RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 TAL1P17542 331 aaPredicted RBP14.56□□□□□ -0.08
CASC4-201ENST00000299957 KCNJ6P48051 423 aa14.56□□□□□ -0.08
CASC4-201ENST00000299957 ICA1Q05084 483 aa14.56□□□□□ -0.08
CASC4-201ENST00000299957 CERKLQ49MI3 558 aaPredicted RBP14.56□□□□□ -0.08
CASC4-201ENST00000299957 HOOK3Q86VS8 718 aa14.56□□□□□ -0.08
CASC4-201ENST00000299957 NT5C3AQ9H0P0 336 aa14.56□□□□□ -0.08
CASC4-201ENST00000299957 SNX24Q9Y343 169 aa14.56□□□□□ -0.08
CASC4-201ENST00000299957 TCRBV5S4A2TA0A5A2 114 aa14.55□□□□□ -0.08
CASC4-201ENST00000299957 EZRP15311 586 aaKnown RBP14.55□□□□□ -0.08
CASC4-201ENST00000299957 CCDC93Q567U6 631 aa14.55□□□□□ -0.08
CASC4-201ENST00000299957 RUFY4Q6ZNE9 571 aa14.55□□□□□ -0.08
CASC4-201ENST00000299957 MAGOHBQ96A72 148 aaKnown RBP14.55□□□□□ -0.08
CASC4-201ENST00000299957 IL17RAQ96F46 866 aa14.55□□□□□ -0.08
CASC4-201ENST00000299957 BARHL2Q9NY43 387 aa14.55□□□□□ -0.08
CASC4-201ENST00000299957 AMACRQ9UHK6 382 aa14.55□□□□□ -0.08
CASC4-201ENST00000299957 PNPLA7Q6ZV29 1317 aa14.55□□□□□ -0.08
CASC4-201ENST00000299957 GOLGA8KD6RF30 607 aa14.55□□□□□ -0.08
CASC4-201ENST00000299957 CTNND1O60716 968 aaKnown RBP14.55□□□□□ -0.08
CASC4-201ENST00000299957 FGGP02679 453 aa14.55□□□□□ -0.08
CASC4-201ENST00000299957 AKR1B1P15121 316 aa14.55□□□□□ -0.08
CASC4-201ENST00000299957 KCNH2Q12809 1159 aa14.55□□□□□ -0.08
CASC4-201ENST00000299957 RBM17Q96I25 401 aaKnown RBP14.55□□□□□ -0.08
CASC4-201ENST00000299957 SLC4A9Q96Q91 983 aa14.55□□□□□ -0.08
CASC4-201ENST00000299957 SEMA3EO15041 775 aa14.55□□□□□ -0.08
CASC4-201ENST00000299957 POTEJP0CG39 1038 aa14.55□□□□□ -0.08
CASC4-201ENST00000299957 DENND2CQ68D51 928 aa14.55□□□□□ -0.08
CASC4-201ENST00000299957 SFR1Q86XK3 245 aa14.55□□□□□ -0.08
CASC4-201ENST00000299957 OGFOD1Q8N543 542 aa14.55□□□□□ -0.08
CASC4-201ENST00000299957 TRIM49P0CI25 452 aa14.54□□□□□ -0.08
CASC4-201ENST00000299957 TRIM49CP0CI26 452 aa14.54□□□□□ -0.08
CASC4-201ENST00000299957 FAM133BQ5BKY9 247 aaKnown RBP14.54□□□□□ -0.08
CASC4-201ENST00000299957 DLG5Q8TDM6 1919 aa14.54□□□□□ -0.08
CASC4-201ENST00000299957 AK8Q96MA6 479 aa14.54□□□□□ -0.08
CASC4-201ENST00000299957 LBHD1Q9BQE6 289 aaPredicted RBP14.54□□□□□ -0.08
CASC4-201ENST00000299957 PLA2G12BQ9BX93 195 aa14.54□□□□□ -0.08
CASC4-201ENST00000299957 SNX12Q9UMY4 172 aa14.54□□□□□ -0.08
CASC4-201ENST00000299957 COASYQ13057 564 aa14.54□□□□□ -0.08
CASC4-201ENST00000299957 SEC23AQ15436 765 aa14.54□□□□□ -0.08
CASC4-201ENST00000299957 C12orf60Q5U649 245 aa14.54□□□□□ -0.08
CASC4-201ENST00000299957 CACNA2D3Q8IZS8 1091 aa14.54□□□□□ -0.08
CASC4-201ENST00000299957 ARL8AQ96BM9 186 aa14.54□□□□□ -0.08
CASC4-201ENST00000299957 RGL1Q9NZL6 768 aa14.54□□□□□ -0.08
CASC4-201ENST00000299957 LMTK3Q96Q04 1460 aa14.53□□□□□ -0.08
CASC4-201ENST00000299957 ZBTB16Q05516 673 aa14.53□□□□□ -0.08
CASC4-201ENST00000299957 CCDC38Q502W7 563 aa14.53□□□□□ -0.08
CASC4-201ENST00000299957 FBXO11Q86XK2 927 aa14.53□□□□□ -0.08
CASC4-201ENST00000299957 GLIS3Q8NEA6 775 aa14.53□□□□□ -0.08
CASC4-201ENST00000299957 SYNCQ9H7C4 482 aa14.53□□□□□ -0.08
CASC4-201ENST00000299957 MTUS1Q9ULD2 1270 aa14.53□□□□□ -0.08
CASC4-201ENST00000299957 RABGAP1Q9Y3P9 1069 aa14.53□□□□□ -0.08
CASC4-201ENST00000299957 CAMTA2O94983 1202 aa14.53□□□□□ -0.08
CASC4-201ENST00000299957 HP1BP3Q5SSJ5 553 aaPredicted RBP14.53□□□□□ -0.08
CASC4-201ENST00000299957 CCNI2Q6ZMN8 369 aaPredicted RBP14.53□□□□□ -0.08
CASC4-201ENST00000299957 RSRC2Q7L4I2 434 aaKnown RBP14.53□□□□□ -0.08
CASC4-201ENST00000299957 FBF1Q8TES7 1133 aa14.53□□□□□ -0.08
CASC4-201ENST00000299957 TEKT1Q969V4 418 aa14.53□□□□□ -0.08
CASC4-201ENST00000299957 HPCAL4Q9UM19 191 aa14.53□□□□□ -0.08
CASC4-201ENST00000299957 SLC9A1P19634 815 aa14.53□□□□□ -0.08
CASC4-201ENST00000299957 SSTR3P32745 418 aaPredicted RBP14.53□□□□□ -0.08
CASC4-201ENST00000299957 KAZNQ674X7 775 aa14.53□□□□□ -0.08
CASC4-201ENST00000299957 GJB7Q6PEY0 223 aa14.53□□□□□ -0.08
CASC4-201ENST00000299957 UNC13DQ70J99 1090 aa14.53□□□□□ -0.08
CASC4-201ENST00000299957 MIGA2Q7L4E1 593 aa14.53□□□□□ -0.08
CASC4-201ENST00000299957 RIOK1Q9BRS2 568 aaKnown RBP14.53□□□□□ -0.08
CASC4-201ENST00000299957 K7ENM7 598 aa14.52□□□□□ -0.08
CASC4-201ENST00000299957 DAPK3O43293 454 aa14.52□□□□□ -0.08
CASC4-201ENST00000299957 ZRANB2O95218 330 aaKnown RBP eCLIP14.52□□□□□ -0.089e-9■■■□□ 15.7
CASC4-201ENST00000299957 KLRC1P26715 233 aa14.52□□□□□ -0.08
CASC4-201ENST00000299957 TMOD1P28289 359 aa14.52□□□□□ -0.08
CASC4-201ENST00000299957 HERVK_113P62684 666 aa14.52□□□□□ -0.08
CASC4-201ENST00000299957 MDM2Q00987 491 aaPredicted RBP14.52□□□□□ -0.08
CASC4-201ENST00000299957 GLYCTKQ8IVS8 523 aa14.52□□□□□ -0.08
CASC4-201ENST00000299957 FAM186BQ8IYM0 893 aa14.52□□□□□ -0.08
CASC4-201ENST00000299957 HSD3B7Q9H2F3 369 aa14.52□□□□□ -0.08
CASC4-201ENST00000299957 TTLL1O95922 423 aa14.52□□□□□ -0.08
CASC4-201ENST00000299957 SRGNP10124 158 aa14.52□□□□□ -0.08
CASC4-201ENST00000299957 MAP2K2P36507 400 aa14.52□□□□□ -0.08
CASC4-201ENST00000299957 SF3B2Q13435 895 aaKnown RBP14.52□□□□□ -0.08
CASC4-201ENST00000299957 CYP4F22Q6NT55 531 aa14.52□□□□□ -0.08
CASC4-201ENST00000299957 TADA2BQ86TJ2 420 aa14.52□□□□□ -0.08
CASC4-201ENST00000299957 PACSIN1Q9BY11 444 aa14.52□□□□□ -0.08
CASC4-201ENST00000299957 ITSN1Q15811 1721 aa14.52□□□□□ -0.09
CASC4-201ENST00000299957 ACSL3O95573 720 aa14.52□□□□□ -0.09
CASC4-201ENST00000299957 AFPP02771 609 aaKnown RBP14.52□□□□□ -0.09
CASC4-201ENST00000299957 TMED8Q6PL24 325 aaPredicted RBP14.52□□□□□ -0.09
CASC4-201ENST00000299957 HOOK2Q96ED9 719 aa14.52□□□□□ -0.09
CASC4-201ENST00000299957 CD209Q9NNX6 404 aa14.52□□□□□ -0.09
CASC4-201ENST00000299957 TMOD4Q9NZQ9 345 aa14.52□□□□□ -0.09
CASC4-201ENST00000299957 TACC3Q9Y6A5 838 aa14.52□□□□□ -0.09
CASC4-201ENST00000299957 PGRMC1O00264 195 aaKnown RBP14.51□□□□□ -0.09
CASC4-201ENST00000299957 PCP11498 1178 aaKnown RBP14.51□□□□□ -0.09
CASC4-201ENST00000299957 ZNF365Q70YC5 407 aa14.51□□□□□ -0.09
CASC4-201ENST00000299957 LRP10Q7Z4F1 713 aa14.51□□□□□ -0.09
CASC4-201ENST00000299957 TTC16Q8NEE8 873 aa14.51□□□□□ -0.09
CASC4-201ENST00000299957 TSKSQ9UJT2 592 aa14.51□□□□□ -0.09
CASC4-201ENST00000299957 RCCD1A6NED2 376 aa14.51□□□□□ -0.09
CASC4-201ENST00000299957 SLC37A4O43826 429 aa14.51□□□□□ -0.09
CASC4-201ENST00000299957 SERPING1P05155 500 aa14.51□□□□□ -0.09
CASC4-201ENST00000299957 ALAS1P13196 640 aa14.51□□□□□ -0.09
CASC4-201ENST00000299957 SARSP49591 514 aaKnown RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms