RNA–Protein interactions for RNA: ENST00000298552.7

TSC1-201, Transcript of TSC complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSC1, Length 8,604 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-201ENST00000298552 TEX46H3BTG2 121 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 PTGS1P23219 599 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 DAB2IPQ5VWQ8 1189 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 PPP1R2P1Q96PQ5 205 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 NT5C3AQ9H0P0 336 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 CAMSAP2Q08AD1 1489 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 SPARCP09486 303 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 BCAP31P51572 246 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 RCN1Q15293 331 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 MTERF2Q49AM1 385 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 SLC44A4Q53GD3 710 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 ICE2Q659A1 982 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 APOA5Q6Q788 366 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 RELL1Q8IUW5 271 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 IMPACTQ9P2X3 320 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 PA2G4Q9UQ80 394 aaKnown RBP8.06□□□□□ -1.12
TSC1-201ENST00000298552 EIF2S3P41091 472 aaKnown RBP8.06□□□□□ -1.12
TSC1-201ENST00000298552 IMPG1Q17R60 797 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 DENND6BQ8NEG7 585 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 TRERF1Q96PN7 1200 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 USP26Q9BXU7 913 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 DNAJC25Q9H1X3 360 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 GID8Q9NWU2 228 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 VTI1BQ9UEU0 232 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 ARMCX3Q9UH62 379 aaPredicted RBP8.06□□□□□ -1.12
TSC1-201ENST00000298552 DSEQ9UL01 958 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 ZNF148Q9UQR1 794 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 SUPT6HQ7KZ85 1726 aaKnown RBP8.06□□□□□ -1.12
TSC1-201ENST00000298552 RTL1A6NKG5 1358 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 GNAT3A8MTJ3 354 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 H3BMM5 538 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 SNX2O60749 519 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 PDE9AO76083 593 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 ZRANB3Q5FWF4 1079 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 KIAA1841Q6NSI8 718 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 SZRD1Q7Z422 152 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 ZNF555Q8NEP9 628 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 TRIM58Q8NG06 486 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 VPS33AQ96AX1 596 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 DDX50Q9BQ39 737 aaKnown RBP8.06□□□□□ -1.12
TSC1-201ENST00000298552 RAD21L1Q9H4I0 556 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 STK38LQ9Y2H1 464 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 AP3B1O00203 1094 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 TBC1D4O60343 1298 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 KRT38O76015 456 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 PROSER2Q86WR7 435 aaPredicted RBP8.06□□□□□ -1.12
TSC1-201ENST00000298552 MYLK4Q86YV6 388 aaPredicted RBP8.06□□□□□ -1.12
TSC1-201ENST00000298552 CHERPQ8IWX8 916 aaKnown RBP8.06□□□□□ -1.12
TSC1-201ENST00000298552 OSBPL6Q9BZF3 934 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 ADNPQ9H2P0 1102 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 ATG3Q9NT62 314 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.06□□□□□ -1.12
TSC1-201ENST00000298552 SERTAD1Q9UHV2 236 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 HPS5Q9UPZ3 1129 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 SF3B1O75533 1304 aaKnown RBP eCLIP8.06□□□□□ -1.124e-6■■■■■ 73.6
TSC1-201ENST00000298552 IQANK1A0A1B0GTG1 560 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 ITGADQ13349 1161 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 CCNG2Q16589 344 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 RSRC2Q7L4I2 434 aaKnown RBP8.06□□□□□ -1.12
TSC1-201ENST00000298552 SCYL3Q8IZE3 742 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 MRFAP1L1Q96HT8 127 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 KLHL28Q9NXS3 571 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 ABCC11Q96J66 1382 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 A0A087WUV0 522 aaPredicted RBP8.06□□□□□ -1.12
TSC1-201ENST00000298552 UBAP1LF5GYI3 381 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 MECOMQ03112 1051 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 TNFAIP1Q13829 316 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 DDX54Q8TDD1 881 aaKnown RBP8.06□□□□□ -1.12
TSC1-201ENST00000298552 PHACTR3Q96KR7 559 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 CATSPER2Q96P56 530 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 PSD3Q9NYI0 1048 aa8.06□□□□□ -1.12
TSC1-201ENST00000298552 AATKQ6ZMQ8 1374 aa8.05□□□□□ -1.12
TSC1-201ENST00000298552 TXNDC2Q86VQ3 553 aa8.05□□□□□ -1.12
TSC1-201ENST00000298552 GDAP1Q8TB36 358 aa8.05□□□□□ -1.12
TSC1-201ENST00000298552 MDM1Q8TC05 714 aa8.05□□□□□ -1.12
TSC1-201ENST00000298552 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.05□□□□□ -1.12
TSC1-201ENST00000298552 SECISBP2LQ93073 1101 aaKnown RBP8.05□□□□□ -1.12
TSC1-201ENST00000298552 AP1S3Q96PC3 154 aa8.05□□□□□ -1.12
TSC1-201ENST00000298552 RPN2P04844 631 aa8.05□□□□□ -1.12
TSC1-201ENST00000298552 USP39Q53GS9 565 aaKnown RBP8.05□□□□□ -1.12
TSC1-201ENST00000298552 TRPM8Q7Z2W7 1104 aa8.05□□□□□ -1.12
TSC1-201ENST00000298552 LRRC59Q96AG4 307 aaKnown RBP8.05□□□□□ -1.12
TSC1-201ENST00000298552 VAT1LQ9HCJ6 419 aa8.05□□□□□ -1.12
TSC1-201ENST00000298552 C1orf112Q9NSG2 853 aa8.05□□□□□ -1.12
TSC1-201ENST00000298552 MED7O43513 233 aa8.05□□□□□ -1.12
TSC1-201ENST00000298552 ANP32DO95626 131 aa8.05□□□□□ -1.12
TSC1-201ENST00000298552 CPP00450 1065 aa8.05□□□□□ -1.12
TSC1-201ENST00000298552 YWHAHQ04917 246 aaPredicted RBP8.05□□□□□ -1.12
TSC1-201ENST00000298552 TERF2Q15554 542 aa8.05□□□□□ -1.12
TSC1-201ENST00000298552 TTC6Q86TZ1 520 aa8.05□□□□□ -1.12
TSC1-201ENST00000298552 ENGASEQ8NFI3 743 aa8.05□□□□□ -1.12
TSC1-201ENST00000298552 RNASE11Q8TAA1 199 aaKnown RBP8.05□□□□□ -1.12
TSC1-201ENST00000298552 HAVCR1Q96D42 359 aa8.05□□□□□ -1.12
TSC1-201ENST00000298552 TBC1D23Q9NUY8 699 aa8.05□□□□□ -1.12
TSC1-201ENST00000298552 NBPF26B4DH59 902 aa8.05□□□□□ -1.12
TSC1-201ENST00000298552 SERPINB1P30740 379 aa8.05□□□□□ -1.12
TSC1-201ENST00000298552 ICA1Q05084 483 aa8.05□□□□□ -1.12
TSC1-201ENST00000298552 MICU3Q86XE3 530 aa8.05□□□□□ -1.12
TSC1-201ENST00000298552 FYNP06241 537 aa8.05□□□□□ -1.12
TSC1-201ENST00000298552 TNFAIP2Q03169 654 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms