RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 PPATQ06203 517 aa10.2□□□□□ -0.78
PDPN-201ENST00000294489 PCNX4Q63HM2 1172 aa10.2□□□□□ -0.78
PDPN-201ENST00000294489 LBX2Q6XYB7 198 aa10.2□□□□□ -0.78
PDPN-201ENST00000294489 UNC13DQ70J99 1090 aa10.2□□□□□ -0.78
PDPN-201ENST00000294489 KRT26Q7Z3Y9 468 aa10.2□□□□□ -0.78
PDPN-201ENST00000294489 PRRT2Q7Z6L0 340 aaPredicted RBP10.2□□□□□ -0.78
PDPN-201ENST00000294489 SYTL5Q8TDW5 730 aaPredicted RBP10.2□□□□□ -0.78
PDPN-201ENST00000294489 GJA10Q969M2 543 aa10.2□□□□□ -0.78
PDPN-201ENST00000294489 BAG1Q99933 345 aaPredicted RBP10.2□□□□□ -0.78
PDPN-201ENST00000294489 POLR3CQ9BUI4 534 aaPredicted RBP10.2□□□□□ -0.78
PDPN-201ENST00000294489 THAP9Q9H5L6 903 aa10.2□□□□□ -0.78
PDPN-201ENST00000294489 BMP2KQ9NSY1 1161 aaPredicted RBP10.2□□□□□ -0.78
PDPN-201ENST00000294489 KCNH4Q9UQ05 1017 aa10.2□□□□□ -0.78
PDPN-201ENST00000294489 PAXBP1Q9Y5B6 917 aa10.2□□□□□ -0.78
PDPN-201ENST00000294489 ARHGAP6O43182 974 aa10.2□□□□□ -0.78
PDPN-201ENST00000294489 TEX33O43247 280 aa10.2□□□□□ -0.78
PDPN-201ENST00000294489 SPATA31C1P0DKV0 1188 aa10.2□□□□□ -0.78
PDPN-201ENST00000294489 MUTP22033 750 aa10.2□□□□□ -0.78
PDPN-201ENST00000294489 CEP55Q53EZ4 464 aa10.2□□□□□ -0.78
PDPN-201ENST00000294489 CEP135Q66GS9 1140 aa10.2□□□□□ -0.78
PDPN-201ENST00000294489 E4F1Q66K89 784 aaPredicted RBP10.2□□□□□ -0.78
PDPN-201ENST00000294489 DLK2Q6UY11 383 aa10.2□□□□□ -0.78
PDPN-201ENST00000294489 KCNK18Q7Z418 384 aa10.2□□□□□ -0.78
PDPN-201ENST00000294489 CYP2W1Q8TAV3 490 aa10.2□□□□□ -0.78
PDPN-201ENST00000294489 MXRA8Q9BRK3 442 aa10.2□□□□□ -0.78
PDPN-201ENST00000294489 TMOD4Q9NZQ9 345 aa10.2□□□□□ -0.78
PDPN-201ENST00000294489 UBIAD1Q9Y5Z9 338 aa10.2□□□□□ -0.78
PDPN-201ENST00000294489 TRIM49BA6NDI0 452 aa10.2□□□□□ -0.78
PDPN-201ENST00000294489 MYMKA6NI61 221 aa10.2□□□□□ -0.78
PDPN-201ENST00000294489 AKR1B15C9JRZ8 316 aaPredicted RBP10.2□□□□□ -0.78
PDPN-201ENST00000294489 IRF6O14896 467 aa10.2□□□□□ -0.78
PDPN-201ENST00000294489 PPP1R12BO60237 982 aaPredicted RBP10.2□□□□□ -0.78
PDPN-201ENST00000294489 STX10O60499 249 aa10.2□□□□□ -0.78
PDPN-201ENST00000294489 CCNE1P24864 410 aa10.2□□□□□ -0.78
PDPN-201ENST00000294489 EEF1GP26641 437 aaKnown RBP10.2□□□□□ -0.78
PDPN-201ENST00000294489 RPA1P27694 616 aa10.2□□□□□ -0.78
PDPN-201ENST00000294489 ZNF76P36508 570 aa10.2□□□□□ -0.78
PDPN-201ENST00000294489 COPB1P53618 953 aaKnown RBP10.2□□□□□ -0.78
PDPN-201ENST00000294489 STK4Q13043 487 aa10.2□□□□□ -0.78
PDPN-201ENST00000294489 HAUS3Q68CZ6 603 aa10.2□□□□□ -0.78
PDPN-201ENST00000294489 OTOP1Q7RTM1 612 aa10.2□□□□□ -0.78
PDPN-201ENST00000294489 FCHSD1Q86WN1 690 aa10.2□□□□□ -0.78
PDPN-201ENST00000294489 PROCA1Q8NCQ7 364 aaPredicted RBP10.2□□□□□ -0.78
PDPN-201ENST00000294489 ERMNQ8TAM6 284 aa10.2□□□□□ -0.78
PDPN-201ENST00000294489 P2RX5Q93086 422 aa10.2□□□□□ -0.78
PDPN-201ENST00000294489 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.2□□□□□ -0.78
PDPN-201ENST00000294489 ITIH6Q6UXX5 1313 aa10.19□□□□□ -0.78
PDPN-201ENST00000294489 SPDYE5A6NIY4 337 aa10.19□□□□□ -0.78
PDPN-201ENST00000294489 SPDYE16A6NNV3 312 aaPredicted RBP10.19□□□□□ -0.78
PDPN-201ENST00000294489 PBX1P40424 430 aa10.19□□□□□ -0.78
PDPN-201ENST00000294489 ADKP55263 362 aaKnown RBP10.19□□□□□ -0.78
PDPN-201ENST00000294489 XRRA1Q6P2D8 792 aa10.19□□□□□ -0.78
PDPN-201ENST00000294489 FOXR2Q6PJQ5 311 aa10.19□□□□□ -0.78
PDPN-201ENST00000294489 POTEEQ6S8J3 1075 aa10.19□□□□□ -0.78
PDPN-201ENST00000294489 NYAP1Q6ZVC0 841 aa10.19□□□□□ -0.78
PDPN-201ENST00000294489 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.19□□□□□ -0.78
PDPN-201ENST00000294489 CSGALNACT2Q8N6G5 542 aa10.19□□□□□ -0.78
PDPN-201ENST00000294489 TC2NQ8N9U0 490 aa10.19□□□□□ -0.78
PDPN-201ENST00000294489 TRERF1Q96PN7 1200 aa10.19□□□□□ -0.78
PDPN-201ENST00000294489 SRRTQ9BXP5 876 aaKnown RBP10.19□□□□□ -0.78
PDPN-201ENST00000294489 VPS16Q9H269 839 aa10.19□□□□□ -0.78
PDPN-201ENST00000294489 HOXC10Q9NYD6 342 aa10.19□□□□□ -0.78
PDPN-201ENST00000294489 IQCA1LA6NCM1 817 aa10.19□□□□□ -0.78
PDPN-201ENST00000294489 CXCL11O14625 94 aa10.19□□□□□ -0.78
PDPN-201ENST00000294489 MED24O75448 989 aa10.19□□□□□ -0.78
PDPN-201ENST00000294489 TUBB4AP04350 444 aa10.19□□□□□ -0.78
PDPN-201ENST00000294489 IDEP14735 1019 aa10.19□□□□□ -0.78
PDPN-201ENST00000294489 GOLGA8FQ08AF8 430 aa10.19□□□□□ -0.78
PDPN-201ENST00000294489 GOLGA8DPQ0D2H9 430 aa10.19□□□□□ -0.78
PDPN-201ENST00000294489 PSMD2Q13200 908 aa10.19□□□□□ -0.78
PDPN-201ENST00000294489 MOGSQ13724 837 aa10.19□□□□□ -0.78
PDPN-201ENST00000294489 TMEM132BQ14DG7 1078 aa10.19□□□□□ -0.78
PDPN-201ENST00000294489 LDLRAD1Q5T700 205 aa10.19□□□□□ -0.78
PDPN-201ENST00000294489 TTI2Q6NXR4 508 aa10.19□□□□□ -0.78
PDPN-201ENST00000294489 DYMQ7RTS9 669 aa10.19□□□□□ -0.78
PDPN-201ENST00000294489 ERO1BQ86YB8 467 aa10.19□□□□□ -0.78
PDPN-201ENST00000294489 FAM114A1Q8IWE2 563 aa10.19□□□□□ -0.78
PDPN-201ENST00000294489 ANKRD13AQ8IZ07 590 aa10.19□□□□□ -0.78
PDPN-201ENST00000294489 DDX12PQ92771 950 aa10.19□□□□□ -0.78
PDPN-201ENST00000294489 DNAJC19Q96DA6 116 aa10.19□□□□□ -0.78
PDPN-201ENST00000294489 RIT2Q99578 217 aa10.19□□□□□ -0.78
PDPN-201ENST00000294489 TAB2Q9NYJ8 693 aa10.19□□□□□ -0.78
PDPN-201ENST00000294489 KIAA1217Q5T5P2 1943 aa10.19□□□□□ -0.78
PDPN-201ENST00000294489 FRMD3A2A2Y4 597 aa10.18□□□□□ -0.78
PDPN-201ENST00000294489 DYNC1I1O14576 645 aa10.18□□□□□ -0.78
PDPN-201ENST00000294489 ZSCAN12O43309 604 aa10.18□□□□□ -0.78
PDPN-201ENST00000294489 FCER1AP12319 257 aa10.18□□□□□ -0.78
PDPN-201ENST00000294489 ALAS1P13196 640 aa10.18□□□□□ -0.78
PDPN-201ENST00000294489 PMS1P54277 932 aaKnown RBP10.18□□□□□ -0.78
PDPN-201ENST00000294489 SLC12A3P55017 1021 aa10.18□□□□□ -0.78
PDPN-201ENST00000294489 PNMA8AQ86V59 439 aaPredicted RBP10.18□□□□□ -0.78
PDPN-201ENST00000294489 CATSPER3Q86XQ3 398 aa10.18□□□□□ -0.78
PDPN-201ENST00000294489 CNGA4Q8IV77 575 aa10.18□□□□□ -0.78
PDPN-201ENST00000294489 ZNF592Q92610 1267 aa10.18□□□□□ -0.78
PDPN-201ENST00000294489 PPP1R13BQ96KQ4 1090 aa10.18□□□□□ -0.78
PDPN-201ENST00000294489 PANX2Q96RD6 677 aa10.18□□□□□ -0.78
PDPN-201ENST00000294489 HSD17B14Q9BPX1 270 aa10.18□□□□□ -0.78
PDPN-201ENST00000294489 KIAA1024Q9UPX6 916 aa10.18□□□□□ -0.78
PDPN-201ENST00000294489 RIPK3Q9Y572 518 aa10.18□□□□□ -0.78
PDPN-201ENST00000294489 CSADQ9Y600 493 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms