RNA–Protein interactions for RNA: ENST00000295688.7

CCT3-201, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT3, Length 2,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-201ENST00000295688 SWT1Q5T5J6 900 aaKnown RBP16.33■□□□□ 0.2
CCT3-201ENST00000295688 MEI1Q5TIA1 1274 aa16.33■□□□□ 0.2
CCT3-201ENST00000295688 ZIM3Q96PE6 472 aa16.33■□□□□ 0.2
CCT3-201ENST00000295688 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.33■□□□□ 0.2
CCT3-201ENST00000295688 GRIN2DO15399 1336 aa16.32■□□□□ 0.2
CCT3-201ENST00000295688 PLIN4Q96Q06 1357 aa16.32■□□□□ 0.2
CCT3-201ENST00000295688 BTNL10A8MVZ5 291 aa16.32■□□□□ 0.2
CCT3-201ENST00000295688 PALMO75781 387 aa16.32■□□□□ 0.2
CCT3-201ENST00000295688 HEXIM1O94992 359 aaKnown RBP16.32■□□□□ 0.2
CCT3-201ENST00000295688 LRRC41Q15345 812 aa16.32■□□□□ 0.2
CCT3-201ENST00000295688 IFI16Q16666 785 aaKnown RBP16.32■□□□□ 0.2
CCT3-201ENST00000295688 EMC10Q5UCC4 262 aa16.32■□□□□ 0.2
CCT3-201ENST00000295688 PPP4R3CPQ6ZMV5 832 aa16.32■□□□□ 0.2
CCT3-201ENST00000295688 TRIM59Q8IWR1 403 aa16.32■□□□□ 0.2
CCT3-201ENST00000295688 IQCKQ8N0W5 287 aa16.32■□□□□ 0.2
CCT3-201ENST00000295688 TAF4BQ92750 862 aa16.32■□□□□ 0.2
CCT3-201ENST00000295688 AIPL1Q9NZN9 384 aa16.32■□□□□ 0.2
CCT3-201ENST00000295688 PNMA6FA0A0J9YX94 578 aa16.31■□□□□ 0.2
CCT3-201ENST00000295688 NOL4O94818 638 aa16.31■□□□□ 0.2
CCT3-201ENST00000295688 MRPL12P52815 198 aaKnown RBP16.31■□□□□ 0.2
CCT3-201ENST00000295688 POLR2FP61218 127 aaKnown RBP16.31■□□□□ 0.2
CCT3-201ENST00000295688 GRIK5Q16478 980 aa16.31■□□□□ 0.2
CCT3-201ENST00000295688 CDC37Q16543 378 aaPredicted RBP16.31■□□□□ 0.2
CCT3-201ENST00000295688 TTMPQ5BVD1 217 aa16.31■□□□□ 0.2
CCT3-201ENST00000295688 MMS22LQ6ZRQ5 1243 aa16.31■□□□□ 0.2
CCT3-201ENST00000295688 COA7Q96BR5 231 aa16.31■□□□□ 0.2
CCT3-201ENST00000295688 HINFPQ9BQA5 517 aa16.31■□□□□ 0.2
CCT3-201ENST00000295688 EPB41L5Q9HCM4 733 aa16.31■□□□□ 0.2
CCT3-201ENST00000295688 EHD2Q9NZN4 543 aa16.31■□□□□ 0.2
CCT3-201ENST00000295688 SRP68Q9UHB9 627 aaKnown RBP16.31■□□□□ 0.2
CCT3-201ENST00000295688 DDX25Q9UHL0 483 aaKnown RBP16.31■□□□□ 0.2
CCT3-201ENST00000295688 FAM169AQ9Y6X4 670 aa16.31■□□□□ 0.2
CCT3-201ENST00000295688 EPS15P42566 896 aa16.31■□□□□ 0.2
CCT3-201ENST00000295688 TNNI2P48788 182 aa16.31■□□□□ 0.2
CCT3-201ENST00000295688 GTF2A1P52655 376 aaPredicted RBP16.31■□□□□ 0.2
CCT3-201ENST00000295688 ATP2B2Q01814 1243 aa16.31■□□□□ 0.2
CCT3-201ENST00000295688 ASIC2Q16515 512 aa16.31■□□□□ 0.2
CCT3-201ENST00000295688 TBC1D5Q92609 795 aa16.31■□□□□ 0.2
CCT3-201ENST00000295688 ARL8AQ96BM9 186 aa16.31■□□□□ 0.2
CCT3-201ENST00000295688 GLT8D2Q9H1C3 349 aa16.31■□□□□ 0.2
CCT3-201ENST00000295688 SMARCAL1Q9NZC9 954 aa16.31■□□□□ 0.2
CCT3-201ENST00000295688 BZW2Q9Y6E2 419 aaKnown RBP16.31■□□□□ 0.2
CCT3-201ENST00000295688 ZEB2O60315 1214 aa16.3■□□□□ 0.2
CCT3-201ENST00000295688 TLR2O60603 784 aa16.3■□□□□ 0.2
CCT3-201ENST00000295688 SNHG28P0DPA3 235 aa16.3■□□□□ 0.2
CCT3-201ENST00000295688 GUCY2DQ02846 1103 aa16.3■□□□□ 0.2
CCT3-201ENST00000295688 KLHL30Q0D2K2 578 aa16.3■□□□□ 0.2
CCT3-201ENST00000295688 KDM7AQ6ZMT4 941 aa16.3■□□□□ 0.2
CCT3-201ENST00000295688 KCNK18Q7Z418 384 aa16.3■□□□□ 0.2
CCT3-201ENST00000295688 CUL5Q93034 780 aa16.3■□□□□ 0.2
CCT3-201ENST00000295688 MS4A14Q96JA4 679 aa16.3■□□□□ 0.2
CCT3-201ENST00000295688 CCDC43Q96MW1 224 aaKnown RBP16.3■□□□□ 0.2
CCT3-201ENST00000295688 NUDT12Q9BQG2 462 aa16.3■□□□□ 0.2
CCT3-201ENST00000295688 MTMR4Q9NYA4 1195 aa16.3■□□□□ 0.2
CCT3-201ENST00000295688 PCDHA12Q9UN75 941 aa16.3■□□□□ 0.2
CCT3-201ENST00000295688 EDIL3O43854 480 aa16.3■□□□□ 0.2
CCT3-201ENST00000295688 GLI1P08151 1106 aa16.3■□□□□ 0.2
CCT3-201ENST00000295688 CARSP49589 748 aaKnown RBP16.3■□□□□ 0.2
CCT3-201ENST00000295688 KIAA0753Q2KHM9 967 aa16.3■□□□□ 0.2
CCT3-201ENST00000295688 EDRF1Q3B7T1 1238 aa16.3■□□□□ 0.2
CCT3-201ENST00000295688 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.3■□□□□ 0.2
CCT3-201ENST00000295688 ZC3H3Q8IXZ2 948 aaKnown RBP16.3■□□□□ 0.2
CCT3-201ENST00000295688 MICALL1Q8N3F8 863 aa16.3■□□□□ 0.2
CCT3-201ENST00000295688 TBC1D22AQ8WUA7 517 aa16.3■□□□□ 0.2
CCT3-201ENST00000295688 PBKQ96KB5 322 aa16.3■□□□□ 0.2
CCT3-201ENST00000295688 CD209Q9NNX6 404 aa16.3■□□□□ 0.2
CCT3-201ENST00000295688 SWAP70Q9UH65 585 aa16.3■□□□□ 0.2
CCT3-201ENST00000295688 NFU1Q9UMS0 254 aa16.3■□□□□ 0.2
CCT3-201ENST00000295688 RTCBQ9Y3I0 505 aaKnown RBP16.3■□□□□ 0.2
CCT3-201ENST00000295688 NHSQ6T4R5 1651 aa16.29■□□□□ 0.2
CCT3-201ENST00000295688 FRMPD2Q68DX3 1309 aaPredicted RBP16.29■□□□□ 0.2
CCT3-201ENST00000295688 SRRM3A6NNA2 597 aaPredicted RBP16.29■□□□□ 0.2
CCT3-201ENST00000295688 ERLIN2O94905 339 aa16.29■□□□□ 0.2
CCT3-201ENST00000295688 ATP2B4P23634 1241 aa16.29■□□□□ 0.2
CCT3-201ENST00000295688 KLRC1P26715 233 aa16.29■□□□□ 0.2
CCT3-201ENST00000295688 ANXA13P27216 316 aa16.29■□□□□ 0.2
CCT3-201ENST00000295688 CLK2P49760 499 aaKnown RBP16.29■□□□□ 0.2
CCT3-201ENST00000295688 RAPGEF1Q13905 1077 aa16.29■□□□□ 0.2
CCT3-201ENST00000295688 MICALCLQ6ZW33 695 aa16.29■□□□□ 0.2
CCT3-201ENST00000295688 IFT81Q8WYA0 676 aa16.29■□□□□ 0.2
CCT3-201ENST00000295688 INPP4AQ96PE3 977 aaPredicted RBP16.29■□□□□ 0.2
CCT3-201ENST00000295688 PAGR1Q9BTK6 254 aa16.29■□□□□ 0.2
CCT3-201ENST00000295688 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.29■□□□□ 0.2
CCT3-201ENST00000295688 GEMIN8Q9NWZ8 242 aaKnown RBP16.29■□□□□ 0.2
CCT3-201ENST00000295688 ATP8B3O60423 1300 aa16.29■□□□□ 0.2
CCT3-201ENST00000295688 HMGB1P1B2RPK0 211 aaPredicted RBP16.28■□□□□ 0.2
CCT3-201ENST00000295688 CETN3O15182 167 aa16.28■□□□□ 0.2
CCT3-201ENST00000295688 IL1R1P14778 569 aa16.28■□□□□ 0.2
CCT3-201ENST00000295688 RHBDL3P58872 404 aa16.28■□□□□ 0.2
CCT3-201ENST00000295688 MRPS25P82663 173 aaKnown RBP16.28■□□□□ 0.2
CCT3-201ENST00000295688 CCDC24Q8N4L8 307 aa16.28■□□□□ 0.2
CCT3-201ENST00000295688 CEP89Q96ST8 783 aa16.28■□□□□ 0.2
CCT3-201ENST00000295688 KRT12Q99456 494 aa16.28■□□□□ 0.2
CCT3-201ENST00000295688 GAKO14976 1311 aa16.28■□□□□ 0.2
CCT3-201ENST00000295688 PITPNM2Q9BZ72 1349 aa16.28■□□□□ 0.2
CCT3-201ENST00000295688 NDUFAB1O14561 156 aa16.28■□□□□ 0.2
CCT3-201ENST00000295688 GNPATO15228 680 aa16.28■□□□□ 0.2
CCT3-201ENST00000295688 RPS6KA1Q15418 735 aa16.28■□□□□ 0.2
CCT3-201ENST00000295688 SKIDA1Q1XH10 827 aa16.28■□□□□ 0.2
CCT3-201ENST00000295688 USP38Q8NB14 1042 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms