RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 NT5C3AQ9H0P0 336 aa17.5■□□□□ 0.39
NCKIPSD-201ENST00000294129 KIF11P52732 1056 aa17.5■□□□□ 0.39
NCKIPSD-201ENST00000294129 SMC1AQ14683 1233 aaKnown RBP17.5■□□□□ 0.39
NCKIPSD-201ENST00000294129 RBM26Q5T8P6 1007 aaKnown RBP17.5■□□□□ 0.39
NCKIPSD-201ENST00000294129 FUT8Q9BYC5 575 aa17.5■□□□□ 0.39
NCKIPSD-201ENST00000294129 ABCB6Q9NP58 842 aa17.5■□□□□ 0.39
NCKIPSD-201ENST00000294129 KDM3AQ9Y4C1 1321 aa17.5■□□□□ 0.39
NCKIPSD-201ENST00000294129 SLX4Q8IY92 1834 aa17.49■□□□□ 0.39
NCKIPSD-201ENST00000294129 ARFGEF1Q9Y6D6 1849 aa17.49■□□□□ 0.39
NCKIPSD-201ENST00000294129 A0A1W2PRG0 241 aa17.49■□□□□ 0.39
NCKIPSD-201ENST00000294129 EIF3CLB5ME19 914 aaKnown RBP17.49■□□□□ 0.39
NCKIPSD-201ENST00000294129 FAM86B1E9PN63 330 aa17.49■□□□□ 0.39
NCKIPSD-201ENST00000294129 PPIP5K2O43314 1243 aa17.49■□□□□ 0.39
NCKIPSD-201ENST00000294129 FAM86B2P0C5J1 330 aa17.49■□□□□ 0.39
NCKIPSD-201ENST00000294129 DNA2P51530 1060 aa17.49■□□□□ 0.39
NCKIPSD-201ENST00000294129 SYDE2Q5VT97 1194 aa17.49■□□□□ 0.39
NCKIPSD-201ENST00000294129 EIF3CQ99613 913 aaKnown RBP17.49■□□□□ 0.39
NCKIPSD-201ENST00000294129 BCAS3Q9H6U6 928 aa17.49■□□□□ 0.39
NCKIPSD-201ENST00000294129 SCAF8Q9UPN6 1271 aaKnown RBP17.49■□□□□ 0.39
NCKIPSD-201ENST00000294129 COL4A3BPQ9Y5P4 624 aa17.49■□□□□ 0.39
NCKIPSD-201ENST00000294129 CCDC151A5D8V7 595 aa17.49■□□□□ 0.39
NCKIPSD-201ENST00000294129 CHMP2AO43633 222 aa17.49■□□□□ 0.39
NCKIPSD-201ENST00000294129 C21orf2O43822 256 aa17.49■□□□□ 0.39
NCKIPSD-201ENST00000294129 CYP11B2P19099 503 aa17.49■□□□□ 0.39
NCKIPSD-201ENST00000294129 NAP1L1P55209 391 aaKnown RBP17.49■□□□□ 0.39
NCKIPSD-201ENST00000294129 FKBP3Q00688 224 aaKnown RBP17.49■□□□□ 0.39
NCKIPSD-201ENST00000294129 CCDC174Q6PII3 467 aa17.49■□□□□ 0.39
NCKIPSD-201ENST00000294129 CATSPER3Q86XQ3 398 aa17.49■□□□□ 0.39
NCKIPSD-201ENST00000294129 GDAP1L1Q96MZ0 367 aa17.49■□□□□ 0.39
NCKIPSD-201ENST00000294129 PSMD14O00487 310 aa17.49■□□□□ 0.39
NCKIPSD-201ENST00000294129 MOCS3O95396 460 aa17.49■□□□□ 0.39
NCKIPSD-201ENST00000294129 CASP5P51878 434 aa17.49■□□□□ 0.39
NCKIPSD-201ENST00000294129 MRPS25P82663 173 aaKnown RBP17.49■□□□□ 0.39
NCKIPSD-201ENST00000294129 GFPT1Q06210 699 aaPredicted RBP17.49■□□□□ 0.39
NCKIPSD-201ENST00000294129 TRAPPC11Q7Z392 1133 aa17.49■□□□□ 0.39
NCKIPSD-201ENST00000294129 CCDC170Q8IYT3 715 aa17.49■□□□□ 0.39
NCKIPSD-201ENST00000294129 SECISBP2LQ93073 1101 aaKnown RBP17.49■□□□□ 0.39
NCKIPSD-201ENST00000294129 IDI2Q9BXS1 227 aa17.49■□□□□ 0.39
NCKIPSD-201ENST00000294129 KCNMB3Q9NPA1 279 aa17.49■□□□□ 0.39
NCKIPSD-201ENST00000294129 NRXN2Q9P2S2 1712 aa17.49■□□□□ 0.39
NCKIPSD-201ENST00000294129 CAPN6Q9Y6Q1 641 aa17.49■□□□□ 0.39
NCKIPSD-201ENST00000294129 RAD17O75943 681 aa17.48■□□□□ 0.39
NCKIPSD-201ENST00000294129 CFBP00751 764 aa17.48■□□□□ 0.39
NCKIPSD-201ENST00000294129 BMP3P12645 472 aa17.48■□□□□ 0.39
NCKIPSD-201ENST00000294129 EPS15P42566 896 aa17.48■□□□□ 0.39
NCKIPSD-201ENST00000294129 EHHADHQ08426 723 aa17.48■□□□□ 0.39
NCKIPSD-201ENST00000294129 LSM14BQ9BX40 385 aaKnown RBP17.48■□□□□ 0.39
NCKIPSD-201ENST00000294129 PLAGL2Q9UPG8 496 aa17.48■□□□□ 0.39
NCKIPSD-201ENST00000294129 PCDHA13Q9Y5I0 950 aa17.48■□□□□ 0.39
NCKIPSD-201ENST00000294129 CXCR5P32302 372 aa17.48■□□□□ 0.39
NCKIPSD-201ENST00000294129 PSMD2Q13200 908 aa17.48■□□□□ 0.39
NCKIPSD-201ENST00000294129 CCDC84Q86UT8 332 aaPredicted RBP17.48■□□□□ 0.39
NCKIPSD-201ENST00000294129 SCFD1Q8WVM8 642 aa17.48■□□□□ 0.39
NCKIPSD-201ENST00000294129 TBC1D5Q92609 795 aa17.48■□□□□ 0.39
NCKIPSD-201ENST00000294129 MKL1Q969V6 931 aa17.48■□□□□ 0.39
NCKIPSD-201ENST00000294129 EMILIN3Q9NT22 766 aa17.48■□□□□ 0.39
NCKIPSD-201ENST00000294129 RSPH10B2B2RC85 870 aa17.47■□□□□ 0.39
NCKIPSD-201ENST00000294129 RSPH10BP0C881 870 aa17.47■□□□□ 0.39
NCKIPSD-201ENST00000294129 USP11P51784 963 aa17.47■□□□□ 0.39
NCKIPSD-201ENST00000294129 VAV2P52735 878 aa17.47■□□□□ 0.39
NCKIPSD-201ENST00000294129 POLR2FP61218 127 aaKnown RBP17.47■□□□□ 0.39
NCKIPSD-201ENST00000294129 BRD3Q15059 726 aa17.47■□□□□ 0.39
NCKIPSD-201ENST00000294129 COBLL1Q53SF7 1204 aa17.47■□□□□ 0.39
NCKIPSD-201ENST00000294129 ARSHQ5FYA8 562 aa17.47■□□□□ 0.39
NCKIPSD-201ENST00000294129 TATDN1Q6P1N9 297 aa17.47■□□□□ 0.39
NCKIPSD-201ENST00000294129 ACER1Q8TDN7 264 aa17.47■□□□□ 0.39
NCKIPSD-201ENST00000294129 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.47■□□□□ 0.39
NCKIPSD-201ENST00000294129 RGL1Q9NZL6 768 aa17.47■□□□□ 0.39
NCKIPSD-201ENST00000294129 SFI1A8K8P3 1242 aa17.47■□□□□ 0.39
NCKIPSD-201ENST00000294129 KCNMA1Q12791 1236 aa17.47■□□□□ 0.39
NCKIPSD-201ENST00000294129 TUBB2AQ13885 445 aa17.47■□□□□ 0.39
NCKIPSD-201ENST00000294129 TUBB2BQ9BVA1 445 aa17.47■□□□□ 0.39
NCKIPSD-201ENST00000294129 VEZTQ9HBM0 779 aa17.47■□□□□ 0.39
NCKIPSD-201ENST00000294129 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.47■□□□□ 0.39
NCKIPSD-201ENST00000294129 SIPA1L1O43166 1804 aa17.46■□□□□ 0.39
NCKIPSD-201ENST00000294129 A0A1W2PQJ5 194 aa17.46■□□□□ 0.39
NCKIPSD-201ENST00000294129 FAM170AA1A519 330 aa17.46■□□□□ 0.39
NCKIPSD-201ENST00000294129 BUB1O43683 1085 aa17.46■□□□□ 0.39
NCKIPSD-201ENST00000294129 MATR3P43243 847 aaKnown RBP eCLIP17.46■□□□□ 0.39
NCKIPSD-201ENST00000294129 ADAM9Q13443 819 aa17.46■□□□□ 0.39
NCKIPSD-201ENST00000294129 ZBTB12Q9Y330 459 aaPredicted RBP17.46■□□□□ 0.39
NCKIPSD-201ENST00000294129 QSER1Q2KHR3 1735 aa17.46■□□□□ 0.39
NCKIPSD-201ENST00000294129 YDJCA8MPS7 323 aa17.46■□□□□ 0.39
NCKIPSD-201ENST00000294129 TULP1O00294 542 aaPredicted RBP17.46■□□□□ 0.39
NCKIPSD-201ENST00000294129 USO1O60763 962 aaKnown RBP17.46■□□□□ 0.39
NCKIPSD-201ENST00000294129 RASSF7Q02833 373 aa17.46■□□□□ 0.39
NCKIPSD-201ENST00000294129 HAUS3Q68CZ6 603 aa17.46■□□□□ 0.39
NCKIPSD-201ENST00000294129 SFR1Q86XK3 245 aa17.46■□□□□ 0.39
NCKIPSD-201ENST00000294129 CDAN1Q8IWY9 1227 aa17.46■□□□□ 0.39
NCKIPSD-201ENST00000294129 SLFN12Q8IYM2 578 aa17.46■□□□□ 0.39
NCKIPSD-201ENST00000294129 EHBP1Q8NDI1 1231 aa17.46■□□□□ 0.39
NCKIPSD-201ENST00000294129 PIGOQ8TEQ8 1089 aa17.46■□□□□ 0.39
NCKIPSD-201ENST00000294129 BHMT2Q9H2M3 363 aa17.46■□□□□ 0.39
NCKIPSD-201ENST00000294129 PDE11AQ9HCR9 933 aa17.46■□□□□ 0.39
NCKIPSD-201ENST00000294129 SMARCAL1Q9NZC9 954 aa17.46■□□□□ 0.39
NCKIPSD-201ENST00000294129 SERPINA10Q9UK55 444 aa17.46■□□□□ 0.39
NCKIPSD-201ENST00000294129 PRR12Q9ULL5 1215 aa17.46■□□□□ 0.39
NCKIPSD-201ENST00000294129 PRPF6O94906 941 aaKnown RBP17.46■□□□□ 0.38
NCKIPSD-201ENST00000294129 FIGNQ5HY92 759 aa17.46■□□□□ 0.38
NCKIPSD-201ENST00000294129 BEND6Q5SZJ8 279 aaPredicted RBP17.46■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms