD1Q9ULE6 856 aa8.25□□□□□ -1.09
SF3B3-201ENST00000302516 SRPRBQ9Y5M8 271 aaKnown RBP8.25□□□□□ -1.09
SF3B3-201ENST00000302516 MADDQ8WXG6 1647 aa8.25□□□□□ -1.09
SF3B3-201ENST00000302516 H7C0C1 242 aa8.25□□□□□ -1.09
SF3B3-201ENST00000302516 PCCAP05165 728 aaPredicted RBP8.25□□□□□ -1.09
SF3B3-201ENST00000302516 KCNA4P22459 653 aa8.25□□□□□ -1.09
SF3B3-201ENST00000302516 ATP5OP48047 213 aa8.25□□□□□ -1.09
SF3B3-201ENST00000302516 POLGP54098 1239 aaPredicted RBP8.25□□□□□ -1.09
SF3B3-201ENST00000302516 IGBP1P78318 339 aa8.25□□□□□ -1.09
SF3B3-201ENST00000302516 KLHDC4Q8TBB5 520 aa8.25□□□□□ -1.09
SF3B3-201ENST00000302516 TAF5LO75529 589 aa8.25□□□□□ -1.09
SF3B3-201ENST00000302516 FGAP02671 866 aa8.25□□□□□ -1.09
SF3B3-201ENST00000302516 MMEP08473 750 aa8.25□□□□□ -1.09
SF3B3-201ENST00000302516 EIF6P56537 245 aaKnown RBP8.25□□□□□ -1.09
SF3B3-201ENST00000302516 MDM2Q00987 491 aaPredicted RBP8.25□□□□□ -1.09
SF3B3-201ENST00000302516 NBPF20Q3BBV1 942 aa8.25□□□□□ -1.09
SF3B3-201ENST00000302516 TTBK2Q6IQ55 1244 aa8.25□□□□□ -1.09
SF3B3-201ENST00000302516 MORC4Q8TE76 937 aa8.25□□□□□ -1.09
SF3B3-201ENST00000302516 MXD3Q9BW11 206 aa8.25□□□□□ -1.09
SF3B3-201ENST00000302516 TBX22Q9Y458 520 aa8.25□□□□□ -1.09
SF3B3-201ENST00000302516 SOWAHDA6NJG2 315 aa8.25□□□□□ -1.09
SF3B3-201ENST00000302516 MX2P20592 715 aa8.25□□□□□ -1.09
SF3B3-201ENST00000302516 DPP8Q6V1X1 898 aaPredicted RBP8.25□□□□□ -1.09
SF3B3-201ENST00000302516 WDR11Q9BZH6 1224 aa8.25□□□□□ -1.09
SF3B3-201ENST00000302516 ANKFY1Q9P2R3 1169 aa8.25□□□□□ -1.09
SF3B3-201ENST00000302516 PCDHA5Q9Y5H7 936 aa8.25□□□□□ -1.09
SF3B3-201ENST00000302516 KDM6BO15054 1643 aa8.24□□□□□ -1.09
SF3B3-201ENST00000302516 ABCA9Q8IUA7 1624 aa8.24□□□□□ -1.09
SF3B3-201ENST00000302516 ZC3H13Q5T200 1668 aaKnown RBP8.24□□□□□ -1.09
SF3B3-201ENST00000302516 CHGBP05060 677 aa8.24□□□□□ -1.09
SF3B3-201ENST00000302516 KCNJ6P48051 423 aa8.24□□□□□ -1.09
SF3B3-201ENST00000302516 ARHGAP10A1A4S6 786 aa8.24□□□□□ -1.09
SF3B3-201ENST00000302516 POC1B-GALNT4F8VUJ3 575 aa8.24□□□□□ -1.09
SF3B3-201ENST00000302516 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.24□□□□□ -1.095e-17■■■■■ 56.5
SF3B3-201ENST00000302516 APOA5Q6Q788 366 aa8.24□□□□□ -1.09
SF3B3-201ENST00000302516 LINC00301Q8NCQ3 95 aa8.24□□□□□ -1.09
SF3B3-201ENST00000302516 GNGT2O14610 69 aa8.24□□□□□ -1.09
SF3B3-201ENST00000302516 KRT37O76014 449 aa8.24□□□□□ -1.09
SF3B3-201ENST00000302516 CHEK2O96017 543 aa8.24□□□□□ -1.09
SF3B3-201ENST00000302516 AP2B1P63010 937 aa8.24□□□□□ -1.09
SF3B3-201ENST00000302516 TCIRG1Q13488 830 aa8.24□□□□□ -1.09
SF3B3-201ENST00000302516 ODR4Q5SWX8 454 aa8.24□□□□□ -1.09
SF3B3-201ENST00000302516 RAPH1Q70E73 1250 aa8.24□□□□□ -1.09
SF3B3-201ENST00000302516 FBXO11Q86XK2 927 aa8.24□□□□□ -1.09
SF3B3-201ENST00000302516 PIP4K2CQ8TBX8 421 aa8.24□□□□□ -1.09
SF3B3-201ENST00000302516 CCDC138Q96M89 665 aa8.24□□□□□ -1.09
SF3B3-201ENST00000302516 OSBPL5Q9H0X9 879 aaPredicted RBP8.24□□□□□ -1.09
SF3B3-201ENST00000302516 PLAAQ9Y263 795 aa8.24□□□□□ -1.09
SF3B3-201ENST00000302516 MBD5Q9P267 1494 aa8.24□□□□□ -1.09
SF3B3-201ENST00000302516 RIMBP2O15034 1052 aa8.24□□□□□ -1.09
SF3B3-201ENST00000302516 GGPS1O95749 300 aa8.24□□□□□ -1.09
SF3B3-201ENST00000302516 KRT1P04264 644 aa8.24□□□□□ -1.09
SF3B3-201ENST00000302516 PLS3P13797 630 aa8.24□□□□□ -1.09
SF3B3-201ENST00000302516 PLTPP55058 493 aa8.24□□□□□ -1.09
SF3B3-201ENST00000302516 DCAF15Q66K64 600 aa8.24□□□□□ -1.09
SF3B3-201ENST00000302516 TMC4Q7Z404 712 aa8.24□□□□□ -1.09
SF3B3-201ENST00000302516 ZC3H18Q86VM9 953 aaKnown RBP8.24□□□□□ -1.09
SF3B3-201ENST00000302516 APLFQ8IW19 511 aaPredicted RBP8.24□□□□□ -1.09
SF3B3-201ENST00000302516 MAPKAPK5Q8IW41 473 aa8.24□□□□□ -1.09
SF3B3-201ENST00000302516 PDIK1LQ8N165 341 aa8.24□□□□□ -1.09
SF3B3-201ENST00000302516 FRMD3A2A2Y4 597 aa8.24□□□□□ -1.09
SF3B3-201ENST00000302516 TADA3O75528 432 aa8.24□□□□□ -1.09
SF3B3-201ENST00000302516 TMED1Q13445 227 aa8.24□□□□□ -1.09
SF3B3-201ENST00000302516 MFSD14BQ5SR56 506 aa8.24□□□□□ -1.09
SF3B3-201ENST00000302516 PDXDC1Q6P996 788 aa8.24□□□□□ -1.09
SF3B3-201ENST00000302516 MAML1Q92585 1016 aa8.24□□□□□ -1.09
SF3B3-201ENST00000302516 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.24□□□□□ -1.09
SF3B3-201ENST00000302516 TRIM55Q9BYV6 548 aa8.24□□□□□ -1.09
SF3B3-201ENST00000302516 HNRNPDLO14979 420 aaKnown RBP8.24□□□□□ -1.09
SF3B3-201ENST00000302516 IFNAR2P48551 515 aa8.24□□□□□ -1.09
SF3B3-201ENST00000302516 PKP1Q13835 747 aa8.24□□□□□ -1.09
SF3B3-201ENST00000302516 XKR9Q5GH70 373 aa8.24□□□□□ -1.09
SF3B3-201ENST00000302516 RPS6KC1Q96S38 1066 aa8.24□□□□□ -1.09
SF3B3-201ENST00000302516 DONSONQ9NYP3 566 aa8.24□□□□□ -1.09
SF3B3-201ENST00000302516 SCHIP1Q9P0W5 487 aaPredicted RBP8.24□□□□□ -1.09
SF3B3-201ENST00000302516 CEP72Q9P209 647 aa8.24□□□□□ -1.09
SF3B3-201ENST00000302516 TMEM232C9JQI7 657 aa8.24□□□□□ -1.09
SF3B3-201ENST00000302516 TJP3O95049 919 aa8.24□□□□□ -1.09
SF3B3-201ENST00000302516 DLATP10515 647 aaKnown RBP8.24□□□□□ -1.09
SF3B3-201ENST00000302516 TAC1P20366 129 aa8.24□□□□□ -1.09
SF3B3-201ENST00000302516 FAM133BQ5BKY9 247 aaKnown RBP8.24□□□□□ -1.09
SF3B3-201ENST00000302516 FAM186BQ8IYM0 893 aa8.24□□□□□ -1.09
SF3B3-201ENST00000302516 MYO1CO00159 1063 aa8.23□□□□□ -1.09
SF3B3-201ENST00000302516 PRPF3O43395 683 aaKnown RBP8.23□□□□□ -1.09
SF3B3-201ENST00000302516 TTLL1O95922 423 aa8.23□□□□□ -1.09
SF3B3-201ENST00000302516 ESRRAP11474 423 aaPredicted RBP8.23□□□□□ -1.09
SF3B3-201ENST00000302516 KIF23Q02241 960 aaPredicted RBP8.23□□□□□ -1.09
SF3B3-201ENST00000302516 PPP2R5CQ13362 524 aa8.23□□□□□ -1.09
SF3B3-201ENST00000302516 KLHL38Q2WGJ6 581 aa8.23□□□□□ -1.09
SF3B3-201ENST00000302516 TTC19Q6DKK2 380 aaPredicted RBP8.23□□□□□ -1.09
SF3B3-201ENST00000302516 DNAJC24Q6P3W2 148 aa8.23□□□□□ -1.09
SF3B3-201ENST00000302516 KCTD6Q8NC69 237 aa8.23□□□□□ -1.09
SF3B3-201ENST00000302516 CDHR1Q96JP9 859 aa8.23□□□□□ -1.09
SF3B3-201ENST00000302516 NACC1Q96RE7 527 aa8.23□□□□□ -1.09
SF3B3-201ENST00000302516 MRGBPQ9NV56 204 aa8.23□□□□□ -1.09
SF3B3-201ENST00000302516 KIAA1024Q9UPX6 916 aa8.23□□□□□ -1.09
SF3B3-201ENST00000302516 CLTCL1P53675 1640 aa8.23□□□□□ -1.09
SF3B3-201ENST00000302516 PAMP19021 973 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms