RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 PAK1Q13153 545 aa17.56■□□□□ 0.4
HERPUD1-201ENST00000300302 UNC13DQ70J99 1090 aa17.56■□□□□ 0.4
HERPUD1-201ENST00000300302 TRMT44Q8IYL2 757 aaKnown RBP17.56■□□□□ 0.4
HERPUD1-201ENST00000300302 ZFP91Q96JP5 570 aaPredicted RBP17.56■□□□□ 0.4
HERPUD1-201ENST00000300302 EIF2AK1Q9BQI3 630 aaKnown RBP17.56■□□□□ 0.4
HERPUD1-201ENST00000300302 ASCC2Q9H1I8 757 aaPredicted RBP17.56■□□□□ 0.4
HERPUD1-201ENST00000300302 TUFT1Q9NNX1 390 aa17.56■□□□□ 0.4
HERPUD1-201ENST00000300302 A1CFQ9NQ94 594 aaKnown RBP17.56■□□□□ 0.4
HERPUD1-201ENST00000300302 RWDD2AQ9UIY3 292 aa17.56■□□□□ 0.4
HERPUD1-201ENST00000300302 POTEFA5A3E0 1075 aa17.55■□□□□ 0.4
HERPUD1-201ENST00000300302 E9PMD0 336 aa17.55■□□□□ 0.4
HERPUD1-201ENST00000300302 SERPINC1P01008 464 aa17.55■□□□□ 0.4
HERPUD1-201ENST00000300302 PLA2G4BP0C869 781 aa17.55■□□□□ 0.4
HERPUD1-201ENST00000300302 SPATA31C1P0DKV0 1188 aa17.55■□□□□ 0.4
HERPUD1-201ENST00000300302 MUTP22033 750 aa17.55■□□□□ 0.4
HERPUD1-201ENST00000300302 POTEGQ6S5H5 508 aa17.55■□□□□ 0.4
HERPUD1-201ENST00000300302 POTEEQ6S8J3 1075 aa17.55■□□□□ 0.4
HERPUD1-201ENST00000300302 RIOX2Q8IUF8 465 aa17.55■□□□□ 0.4
HERPUD1-201ENST00000300302 DDX12PQ92771 950 aa17.55■□□□□ 0.4
HERPUD1-201ENST00000300302 CTNND2Q9UQB3 1225 aa17.55■□□□□ 0.4
HERPUD1-201ENST00000300302 GDAQ9Y2T3 454 aa17.55■□□□□ 0.4
HERPUD1-201ENST00000300302 EML1O00423 815 aa17.54■□□□□ 0.4
HERPUD1-201ENST00000300302 CBFA2T2O43439 604 aa17.54■□□□□ 0.4
HERPUD1-201ENST00000300302 CHMP2AO43633 222 aa17.54■□□□□ 0.4
HERPUD1-201ENST00000300302 SSBP05455 408 aaKnown RBP eCLIP17.54■□□□□ 0.4
HERPUD1-201ENST00000300302 CDK11BP21127 795 aaKnown RBP17.54■□□□□ 0.4
HERPUD1-201ENST00000300302 PRCPP42785 496 aa17.54■□□□□ 0.4
HERPUD1-201ENST00000300302 HERVK_113P62684 666 aa17.54■□□□□ 0.4
HERPUD1-201ENST00000300302 FANCCQ00597 558 aa17.54■□□□□ 0.4
HERPUD1-201ENST00000300302 TPD52L1Q16890 204 aaPredicted RBP17.54■□□□□ 0.4
HERPUD1-201ENST00000300302 DYMQ7RTS9 669 aa17.54■□□□□ 0.4
HERPUD1-201ENST00000300302 ADSSL1Q8N142 457 aa17.54■□□□□ 0.4
HERPUD1-201ENST00000300302 SPC24Q8NBT2 197 aa17.54■□□□□ 0.4
HERPUD1-201ENST00000300302 AGO4Q9HCK5 861 aaKnown RBP17.54■□□□□ 0.4
HERPUD1-201ENST00000300302 IFNKQ9P0W0 207 aa17.54■□□□□ 0.4
HERPUD1-201ENST00000300302 BTBD7Q9P203 1132 aa17.54■□□□□ 0.4
HERPUD1-201ENST00000300302 PFASO15067 1338 aa17.54■□□□□ 0.4
HERPUD1-201ENST00000300302 PSMA7O14818 248 aa17.54■□□□□ 0.4
HERPUD1-201ENST00000300302 CELF2O95319 508 aaKnown RBP17.54■□□□□ 0.4
HERPUD1-201ENST00000300302 NR3C2P08235 984 aa17.54■□□□□ 0.4
HERPUD1-201ENST00000300302 ATP1A3P13637 1013 aa17.54■□□□□ 0.4
HERPUD1-201ENST00000300302 PSMD2Q13200 908 aa17.54■□□□□ 0.4
HERPUD1-201ENST00000300302 VSIG10LQ86VR7 867 aa17.54■□□□□ 0.4
HERPUD1-201ENST00000300302 NEK9Q8TD19 979 aa17.54■□□□□ 0.4
HERPUD1-201ENST00000300302 NELFBQ8WX92 580 aa17.54■□□□□ 0.4
HERPUD1-201ENST00000300302 HSD17B14Q9BPX1 270 aa17.54■□□□□ 0.4
HERPUD1-201ENST00000300302 SPATC1LQ9H0A9 340 aa17.54■□□□□ 0.4
HERPUD1-201ENST00000300302 TBC1D22BQ9NU19 505 aa17.54■□□□□ 0.4
HERPUD1-201ENST00000300302 MAFGO15525 162 aa17.53■□□□□ 0.4
HERPUD1-201ENST00000300302 STAM2O75886 525 aa17.53■□□□□ 0.4
HERPUD1-201ENST00000300302 COPB2P35606 906 aa17.53■□□□□ 0.4
HERPUD1-201ENST00000300302 STX17P56962 302 aa17.53■□□□□ 0.4
HERPUD1-201ENST00000300302 CYP4A11Q02928 519 aa17.53■□□□□ 0.4
HERPUD1-201ENST00000300302 MOGSQ13724 837 aa17.53■□□□□ 0.4
HERPUD1-201ENST00000300302 EPHA7Q15375 998 aa17.53■□□□□ 0.4
HERPUD1-201ENST00000300302 CHADLQ6NUI6 762 aa17.53■□□□□ 0.4
HERPUD1-201ENST00000300302 NLRX1Q86UT6 975 aa17.53■□□□□ 0.4
HERPUD1-201ENST00000300302 ANKRD35Q8N283 1001 aa17.53■□□□□ 0.4
HERPUD1-201ENST00000300302 MED15Q96RN5 788 aa17.53■□□□□ 0.4
HERPUD1-201ENST00000300302 XPO4Q9C0E2 1151 aaKnown RBP17.53■□□□□ 0.4
HERPUD1-201ENST00000300302 UNC45AQ9H3U1 944 aa17.53■□□□□ 0.4
HERPUD1-201ENST00000300302 GBA2Q9HCG7 927 aaPredicted RBP17.53■□□□□ 0.4
HERPUD1-201ENST00000300302 TESPA1A2RU30 521 aaPredicted RBP17.52■□□□□ 0.4
HERPUD1-201ENST00000300302 SLC25A27O95847 323 aa17.52■□□□□ 0.4
HERPUD1-201ENST00000300302 IDEP14735 1019 aa17.52■□□□□ 0.4
HERPUD1-201ENST00000300302 ZNF18P17022 549 aa17.52■□□□□ 0.4
HERPUD1-201ENST00000300302 UBASH3AP57075 661 aa17.52■□□□□ 0.4
HERPUD1-201ENST00000300302 COBLL1Q53SF7 1204 aa17.52■□□□□ 0.4
HERPUD1-201ENST00000300302 B3GNT9Q6UX72 402 aa17.52■□□□□ 0.4
HERPUD1-201ENST00000300302 GPBP1Q86WP2 473 aa17.52■□□□□ 0.4
HERPUD1-201ENST00000300302 C2orf69Q8N8R5 385 aa17.52■□□□□ 0.4
HERPUD1-201ENST00000300302 SYT2Q8N9I0 419 aaPredicted RBP17.52■□□□□ 0.4
HERPUD1-201ENST00000300302 DNERQ8NFT8 737 aa17.52■□□□□ 0.4
HERPUD1-201ENST00000300302 DHTKD1Q96HY7 919 aaPredicted RBP17.52■□□□□ 0.4
HERPUD1-201ENST00000300302 PURBQ96QR8 312 aaKnown RBP17.52■□□□□ 0.4
HERPUD1-201ENST00000300302 PAGR1Q9BTK6 254 aa17.52■□□□□ 0.4
HERPUD1-201ENST00000300302 TCEAL9Q9UHQ7 104 aa17.52■□□□□ 0.4
HERPUD1-201ENST00000300302 PNMA3Q9UL41 463 aa17.52■□□□□ 0.4
HERPUD1-201ENST00000300302 MAPK8IP1Q9UQF2 711 aa17.52■□□□□ 0.4
HERPUD1-201ENST00000300302 ITGBL1O95965 494 aaPredicted RBP17.52■□□□□ 0.39
HERPUD1-201ENST00000300302 KRT18P05783 430 aaKnown RBP17.52■□□□□ 0.39
HERPUD1-201ENST00000300302 GJA5P36382 358 aa17.52■□□□□ 0.39
HERPUD1-201ENST00000300302 SLC12A3P55017 1021 aa17.52■□□□□ 0.39
HERPUD1-201ENST00000300302 ZSCAN30Q86W11 494 aa17.52■□□□□ 0.39
HERPUD1-201ENST00000300302 TPH2Q8IWU9 490 aa17.52■□□□□ 0.39
HERPUD1-201ENST00000300302 CCDC65Q8IXS2 484 aa17.52■□□□□ 0.39
HERPUD1-201ENST00000300302 GPRASP2Q96D09 838 aa17.52■□□□□ 0.39
HERPUD1-201ENST00000300302 IWS1Q96ST2 819 aa17.52■□□□□ 0.39
HERPUD1-201ENST00000300302 RGL1Q9NZL6 768 aa17.52■□□□□ 0.39
HERPUD1-201ENST00000300302 ESPNB1AK53 854 aa17.51■□□□□ 0.39
HERPUD1-201ENST00000300302 SLITRK3O94933 977 aa17.51■□□□□ 0.39
HERPUD1-201ENST00000300302 EYA4O95677 639 aa17.51■□□□□ 0.39
HERPUD1-201ENST00000300302 CYP11B2P19099 503 aa17.51■□□□□ 0.39
HERPUD1-201ENST00000300302 GPAT2Q6NUI2 795 aa17.51■□□□□ 0.39
HERPUD1-201ENST00000300302 MIER3Q7Z3K6 550 aa17.51■□□□□ 0.39
HERPUD1-201ENST00000300302 NCAPG2Q86XI2 1143 aa17.51■□□□□ 0.39
HERPUD1-201ENST00000300302 FAM43AQ8N2R8 423 aa17.51■□□□□ 0.39
HERPUD1-201ENST00000300302 DNAJC19Q96DA6 116 aa17.51■□□□□ 0.39
HERPUD1-201ENST00000300302 DYDC2Q96IM9 177 aa17.51■□□□□ 0.39
HERPUD1-201ENST00000300302 CDHR1Q96JP9 859 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms