RNA–Protein interactions for RNA: ENST00000294161.10

TTC9C-201, Transcript of tetratricopeptide repeat domain 9C, humanhuman

TSL 1 (best)

Gene TTC9C, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9C-201ENST00000294161 USH1GQ495M9 461 aa16.4■□□□□ 0.22
TTC9C-201ENST00000294161 SPDYE2Q495Y8 402 aa16.4■□□□□ 0.22
TTC9C-201ENST00000294161 PPP4R3CPQ6ZMV5 832 aa16.4■□□□□ 0.22
TTC9C-201ENST00000294161 KCNK18Q7Z418 384 aa16.4■□□□□ 0.22
TTC9C-201ENST00000294161 GPBP1Q86WP2 473 aa16.4■□□□□ 0.22
TTC9C-201ENST00000294161 MTMR14Q8NCE2 650 aa16.4■□□□□ 0.22
TTC9C-201ENST00000294161 NDST4Q9H3R1 872 aa16.4■□□□□ 0.22
TTC9C-201ENST00000294161 DCAF8L1A6NGE4 600 aa16.39■□□□□ 0.21
TTC9C-201ENST00000294161 SHROOM1Q2M3G4 852 aaPredicted RBP16.39■□□□□ 0.21
TTC9C-201ENST00000294161 KIF4BQ2VIQ3 1234 aa16.39■□□□□ 0.21
TTC9C-201ENST00000294161 MIIPQ5JXC2 388 aa16.39■□□□□ 0.21
TTC9C-201ENST00000294161 FAM83AQ86UY5 434 aa16.39■□□□□ 0.21
TTC9C-201ENST00000294161 ETNPPLQ8TBG4 499 aa16.39■□□□□ 0.21
TTC9C-201ENST00000294161 ZNF526Q8TF50 670 aaPredicted RBP16.39■□□□□ 0.21
TTC9C-201ENST00000294161 GOLGA1Q92805 767 aa16.39■□□□□ 0.21
TTC9C-201ENST00000294161 NAPGQ99747 312 aaPredicted RBP16.39■□□□□ 0.21
TTC9C-201ENST00000294161 SLF1Q9BQI6 1058 aa16.39■□□□□ 0.21
TTC9C-201ENST00000294161 CLRN2A0PK11 232 aa16.38■□□□□ 0.21
TTC9C-201ENST00000294161 RNF225M0QZC1 329 aaPredicted RBP16.38■□□□□ 0.21
TTC9C-201ENST00000294161 RPA1P27694 616 aa16.38■□□□□ 0.21
TTC9C-201ENST00000294161 NBPF9Q3BBW0 867 aa16.38■□□□□ 0.21
TTC9C-201ENST00000294161 TXLNBQ8N3L3 684 aa16.38■□□□□ 0.21
TTC9C-201ENST00000294161 GPR161Q8N6U8 529 aaKnown RBP16.38■□□□□ 0.21
TTC9C-201ENST00000294161 ACRBPQ8NEB7 543 aa16.38■□□□□ 0.21
TTC9C-201ENST00000294161 TRPM4Q8TD43 1214 aa16.38■□□□□ 0.21
TTC9C-201ENST00000294161 HPS3Q969F9 1004 aa16.38■□□□□ 0.21
TTC9C-201ENST00000294161 TTYH3Q9C0H2 523 aa16.38■□□□□ 0.21
TTC9C-201ENST00000294161 MYOZ2Q9NPC6 264 aa16.38■□□□□ 0.21
TTC9C-201ENST00000294161 ZBTB21Q9ULJ3 1066 aa16.38■□□□□ 0.21
TTC9C-201ENST00000294161 MRPL11Q9Y3B7 192 aaKnown RBP16.38■□□□□ 0.21
TTC9C-201ENST00000294161 H2AFXP16104 143 aaPredicted RBP16.38■□□□□ 0.21
TTC9C-201ENST00000294161 ECM1Q16610 540 aa16.38■□□□□ 0.21
TTC9C-201ENST00000294161 HERC4Q5GLZ8 1057 aaPredicted RBP16.38■□□□□ 0.21
TTC9C-201ENST00000294161 NUCKS1Q9H1E3 243 aaKnown RBP16.38■□□□□ 0.21
TTC9C-201ENST00000294161 GPRC5DQ9NZD1 345 aa16.38■□□□□ 0.21
TTC9C-201ENST00000294161 CDC23Q9UJX2 597 aa16.38■□□□□ 0.21
TTC9C-201ENST00000294161 RABGAP1Q9Y3P9 1069 aa16.38■□□□□ 0.21
TTC9C-201ENST00000294161 COL4A3BPQ9Y5P4 624 aa16.38■□□□□ 0.21
TTC9C-201ENST00000294161 A0A1W2PRG0 241 aa16.37■□□□□ 0.21
TTC9C-201ENST00000294161 POTEB3A0JP26 581 aa16.37■□□□□ 0.21
TTC9C-201ENST00000294161 POTECB2RU33 542 aa16.37■□□□□ 0.21
TTC9C-201ENST00000294161 EIF3CLB5ME19 914 aaKnown RBP16.37■□□□□ 0.21
TTC9C-201ENST00000294161 E9PMD0 336 aa16.37■□□□□ 0.21
TTC9C-201ENST00000294161 POTEB2H3BUK9 544 aa16.37■□□□□ 0.21
TTC9C-201ENST00000294161 GCOM1H8Y6P7 765 aaPredicted RBP16.37■□□□□ 0.21
TTC9C-201ENST00000294161 POLR2MP0CAP2 368 aa16.37■□□□□ 0.21
TTC9C-201ENST00000294161 CCDC40Q4G0X9 1142 aa16.37■□□□□ 0.21
TTC9C-201ENST00000294161 NCAPH2Q6IBW4 605 aa16.37■□□□□ 0.21
TTC9C-201ENST00000294161 FBXO38Q6PIJ6 1188 aa16.37■□□□□ 0.21
TTC9C-201ENST00000294161 POTEBQ6S5H4 581 aa16.37■□□□□ 0.21
TTC9C-201ENST00000294161 KIAA1328Q86T90 577 aa16.37■□□□□ 0.21
TTC9C-201ENST00000294161 RABGGTAQ92696 567 aa16.37■□□□□ 0.21
TTC9C-201ENST00000294161 EIF3CQ99613 913 aaKnown RBP16.37■□□□□ 0.21
TTC9C-201ENST00000294161 CHP1Q99653 195 aa16.37■□□□□ 0.21
TTC9C-201ENST00000294161 POLR3CQ9BUI4 534 aaPredicted RBP16.37■□□□□ 0.21
TTC9C-201ENST00000294161 TSGA10Q9BZW7 698 aa16.37■□□□□ 0.21
TTC9C-201ENST00000294161 DDX41Q9UJV9 622 aaKnown RBP16.37■□□□□ 0.21
TTC9C-201ENST00000294161 FEM1BQ9UK73 627 aa16.37■□□□□ 0.21
TTC9C-201ENST00000294161 TRAF5O00463 557 aa16.36■□□□□ 0.21
TTC9C-201ENST00000294161 KRT86O43790 486 aa16.36■□□□□ 0.21
TTC9C-201ENST00000294161 CYP11B2P19099 503 aa16.36■□□□□ 0.21
TTC9C-201ENST00000294161 RPS12P25398 132 aaKnown RBP16.36■□□□□ 0.21
TTC9C-201ENST00000294161 HNRNPH3P31942 346 aaKnown RBP16.36■□□□□ 0.21
TTC9C-201ENST00000294161 SPA17Q15506 151 aa16.36■□□□□ 0.21
TTC9C-201ENST00000294161 WHAMMP3Q1A5X7 153 aa16.36■□□□□ 0.21
TTC9C-201ENST00000294161 LRRC55Q6ZSA7 311 aa16.36■□□□□ 0.21
TTC9C-201ENST00000294161 FAM184BQ9ULE4 1060 aa16.36■□□□□ 0.21
TTC9C-201ENST00000294161 GLTPD2A6NH11 291 aa16.35■□□□□ 0.21
TTC9C-201ENST00000294161 FANCGO15287 622 aa16.35■□□□□ 0.21
TTC9C-201ENST00000294161 MED24O75448 989 aa16.35■□□□□ 0.21
TTC9C-201ENST00000294161 ARHGAP25P42331 645 aa16.35■□□□□ 0.21
TTC9C-201ENST00000294161 SLC12A3P55017 1021 aa16.35■□□□□ 0.21
TTC9C-201ENST00000294161 ZNF280AP59817 542 aaPredicted RBP16.35■□□□□ 0.21
TTC9C-201ENST00000294161 SNAP25P60880 206 aa16.35■□□□□ 0.21
TTC9C-201ENST00000294161 JAG1P78504 1218 aa16.35■□□□□ 0.21
TTC9C-201ENST00000294161 SPIRE1Q08AE8 756 aa16.35■□□□□ 0.21
TTC9C-201ENST00000294161 ZCWPW2Q504Y3 356 aa16.35■□□□□ 0.21
TTC9C-201ENST00000294161 SRGAP1Q7Z6B7 1085 aa16.35■□□□□ 0.21
TTC9C-201ENST00000294161 SLC35F6Q8N357 371 aa16.35■□□□□ 0.21
TTC9C-201ENST00000294161 SYT2Q8N9I0 419 aaPredicted RBP16.35■□□□□ 0.21
TTC9C-201ENST00000294161 NEK11Q8NG66 645 aa16.35■□□□□ 0.21
TTC9C-201ENST00000294161 CCDC42Q96M95 316 aa16.35■□□□□ 0.21
TTC9C-201ENST00000294161 TANGO6Q9C0B7 1094 aa16.35■□□□□ 0.21
TTC9C-201ENST00000294161 RANBP17Q9H2T7 1088 aaKnown RBP16.35■□□□□ 0.21
TTC9C-201ENST00000294161 VCPKMTQ9H867 229 aa16.35■□□□□ 0.21
TTC9C-201ENST00000294161 VEZTQ9HBM0 779 aa16.35■□□□□ 0.21
TTC9C-201ENST00000294161 FRMD3A2A2Y4 597 aa16.35■□□□□ 0.21
TTC9C-201ENST00000294161 WNT10BO00744 389 aa16.35■□□□□ 0.21
TTC9C-201ENST00000294161 MUTP22033 750 aa16.35■□□□□ 0.21
TTC9C-201ENST00000294161 HIRAP54198 1017 aaPredicted RBP16.35■□□□□ 0.21
TTC9C-201ENST00000294161 RRP1BQ14684 758 aaKnown RBP16.35■□□□□ 0.21
TTC9C-201ENST00000294161 BMS1Q14692 1282 aaKnown RBP16.35■□□□□ 0.21
TTC9C-201ENST00000294161 LRRC41Q15345 812 aa16.35■□□□□ 0.21
TTC9C-201ENST00000294161 EDRF1Q3B7T1 1238 aa16.35■□□□□ 0.21
TTC9C-201ENST00000294161 FAM83BQ5T0W9 1011 aa16.35■□□□□ 0.21
TTC9C-201ENST00000294161 DPY19L2Q6NUT2 758 aa16.35■□□□□ 0.21
TTC9C-201ENST00000294161 WDR59Q6PJI9 974 aa16.35■□□□□ 0.21
TTC9C-201ENST00000294161 CATSPER3Q86XQ3 398 aa16.35■□□□□ 0.21
TTC9C-201ENST00000294161 SPICE1Q8N0Z3 855 aa16.35■□□□□ 0.21
TTC9C-201ENST00000294161 MMRN2Q9H8L6 949 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms