RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 NAB2Q15742 525 aa11.26□□□□□ -0.61
LMX1A-201ENST00000294816 MEI1Q5TIA1 1274 aa11.26□□□□□ -0.61
LMX1A-201ENST00000294816 LRIG3Q6UXM1 1119 aa11.26□□□□□ -0.61
LMX1A-201ENST00000294816 ADAT2Q7Z6V5 191 aaKnown RBP11.26□□□□□ -0.61
LMX1A-201ENST00000294816 CCDC197Q8NCU1 140 aa11.26□□□□□ -0.61
LMX1A-201ENST00000294816 GLIS3Q8NEA6 775 aa11.26□□□□□ -0.61
LMX1A-201ENST00000294816 VAT1LQ9HCJ6 419 aa11.26□□□□□ -0.61
LMX1A-201ENST00000294816 PRDM11Q9NQV5 511 aa11.26□□□□□ -0.61
LMX1A-201ENST00000294816 GGT7Q9UJ14 662 aa11.26□□□□□ -0.61
LMX1A-201ENST00000294816 GGA2Q9UJY4 613 aa11.26□□□□□ -0.61
LMX1A-201ENST00000294816 SART1O43290 800 aaKnown RBP11.25□□□□□ -0.61
LMX1A-201ENST00000294816 LCA5LO95447 670 aa11.25□□□□□ -0.61
LMX1A-201ENST00000294816 SERPING1P05155 500 aa11.25□□□□□ -0.61
LMX1A-201ENST00000294816 VIMP08670 466 aaKnown RBP11.25□□□□□ -0.61
LMX1A-201ENST00000294816 GOLGA8HP0CJ92 632 aa11.25□□□□□ -0.61
LMX1A-201ENST00000294816 NELFCDQ8IXH7 590 aa11.25□□□□□ -0.61
LMX1A-201ENST00000294816 CELF4Q9BZC1 486 aaKnown RBP11.25□□□□□ -0.61
LMX1A-201ENST00000294816 PNMA2Q9UL42 364 aa11.25□□□□□ -0.61
LMX1A-201ENST00000294816 JAG2Q9Y219 1238 aa11.25□□□□□ -0.61
LMX1A-201ENST00000294816 L3MBTL1Q9Y468 752 aa11.25□□□□□ -0.61
LMX1A-201ENST00000294816 PHRF1Q9P1Y6 1649 aaKnown RBP11.25□□□□□ -0.61
LMX1A-201ENST00000294816 CCDC189A1A4V9 331 aa11.25□□□□□ -0.61
LMX1A-201ENST00000294816 HGSO14964 777 aaPredicted RBP11.25□□□□□ -0.61
LMX1A-201ENST00000294816 ATP6V1G2O95670 118 aa11.25□□□□□ -0.61
LMX1A-201ENST00000294816 IFNAR2P48551 515 aa11.25□□□□□ -0.61
LMX1A-201ENST00000294816 ELF3P78545 371 aaPredicted RBP11.25□□□□□ -0.61
LMX1A-201ENST00000294816 HGSNATQ68CP4 663 aa11.25□□□□□ -0.61
LMX1A-201ENST00000294816 ANKS4BQ8N8V4 417 aa11.25□□□□□ -0.61
LMX1A-201ENST00000294816 NSMCE1Q8WV22 266 aa11.25□□□□□ -0.61
LMX1A-201ENST00000294816 UIMC1Q96RL1 719 aa11.25□□□□□ -0.61
LMX1A-201ENST00000294816 C7orf25Q9BPX7 421 aa11.25□□□□□ -0.61
LMX1A-201ENST00000294816 ANAPC4Q9UJX5 808 aa11.25□□□□□ -0.61
LMX1A-201ENST00000294816 SSU72P8A0A1W2PR75 194 aa11.25□□□□□ -0.61
LMX1A-201ENST00000294816 WTIPA6NIX2 430 aaPredicted RBP11.25□□□□□ -0.61
LMX1A-201ENST00000294816 EIF4E1BA6NMX2 242 aaKnown RBP11.25□□□□□ -0.61
LMX1A-201ENST00000294816 TRIM37O94972 964 aa11.25□□□□□ -0.61
LMX1A-201ENST00000294816 PPP1R2P41236 205 aa11.25□□□□□ -0.61
LMX1A-201ENST00000294816 NAPAP54920 295 aa11.25□□□□□ -0.61
LMX1A-201ENST00000294816 CUL1Q13616 776 aa11.25□□□□□ -0.61
LMX1A-201ENST00000294816 ASIC2Q16515 512 aa11.25□□□□□ -0.61
LMX1A-201ENST00000294816 TAX1BP1Q86VP1 789 aa11.25□□□□□ -0.61
LMX1A-201ENST00000294816 TATDN2Q93075 761 aa11.25□□□□□ -0.61
LMX1A-201ENST00000294816 FAXDC2Q96IV6 333 aa11.25□□□□□ -0.61
LMX1A-201ENST00000294816 PSMD1Q99460 953 aa11.25□□□□□ -0.61
LMX1A-201ENST00000294816 ZHX3Q9H4I2 956 aa11.25□□□□□ -0.61
LMX1A-201ENST00000294816 ATP6V0A4Q9HBG4 840 aa11.25□□□□□ -0.61
LMX1A-201ENST00000294816 MYMKA6NI61 221 aa11.24□□□□□ -0.61
LMX1A-201ENST00000294816 TLR2O60603 784 aa11.24□□□□□ -0.61
LMX1A-201ENST00000294816 ITGA4P13612 1032 aa11.24□□□□□ -0.61
LMX1A-201ENST00000294816 MRPL12P52815 198 aaKnown RBP11.24□□□□□ -0.61
LMX1A-201ENST00000294816 CENPPQ6IPU0 288 aa11.24□□□□□ -0.61
LMX1A-201ENST00000294816 CHADLQ6NUI6 762 aa11.24□□□□□ -0.61
LMX1A-201ENST00000294816 PNMA1Q8ND90 353 aa11.24□□□□□ -0.61
LMX1A-201ENST00000294816 CHMP6Q96FZ7 201 aa11.24□□□□□ -0.61
LMX1A-201ENST00000294816 ELAC2Q9BQ52 826 aaKnown RBP11.24□□□□□ -0.61
LMX1A-201ENST00000294816 CUEDC2Q9H467 287 aa11.24□□□□□ -0.61
LMX1A-201ENST00000294816 LRRC4CQ9HCJ2 640 aa11.24□□□□□ -0.61
LMX1A-201ENST00000294816 ZBTB1Q9Y2K1 713 aa11.24□□□□□ -0.61
LMX1A-201ENST00000294816 TTI1O43156 1089 aa11.24□□□□□ -0.61
LMX1A-201ENST00000294816 KCNMA1Q12791 1236 aa11.24□□□□□ -0.61
LMX1A-201ENST00000294816 MTMR3Q13615 1198 aa11.24□□□□□ -0.61
LMX1A-201ENST00000294816 BYSLQ13895 437 aaKnown RBP11.24□□□□□ -0.61
LMX1A-201ENST00000294816 ASTE1Q2TB18 679 aaPredicted RBP11.24□□□□□ -0.61
LMX1A-201ENST00000294816 EMC10Q5UCC4 262 aa11.24□□□□□ -0.61
LMX1A-201ENST00000294816 DZIP3Q86Y13 1208 aaKnown RBP11.24□□□□□ -0.61
LMX1A-201ENST00000294816 CUL5Q93034 780 aa11.24□□□□□ -0.61
LMX1A-201ENST00000294816 STX8Q9UNK0 236 aa11.24□□□□□ -0.61
LMX1A-201ENST00000294816 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.24□□□□□ -0.61
LMX1A-201ENST00000294816 NOC2LQ9Y3T9 749 aaKnown RBP11.24□□□□□ -0.61
LMX1A-201ENST00000294816 ATP6V0A2Q9Y487 856 aa11.24□□□□□ -0.61
LMX1A-201ENST00000294816 CCT8L1PA6NM43 557 aa11.24□□□□□ -0.61
LMX1A-201ENST00000294816 PGRMC1O00264 195 aaKnown RBP11.24□□□□□ -0.61
LMX1A-201ENST00000294816 KIF4AO95239 1232 aa11.24□□□□□ -0.61
LMX1A-201ENST00000294816 TFAP4Q01664 338 aa11.24□□□□□ -0.61
LMX1A-201ENST00000294816 CHRNDQ07001 517 aa11.24□□□□□ -0.61
LMX1A-201ENST00000294816 MICAL1Q8TDZ2 1067 aa11.24□□□□□ -0.61
LMX1A-201ENST00000294816 XPO6Q96QU8 1125 aaKnown RBP11.24□□□□□ -0.61
LMX1A-201ENST00000294816 SPAG5Q96R06 1193 aa11.24□□□□□ -0.61
LMX1A-201ENST00000294816 RIOK1Q9BRS2 568 aaKnown RBP11.24□□□□□ -0.61
LMX1A-201ENST00000294816 TRIM51Q9BSJ1 452 aa11.24□□□□□ -0.61
LMX1A-201ENST00000294816 SWAP70Q9UH65 585 aa11.24□□□□□ -0.61
LMX1A-201ENST00000294816 CD2APQ9Y5K6 639 aa11.24□□□□□ -0.61
LMX1A-201ENST00000294816 NUP188Q5SRE5 1749 aa11.23□□□□□ -0.61
LMX1A-201ENST00000294816 FLT1P17948 1338 aa11.23□□□□□ -0.61
LMX1A-201ENST00000294816 H0YGN5 161 aa11.23□□□□□ -0.61
LMX1A-201ENST00000294816 MMEP08473 750 aa11.23□□□□□ -0.61
LMX1A-201ENST00000294816 DRD4P21917 467 aa11.23□□□□□ -0.61
LMX1A-201ENST00000294816 XRCC4Q13426 336 aa11.23□□□□□ -0.61
LMX1A-201ENST00000294816 SLC18A3Q16572 532 aa11.23□□□□□ -0.61
LMX1A-201ENST00000294816 DAAM2Q86T65 1068 aa11.23□□□□□ -0.61
LMX1A-201ENST00000294816 CCT6BQ92526 530 aa11.23□□□□□ -0.61
LMX1A-201ENST00000294816 SPDL1Q96EA4 605 aa11.23□□□□□ -0.61
LMX1A-201ENST00000294816 SAMD15Q9P1V8 674 aa11.23□□□□□ -0.61
LMX1A-201ENST00000294816 CEP72Q9P209 647 aa11.23□□□□□ -0.61
LMX1A-201ENST00000294816 NFS1Q9Y697 457 aa11.23□□□□□ -0.61
LMX1A-201ENST00000294816 PARP4Q9UKK3 1724 aaKnown RBP11.23□□□□□ -0.61
LMX1A-201ENST00000294816 PPP1R12AO14974 1030 aaPredicted RBP11.23□□□□□ -0.61
LMX1A-201ENST00000294816 ORC4O43929 436 aa11.23□□□□□ -0.61
LMX1A-201ENST00000294816 MARCH6O60337 910 aa11.23□□□□□ -0.61
LMX1A-201ENST00000294816 CHN1P15882 459 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms