RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 A0A087X0B3 334 aa7.42□□□□□ -1.22
TMC1-201ENST00000297784 A0A0G2JLL6 359 aaPredicted RBP7.42□□□□□ -1.22
TMC1-201ENST00000297784 CCDC194A0A1B0GVG4 234 aa7.42□□□□□ -1.22
TMC1-201ENST00000297784 SPDYE5A6NIY4 337 aa7.42□□□□□ -1.22
TMC1-201ENST00000297784 SLC37A4O43826 429 aa7.42□□□□□ -1.22
TMC1-201ENST00000297784 STX10O60499 249 aa7.42□□□□□ -1.22
TMC1-201ENST00000297784 CUTAO60888 179 aa7.42□□□□□ -1.22
TMC1-201ENST00000297784 BRD2P25440 801 aaKnown RBP7.42□□□□□ -1.22
TMC1-201ENST00000297784 GNG11P61952 73 aa7.42□□□□□ -1.22
TMC1-201ENST00000297784 TBX2Q13207 712 aaPredicted RBP7.42□□□□□ -1.22
TMC1-201ENST00000297784 CT47A1Q5JQC4 288 aaPredicted RBP7.42□□□□□ -1.22
TMC1-201ENST00000297784 PRRT2Q7Z6L0 340 aaPredicted RBP7.42□□□□□ -1.22
TMC1-201ENST00000297784 ATG4CQ96DT6 458 aa7.42□□□□□ -1.22
TMC1-201ENST00000297784 OTUD5Q96G74 571 aa7.42□□□□□ -1.22
TMC1-201ENST00000297784 FAN1Q9Y2M0 1017 aa7.42□□□□□ -1.22
TMC1-201ENST00000297784 A0A087WWV3 80 aa7.41□□□□□ -1.22
TMC1-201ENST00000297784 CCNT1O60563 726 aaKnown RBP7.41□□□□□ -1.22
TMC1-201ENST00000297784 PFKFB1P16118 471 aa7.41□□□□□ -1.22
TMC1-201ENST00000297784 CHMP4BP1P59074 171 aa7.41□□□□□ -1.22
TMC1-201ENST00000297784 TMEM132BQ14DG7 1078 aa7.41□□□□□ -1.22
TMC1-201ENST00000297784 NONOQ15233 471 aaKnown RBP eCLIP7.41□□□□□ -1.22
TMC1-201ENST00000297784 DNAJC21Q5F1R6 531 aaKnown RBP7.41□□□□□ -1.22
TMC1-201ENST00000297784 SAMD1Q6SPF0 538 aaPredicted RBP7.41□□□□□ -1.22
TMC1-201ENST00000297784 KRT25Q7Z3Z0 450 aa7.41□□□□□ -1.22
TMC1-201ENST00000297784 KRI1Q8N9T8 703 aaKnown RBP7.41□□□□□ -1.22
TMC1-201ENST00000297784 OPTNQ96CV9 577 aa7.41□□□□□ -1.22
TMC1-201ENST00000297784 EPSTI1Q96J88 318 aa7.41□□□□□ -1.22
TMC1-201ENST00000297784 MTMR9Q96QG7 549 aa7.41□□□□□ -1.22
TMC1-201ENST00000297784 SDF4Q9BRK5 362 aa7.41□□□□□ -1.22
TMC1-201ENST00000297784 ACBD3Q9H3P7 528 aa7.41□□□□□ -1.22
TMC1-201ENST00000297784 VIPAS39Q9H9C1 493 aa7.41□□□□□ -1.22
TMC1-201ENST00000297784 RAVER2Q9HCJ3 691 aaKnown RBP7.41□□□□□ -1.22
TMC1-201ENST00000297784 COL20A1Q9P218 1284 aa7.41□□□□□ -1.22
TMC1-201ENST00000297784 ZNF214Q9UL59 606 aaPredicted RBP7.41□□□□□ -1.22
TMC1-201ENST00000297784 KCNH4Q9UQ05 1017 aa7.41□□□□□ -1.22
TMC1-201ENST00000297784 CSADQ9Y600 493 aa7.41□□□□□ -1.22
TMC1-201ENST00000297784 NFIBO00712 420 aa7.41□□□□□ -1.22
TMC1-201ENST00000297784 TDP2O95551 362 aa7.41□□□□□ -1.22
TMC1-201ENST00000297784 DSG3P32926 999 aa7.41□□□□□ -1.22
TMC1-201ENST00000297784 AARSP49588 968 aaKnown RBP eCLIP7.41□□□□□ -1.22
TMC1-201ENST00000297784 MRPL12P52815 198 aaKnown RBP7.41□□□□□ -1.22
TMC1-201ENST00000297784 LETM2Q2VYF4 491 aa7.41□□□□□ -1.22
TMC1-201ENST00000297784 NEK8Q86SG6 692 aa7.41□□□□□ -1.22
TMC1-201ENST00000297784 ERO1BQ86YB8 467 aa7.41□□□□□ -1.22
TMC1-201ENST00000297784 ZNF579Q8NAF0 562 aaKnown RBP7.41□□□□□ -1.22
TMC1-201ENST00000297784 GJA10Q969M2 543 aa7.41□□□□□ -1.22
TMC1-201ENST00000297784 DHX58Q96C10 678 aa7.41□□□□□ -1.22
TMC1-201ENST00000297784 R3HDMLQ9H3Y0 253 aa7.41□□□□□ -1.22
TMC1-201ENST00000297784 SPDYE16A6NNV3 312 aaPredicted RBP7.4□□□□□ -1.22
TMC1-201ENST00000297784 USP8P40818 1118 aa7.4□□□□□ -1.22
TMC1-201ENST00000297784 UBASH3AP57075 661 aa7.4□□□□□ -1.22
TMC1-201ENST00000297784 COG2Q14746 738 aa7.4□□□□□ -1.22
TMC1-201ENST00000297784 GPAT2Q6NUI2 795 aa7.4□□□□□ -1.22
TMC1-201ENST00000297784 CNNM3Q8NE01 707 aa7.4□□□□□ -1.22
TMC1-201ENST00000297784 RBM46Q8TBY0 533 aaKnown RBP7.4□□□□□ -1.22
TMC1-201ENST00000297784 HAS1Q92839 578 aa7.4□□□□□ -1.22
TMC1-201ENST00000297784 A1CFQ9NQ94 594 aaKnown RBP7.4□□□□□ -1.22
TMC1-201ENST00000297784 FAM86B1E9PN63 330 aa7.4□□□□□ -1.22
TMC1-201ENST00000297784 ZNF202O95125 648 aa7.4□□□□□ -1.22
TMC1-201ENST00000297784 FAM86B2P0C5J1 330 aa7.4□□□□□ -1.22
TMC1-201ENST00000297784 CDC25AP30304 524 aa7.4□□□□□ -1.22
TMC1-201ENST00000297784 HOXA7P31268 230 aaPredicted RBP7.4□□□□□ -1.22
TMC1-201ENST00000297784 HSD17B4P51659 736 aa7.4□□□□□ -1.22
TMC1-201ENST00000297784 GHRHRQ02643 423 aa7.4□□□□□ -1.22
TMC1-201ENST00000297784 PPP4R3AQ6IN85 833 aa7.4□□□□□ -1.22
TMC1-201ENST00000297784 CPXCR1Q8N123 301 aa7.4□□□□□ -1.22
TMC1-201ENST00000297784 CYP2W1Q8TAV3 490 aa7.4□□□□□ -1.22
TMC1-201ENST00000297784 LRRC15Q8TF66 581 aa7.4□□□□□ -1.22
TMC1-201ENST00000297784 ERCC4Q92889 916 aaPredicted RBP7.4□□□□□ -1.22
TMC1-201ENST00000297784 LENG9Q96B70 501 aa7.4□□□□□ -1.22
TMC1-201ENST00000297784 MS4A4AQ96JQ5 239 aa7.4□□□□□ -1.22
TMC1-201ENST00000297784 BAG1Q99933 345 aaPredicted RBP7.4□□□□□ -1.22
TMC1-201ENST00000297784 ZNF408Q9H9D4 720 aa7.4□□□□□ -1.22
TMC1-201ENST00000297784 TUBE1Q9UJT0 475 aa7.4□□□□□ -1.22
TMC1-201ENST00000297784 CDC23Q9UJX2 597 aa7.4□□□□□ -1.22
TMC1-201ENST00000297784 CYP3A7-CYP3A51PA0A087WV96 503 aa7.4□□□□□ -1.23
TMC1-201ENST00000297784 CYP3A7P24462 503 aa7.4□□□□□ -1.23
TMC1-201ENST00000297784 NF2P35240 595 aa7.4□□□□□ -1.23
TMC1-201ENST00000297784 MDM2Q00987 491 aaPredicted RBP7.4□□□□□ -1.23
TMC1-201ENST00000297784 PPIL2Q13356 520 aa7.4□□□□□ -1.23
TMC1-201ENST00000297784 TTLL12Q14166 644 aaPredicted RBP7.4□□□□□ -1.23
TMC1-201ENST00000297784 LONRF3Q496Y0 759 aa7.4□□□□□ -1.23
TMC1-201ENST00000297784 HSP90B2PQ58FF3 399 aa7.4□□□□□ -1.23
TMC1-201ENST00000297784 PURBQ96QR8 312 aaKnown RBP7.4□□□□□ -1.23
TMC1-201ENST00000297784 CCPG1Q9ULG6 757 aa7.4□□□□□ -1.23
TMC1-201ENST00000297784 CEP131Q9UPN4 1083 aa7.4□□□□□ -1.23
TMC1-201ENST00000297784 ATP2A1O14983 1001 aa7.39□□□□□ -1.23
TMC1-201ENST00000297784 SHOX2O60902 331 aaPredicted RBP7.39□□□□□ -1.23
TMC1-201ENST00000297784 CFBP00751 764 aa7.39□□□□□ -1.23
TMC1-201ENST00000297784 MYL5Q02045 173 aa7.39□□□□□ -1.23
TMC1-201ENST00000297784 MCM6Q14566 821 aa7.39□□□□□ -1.23
TMC1-201ENST00000297784 CASP8Q14790 479 aa7.39□□□□□ -1.23
TMC1-201ENST00000297784 ARL6IP4Q66PJ3 421 aaKnown RBP7.39□□□□□ -1.23
TMC1-201ENST00000297784 GPATCH11Q8N954 259 aa7.39□□□□□ -1.23
TMC1-201ENST00000297784 BANK1Q8NDB2 785 aa7.39□□□□□ -1.23
TMC1-201ENST00000297784 ANKRD20A12PQ8NF67 263 aa7.39□□□□□ -1.23
TMC1-201ENST00000297784 SYMPKQ92797 1274 aaKnown RBP7.39□□□□□ -1.23
TMC1-201ENST00000297784 MBOAT7Q96N66 472 aa7.39□□□□□ -1.23
TMC1-201ENST00000297784 ANO3Q9BYT9 981 aa7.39□□□□□ -1.23
TMC1-201ENST00000297784 ABCB6Q9NP58 842 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms