RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 MDM2Q00987 491 aaPredicted RBP15.44■□□□□ 0.06
SDC2-201ENST00000302190 TTBK2Q6IQ55 1244 aa15.44■□□□□ 0.06
SDC2-201ENST00000302190 THAP9Q9H5L6 903 aa15.44■□□□□ 0.06
SDC2-201ENST00000302190 LIMA1Q9UHB6 759 aaKnown RBP15.44■□□□□ 0.06
SDC2-201ENST00000302190 SPEF2Q9C093 1822 aa15.44■□□□□ 0.06
SDC2-201ENST00000302190 PRPF6O94906 941 aaKnown RBP15.44■□□□□ 0.06
SDC2-201ENST00000302190 XRCC5P13010 732 aaKnown RBP15.44■□□□□ 0.06
SDC2-201ENST00000302190 COG1Q8WTW3 980 aa15.44■□□□□ 0.06
SDC2-201ENST00000302190 LRRIQ3A6PVS8 624 aaPredicted RBP15.43■□□□□ 0.06
SDC2-201ENST00000302190 CTNNA1P35221 906 aaKnown RBP15.43■□□□□ 0.06
SDC2-201ENST00000302190 VPS41P49754 854 aa15.43■□□□□ 0.06
SDC2-201ENST00000302190 FKBP3Q00688 224 aaKnown RBP15.43■□□□□ 0.06
SDC2-201ENST00000302190 PAK2Q13177 524 aa15.43■□□□□ 0.06
SDC2-201ENST00000302190 CAPN7Q9Y6W3 813 aa15.43■□□□□ 0.06
SDC2-201ENST00000302190 COL5A3P25940 1745 aaPredicted RBP15.43■□□□□ 0.06
SDC2-201ENST00000302190 KRIT1O00522 736 aa15.43■□□□□ 0.06
SDC2-201ENST00000302190 EPB41P11171 864 aaKnown RBP15.43■□□□□ 0.06
SDC2-201ENST00000302190 MKRN4PQ13434 485 aaPredicted RBP15.43■□□□□ 0.06
SDC2-201ENST00000302190 IFI16Q16666 785 aaKnown RBP15.43■□□□□ 0.06
SDC2-201ENST00000302190 RBM26Q5T8P6 1007 aaKnown RBP15.43■□□□□ 0.06
SDC2-201ENST00000302190 TICAM2Q86XR7 235 aa15.43■□□□□ 0.06
SDC2-201ENST00000302190 POTEB3A0JP26 581 aa15.43■□□□□ 0.06
SDC2-201ENST00000302190 POTECB2RU33 542 aa15.43■□□□□ 0.06
SDC2-201ENST00000302190 SORBS3O60504 671 aa15.43■□□□□ 0.06
SDC2-201ENST00000302190 USP14P54578 494 aa15.43■□□□□ 0.06
SDC2-201ENST00000302190 BEND6Q5SZJ8 279 aaPredicted RBP15.43■□□□□ 0.06
SDC2-201ENST00000302190 POTEBQ6S5H4 581 aa15.43■□□□□ 0.06
SDC2-201ENST00000302190 ANKZF1Q9H8Y5 726 aa15.43■□□□□ 0.06
SDC2-201ENST00000302190 POLRMTO00411 1230 aaKnown RBP15.42■□□□□ 0.06
SDC2-201ENST00000302190 PLSCR1O15162 318 aa15.42■□□□□ 0.06
SDC2-201ENST00000302190 PALMO75781 387 aa15.42■□□□□ 0.06
SDC2-201ENST00000302190 SARSP49591 514 aaKnown RBP15.42■□□□□ 0.06
SDC2-201ENST00000302190 APBA1Q02410 837 aa15.42■□□□□ 0.06
SDC2-201ENST00000302190 AKT1S1Q96B36 256 aa15.42■□□□□ 0.06
SDC2-201ENST00000302190 ZNF512BQ96KM6 892 aaPredicted RBP15.42■□□□□ 0.06
SDC2-201ENST00000302190 LZTS2Q9BRK4 669 aa15.42■□□□□ 0.06
SDC2-201ENST00000302190 BARHL2Q9NY43 387 aa15.42■□□□□ 0.06
SDC2-201ENST00000302190 SEMA3EO15041 775 aa15.42■□□□□ 0.06
SDC2-201ENST00000302190 PCP11498 1178 aaKnown RBP15.42■□□□□ 0.06
SDC2-201ENST00000302190 FOXR1Q6PIV2 292 aa15.42■□□□□ 0.06
SDC2-201ENST00000302190 MICALCLQ6ZW33 695 aa15.42■□□□□ 0.06
SDC2-201ENST00000302190 GIMAP7Q8NHV1 300 aa15.42■□□□□ 0.06
SDC2-201ENST00000302190 MXD3Q9BW11 206 aa15.42■□□□□ 0.06
SDC2-201ENST00000302190 DBNDD1Q9H9R9 158 aa15.42■□□□□ 0.06
SDC2-201ENST00000302190 GOLGA6L10A0A0M3HER8 536 aa15.41■□□□□ 0.06
SDC2-201ENST00000302190 EXOC3O60645 756 aa15.41■□□□□ 0.06
SDC2-201ENST00000302190 ADCY1Q08828 1119 aa15.41■□□□□ 0.06
SDC2-201ENST00000302190 CETN1Q12798 172 aa15.41■□□□□ 0.06
SDC2-201ENST00000302190 SLC15A2Q16348 729 aa15.41■□□□□ 0.06
SDC2-201ENST00000302190 C12orf60Q5U649 245 aa15.41■□□□□ 0.06
SDC2-201ENST00000302190 MGARPQ8TDB4 240 aa15.41■□□□□ 0.06
SDC2-201ENST00000302190 KIFC2Q96AC6 838 aa15.41■□□□□ 0.06
SDC2-201ENST00000302190 RPGRIP1Q96KN7 1286 aa15.41■□□□□ 0.06
SDC2-201ENST00000302190 CAMKK2Q96RR4 588 aa15.41■□□□□ 0.06
SDC2-201ENST00000302190 TAF1LQ8IZX4 1826 aa15.41■□□□□ 0.06
SDC2-201ENST00000302190 TNFAIP3P21580 790 aa15.41■□□□□ 0.06
SDC2-201ENST00000302190 TM4SF1P30408 202 aa15.41■□□□□ 0.06
SDC2-201ENST00000302190 TBX2Q13207 712 aaPredicted RBP15.41■□□□□ 0.06
SDC2-201ENST00000302190 CCDC121Q6ZUS5 278 aa15.41■□□□□ 0.06
SDC2-201ENST00000302190 PIGOQ8TEQ8 1089 aa15.41■□□□□ 0.06
SDC2-201ENST00000302190 CTTNBP2NLQ9P2B4 639 aa15.41■□□□□ 0.06
SDC2-201ENST00000302190 MKRN1Q9UHC7 482 aaKnown RBP15.41■□□□□ 0.06
SDC2-201ENST00000302190 KRT14P02533 472 aa15.41■□□□□ 0.06
SDC2-201ENST00000302190 SLURP2P0DP57 97 aa15.41■□□□□ 0.06
SDC2-201ENST00000302190 CAPN11Q9UMQ6 739 aa15.41■□□□□ 0.06
SDC2-201ENST00000302190 COL4A3BPQ9Y5P4 624 aa15.41■□□□□ 0.06
SDC2-201ENST00000302190 MYO5AQ9Y4I1 1855 aaKnown RBP15.41■□□□□ 0.06
SDC2-201ENST00000302190 USP17L10C9JJH3 530 aa15.4■□□□□ 0.06
SDC2-201ENST00000302190 GFPT2O94808 682 aa15.4■□□□□ 0.06
SDC2-201ENST00000302190 VIMP08670 466 aaKnown RBP15.4■□□□□ 0.06
SDC2-201ENST00000302190 MAP2K2P36507 400 aa15.4■□□□□ 0.06
SDC2-201ENST00000302190 MED15Q96RN5 788 aa15.4■□□□□ 0.06
SDC2-201ENST00000302190 SH2D3AQ9BRG2 576 aa15.4■□□□□ 0.06
SDC2-201ENST00000302190 CAPN6Q9Y6Q1 641 aa15.4■□□□□ 0.06
SDC2-201ENST00000302190 POTEFA5A3E0 1075 aa15.4■□□□□ 0.06
SDC2-201ENST00000302190 ADAMTS3O15072 1205 aa15.4■□□□□ 0.06
SDC2-201ENST00000302190 POTEIP0CG38 1075 aa15.4■□□□□ 0.06
SDC2-201ENST00000302190 RPL13P26373 211 aaKnown RBP15.4■□□□□ 0.06
SDC2-201ENST00000302190 PPP1R2P41236 205 aa15.4■□□□□ 0.06
SDC2-201ENST00000302190 NNTQ13423 1086 aa15.4■□□□□ 0.06
SDC2-201ENST00000302190 R3HDM1Q15032 1099 aaKnown RBP15.4■□□□□ 0.06
SDC2-201ENST00000302190 EXOC3L4Q17RC7 722 aa15.4■□□□□ 0.06
SDC2-201ENST00000302190 POTEGQ6S5H5 508 aa15.4■□□□□ 0.06
SDC2-201ENST00000302190 POTEEQ6S8J3 1075 aa15.4■□□□□ 0.06
SDC2-201ENST00000302190 FBXL16Q8N461 479 aa15.4■□□□□ 0.06
SDC2-201ENST00000302190 SPATA4Q8NEY3 305 aa15.4■□□□□ 0.06
SDC2-201ENST00000302190 OSBPL9Q96SU4 736 aa15.4■□□□□ 0.06
SDC2-201ENST00000302190 KCNK9Q9NPC2 374 aa15.4■□□□□ 0.06
SDC2-201ENST00000302190 EMILIN3Q9NT22 766 aa15.4■□□□□ 0.06
SDC2-201ENST00000302190 STK32BQ9NY57 414 aa15.4■□□□□ 0.06
SDC2-201ENST00000302190 DMGDHQ9UI17 866 aaKnown RBP15.4■□□□□ 0.06
SDC2-201ENST00000302190 ANKRD62A6NC57 917 aa15.4■□□□□ 0.06
SDC2-201ENST00000302190 MYMKA6NI61 221 aa15.4■□□□□ 0.06
SDC2-201ENST00000302190 GCOM1H8Y6P7 765 aaPredicted RBP15.4■□□□□ 0.06
SDC2-201ENST00000302190 MYZAPP0CAP1 466 aa15.4■□□□□ 0.06
SDC2-201ENST00000302190 IFT88Q13099 833 aa15.4■□□□□ 0.06
SDC2-201ENST00000302190 CDKAL1Q5VV42 579 aa15.4■□□□□ 0.06
SDC2-201ENST00000302190 HAUS3Q68CZ6 603 aa15.4■□□□□ 0.06
SDC2-201ENST00000302190 PHLDB2Q86SQ0 1253 aa15.4■□□□□ 0.06
SDC2-201ENST00000302190 SERPINB13Q9UIV8 391 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms