RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 KCTD17Q8N5Z5 321 aa17.38■□□□□ 0.37
LSM6-201ENST00000296581 MB21D1Q8N884 522 aa17.38■□□□□ 0.37
LSM6-201ENST00000296581 RIT2Q99578 217 aa17.38■□□□□ 0.37
LSM6-201ENST00000296581 ZNF577Q9BSK1 485 aa17.38■□□□□ 0.37
LSM6-201ENST00000296581 ACAD9Q9H845 621 aa17.38■□□□□ 0.37
LSM6-201ENST00000296581 PXMP2Q9NR77 195 aa17.38■□□□□ 0.37
LSM6-201ENST00000296581 GOLGA6L6A8MZA4 724 aa17.37■□□□□ 0.37
LSM6-201ENST00000296581 EML1O00423 815 aa17.37■□□□□ 0.37
LSM6-201ENST00000296581 FANCCQ00597 558 aa17.37■□□□□ 0.37
LSM6-201ENST00000296581 KLHL10Q6JEL2 608 aa17.37■□□□□ 0.37
LSM6-201ENST00000296581 UNC13DQ70J99 1090 aa17.37■□□□□ 0.37
LSM6-201ENST00000296581 ADSSL1Q8N142 457 aa17.37■□□□□ 0.37
LSM6-201ENST00000296581 ZFP91Q96JP5 570 aaPredicted RBP17.37■□□□□ 0.37
LSM6-201ENST00000296581 RMDN3Q96TC7 470 aa17.37■□□□□ 0.37
LSM6-201ENST00000296581 PDCD2LQ9BRP1 358 aa17.37■□□□□ 0.37
LSM6-201ENST00000296581 JADE2Q9NQC1 790 aa17.37■□□□□ 0.37
LSM6-201ENST00000296581 RWDD2AQ9UIY3 292 aa17.37■□□□□ 0.37
LSM6-201ENST00000296581 CLEC11AQ9Y240 323 aa17.37■□□□□ 0.37
LSM6-201ENST00000296581 E9PMD0 336 aa17.37■□□□□ 0.37
LSM6-201ENST00000296581 PRCPP42785 496 aa17.37■□□□□ 0.37
LSM6-201ENST00000296581 MOGSQ13724 837 aa17.37■□□□□ 0.37
LSM6-201ENST00000296581 XRRA1Q6P2D8 792 aa17.37■□□□□ 0.37
LSM6-201ENST00000296581 SPC24Q8NBT2 197 aa17.37■□□□□ 0.37
LSM6-201ENST00000296581 OPTNQ96CV9 577 aa17.37■□□□□ 0.37
LSM6-201ENST00000296581 WDR11Q9BZH6 1224 aa17.37■□□□□ 0.37
LSM6-201ENST00000296581 EXOC1Q9NV70 894 aa17.37■□□□□ 0.37
LSM6-201ENST00000296581 AGTPBP1Q9UPW5 1226 aa17.37■□□□□ 0.37
LSM6-201ENST00000296581 VGLL3A8MV65 326 aa17.36■□□□□ 0.37
LSM6-201ENST00000296581 GAS7O60861 476 aa17.36■□□□□ 0.37
LSM6-201ENST00000296581 EIF2AK2P19525 551 aaKnown RBP17.36■□□□□ 0.37
LSM6-201ENST00000296581 PDE4DQ08499 809 aa17.36■□□□□ 0.37
LSM6-201ENST00000296581 COBLL1Q53SF7 1204 aa17.36■□□□□ 0.37
LSM6-201ENST00000296581 MAP1SQ66K74 1059 aaPredicted RBP17.36■□□□□ 0.37
LSM6-201ENST00000296581 CHST13Q8NET6 341 aa17.36■□□□□ 0.37
LSM6-201ENST00000296581 EIF2AK1Q9BQI3 630 aaKnown RBP17.36■□□□□ 0.37
LSM6-201ENST00000296581 XPO4Q9C0E2 1151 aaKnown RBP17.36■□□□□ 0.37
LSM6-201ENST00000296581 IFNKQ9P0W0 207 aa17.36■□□□□ 0.37
LSM6-201ENST00000296581 CTNND2Q9UQB3 1225 aa17.36■□□□□ 0.37
LSM6-201ENST00000296581 LCTP09848 1927 aa17.36■□□□□ 0.37
LSM6-201ENST00000296581 POTEFA5A3E0 1075 aa17.36■□□□□ 0.37
LSM6-201ENST00000296581 IPO5O00410 1097 aaKnown RBP17.36■□□□□ 0.37
LSM6-201ENST00000296581 TPM3P06753 285 aa17.36■□□□□ 0.37
LSM6-201ENST00000296581 PLA2G4BP0C869 781 aa17.36■□□□□ 0.37
LSM6-201ENST00000296581 PAK1Q13153 545 aa17.36■□□□□ 0.37
LSM6-201ENST00000296581 POTEGQ6S5H5 508 aa17.36■□□□□ 0.37
LSM6-201ENST00000296581 DDX12PQ92771 950 aa17.36■□□□□ 0.37
LSM6-201ENST00000296581 HSD17B14Q9BPX1 270 aa17.36■□□□□ 0.37
LSM6-201ENST00000296581 TEKT3Q9BXF9 490 aa17.36■□□□□ 0.37
LSM6-201ENST00000296581 TUFT1Q9NNX1 390 aa17.36■□□□□ 0.37
LSM6-201ENST00000296581 A1CFQ9NQ94 594 aaKnown RBP17.36■□□□□ 0.37
LSM6-201ENST00000296581 KCNH7Q9NS40 1196 aa17.36■□□□□ 0.37
LSM6-201ENST00000296581 CYP39A1Q9NYL5 469 aa17.36■□□□□ 0.37
LSM6-201ENST00000296581 STX17P56962 302 aa17.35■□□□□ 0.37
LSM6-201ENST00000296581 PLS1Q14651 629 aa17.35■□□□□ 0.37
LSM6-201ENST00000296581 ARHGEF16Q5VV41 709 aa17.35■□□□□ 0.37
LSM6-201ENST00000296581 DNAJC19Q96DA6 116 aa17.35■□□□□ 0.37
LSM6-201ENST00000296581 BTBD7Q9P203 1132 aa17.35■□□□□ 0.37
LSM6-201ENST00000296581 TRAF5O00463 557 aa17.35■□□□□ 0.37
LSM6-201ENST00000296581 MUTP22033 750 aa17.35■□□□□ 0.37
LSM6-201ENST00000296581 PPP1R2P41236 205 aa17.35■□□□□ 0.37
LSM6-201ENST00000296581 SLC12A3P55017 1021 aa17.35■□□□□ 0.37
LSM6-201ENST00000296581 IRX3P78415 501 aaPredicted RBP17.35■□□□□ 0.37
LSM6-201ENST00000296581 EHHADHQ08426 723 aa17.35■□□□□ 0.37
LSM6-201ENST00000296581 CDKAL1Q5VV42 579 aa17.35■□□□□ 0.37
LSM6-201ENST00000296581 FASTKD5Q7L8L6 764 aaKnown RBP17.35■□□□□ 0.37
LSM6-201ENST00000296581 RIOX2Q8IUF8 465 aa17.35■□□□□ 0.37
LSM6-201ENST00000296581 DRC7Q8IY82 874 aa17.35■□□□□ 0.37
LSM6-201ENST00000296581 NELFBQ8WX92 580 aa17.35■□□□□ 0.37
LSM6-201ENST00000296581 PURBQ96QR8 312 aaKnown RBP17.35■□□□□ 0.37
LSM6-201ENST00000296581 ASCC2Q9H1I8 757 aaPredicted RBP17.35■□□□□ 0.37
LSM6-201ENST00000296581 UNC45AQ9H3U1 944 aa17.35■□□□□ 0.37
LSM6-201ENST00000296581 AGO4Q9HCK5 861 aaKnown RBP17.35■□□□□ 0.37
LSM6-201ENST00000296581 SAMSN1Q9NSI8 373 aaKnown RBP17.35■□□□□ 0.37
LSM6-201ENST00000296581 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.35■□□□□ 0.37
LSM6-201ENST00000296581 ZKSCAN5Q9Y2L8 839 aa17.35■□□□□ 0.37
LSM6-201ENST00000296581 GJA5P36382 358 aa17.34■□□□□ 0.37
LSM6-201ENST00000296581 STK4Q13043 487 aa17.34■□□□□ 0.37
LSM6-201ENST00000296581 STIM1Q13586 685 aa17.34■□□□□ 0.37
LSM6-201ENST00000296581 DYMQ7RTS9 669 aa17.34■□□□□ 0.37
LSM6-201ENST00000296581 VSIG10LQ86VR7 867 aa17.34■□□□□ 0.37
LSM6-201ENST00000296581 DNM3Q9UQ16 869 aa17.34■□□□□ 0.37
LSM6-201ENST00000296581 DHX15O43143 795 aaKnown RBP17.33■□□□□ 0.37
LSM6-201ENST00000296581 CBFA2T2O43439 604 aa17.33■□□□□ 0.37
LSM6-201ENST00000296581 MTMR1Q13613 665 aa17.33■□□□□ 0.37
LSM6-201ENST00000296581 EPHA7Q15375 998 aa17.33■□□□□ 0.37
LSM6-201ENST00000296581 TAF3Q5VWG9 929 aa17.33■□□□□ 0.37
LSM6-201ENST00000296581 NSUN6Q8TEA1 469 aaKnown RBP17.33■□□□□ 0.37
LSM6-201ENST00000296581 DHTKD1Q96HY7 919 aaPredicted RBP17.33■□□□□ 0.37
LSM6-201ENST00000296581 BMP2KQ9NSY1 1161 aaPredicted RBP17.33■□□□□ 0.37
LSM6-201ENST00000296581 FBXO40Q9UH90 709 aa17.33■□□□□ 0.37
LSM6-201ENST00000296581 PSMA7O14818 248 aa17.33■□□□□ 0.36
LSM6-201ENST00000296581 SLITRK3O94933 977 aa17.33■□□□□ 0.36
LSM6-201ENST00000296581 SERPINC1P01008 464 aa17.33■□□□□ 0.36
LSM6-201ENST00000296581 NR3C2P08235 984 aa17.33■□□□□ 0.36
LSM6-201ENST00000296581 MYCLP12524 364 aaPredicted RBP17.33■□□□□ 0.36
LSM6-201ENST00000296581 CYP11B2P19099 503 aa17.33■□□□□ 0.36
LSM6-201ENST00000296581 CCND2P30279 289 aa17.33■□□□□ 0.36
LSM6-201ENST00000296581 UBASH3AP57075 661 aa17.33■□□□□ 0.36
LSM6-201ENST00000296581 PSMC6P62333 389 aa17.33■□□□□ 0.36
LSM6-201ENST00000296581 HERVK_113P62684 666 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms