RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 FBXO33Q7Z6M2 555 aa16.16■□□□□ 0.18
CCNF-201ENST00000293968 GIMAP7Q8NHV1 300 aa16.16■□□□□ 0.18
CCNF-201ENST00000293968 ZMYND12Q9H0C1 365 aa16.16■□□□□ 0.18
CCNF-201ENST00000293968 TIAM2Q8IVF5 1701 aa16.16■□□□□ 0.18
CCNF-201ENST00000293968 USP17L5A8MUK1 530 aa16.16■□□□□ 0.18
CCNF-201ENST00000293968 SKOR1P84550 965 aa16.16■□□□□ 0.18
CCNF-201ENST00000293968 SBK1Q52WX2 424 aa16.16■□□□□ 0.18
CCNF-201ENST00000293968 ATP6V0A2Q9Y487 856 aa16.16■□□□□ 0.18
CCNF-201ENST00000293968 EPB41P11171 864 aaKnown RBP16.15■□□□□ 0.18
CCNF-201ENST00000293968 ADCY7P51828 1080 aa16.15■□□□□ 0.18
CCNF-201ENST00000293968 ACTN3Q08043 901 aaPredicted RBP16.15■□□□□ 0.18
CCNF-201ENST00000293968 KCNMA1Q12791 1236 aa16.15■□□□□ 0.18
CCNF-201ENST00000293968 KDM7AQ6ZMT4 941 aa16.15■□□□□ 0.18
CCNF-201ENST00000293968 RAD54LQ92698 747 aa16.15■□□□□ 0.18
CCNF-201ENST00000293968 CEP72Q9P209 647 aa16.15■□□□□ 0.18
CCNF-201ENST00000293968 KRIT1O00522 736 aa16.15■□□□□ 0.18
CCNF-201ENST00000293968 HNRNPH3P31942 346 aaKnown RBP16.15■□□□□ 0.18
CCNF-201ENST00000293968 COASYQ13057 564 aa16.15■□□□□ 0.18
CCNF-201ENST00000293968 KCNV1Q6PIU1 500 aa16.15■□□□□ 0.18
CCNF-201ENST00000293968 SUGP1Q8IWZ8 645 aaKnown RBP16.15■□□□□ 0.18
CCNF-201ENST00000293968 MYCBPAPQ8TBZ2 947 aa16.15■□□□□ 0.18
CCNF-201ENST00000293968 PNMA5Q96PV4 448 aa16.15■□□□□ 0.18
CCNF-201ENST00000293968 MYH10P35580 1976 aa16.15■□□□□ 0.18
CCNF-201ENST00000293968 TLDC2A0PJX2 215 aa16.15■□□□□ 0.18
CCNF-201ENST00000293968 M0R2N6 131 aa16.15■□□□□ 0.18
CCNF-201ENST00000293968 PICALMQ13492 652 aa16.15■□□□□ 0.18
CCNF-201ENST00000293968 DDB1Q16531 1140 aa16.15■□□□□ 0.18
CCNF-201ENST00000293968 KRT71Q3SY84 523 aa16.15■□□□□ 0.18
CCNF-201ENST00000293968 CPLX4Q7Z7G2 160 aa16.15■□□□□ 0.18
CCNF-201ENST00000293968 ARFGAP2Q8N6H7 521 aa16.15■□□□□ 0.18
CCNF-201ENST00000293968 WHAMMQ8TF30 809 aa16.15■□□□□ 0.18
CCNF-201ENST00000293968 ZNF287Q9HBT7 754 aa16.15■□□□□ 0.18
CCNF-201ENST00000293968 STK17AQ9UEE5 414 aa16.15■□□□□ 0.18
CCNF-201ENST00000293968 ADAM9Q13443 819 aa16.14■□□□□ 0.17
CCNF-201ENST00000293968 DAGLBQ8NCG7 672 aa16.14■□□□□ 0.17
CCNF-201ENST00000293968 GDF3Q9NR23 364 aa16.14■□□□□ 0.17
CCNF-201ENST00000293968 NOVA2Q9UNW9 492 aaKnown RBP16.14■□□□□ 0.17
CCNF-201ENST00000293968 PVALEFA0A1B0GWK0 134 aa16.14■□□□□ 0.17
CCNF-201ENST00000293968 E9PMD0 336 aa16.14■□□□□ 0.17
CCNF-201ENST00000293968 NAB2Q15742 525 aa16.14■□□□□ 0.17
CCNF-201ENST00000293968 IQCKQ8N0W5 287 aa16.14■□□□□ 0.17
CCNF-201ENST00000293968 KIAA1024Q9UPX6 916 aa16.14■□□□□ 0.17
CCNF-201ENST00000293968 SSU72P8A0A1W2PR75 194 aa16.14■□□□□ 0.17
CCNF-201ENST00000293968 PALM3A6NDB9 673 aaPredicted RBP16.14■□□□□ 0.17
CCNF-201ENST00000293968 TLR2O60603 784 aa16.14■□□□□ 0.17
CCNF-201ENST00000293968 TEX11Q8IYF3 940 aa16.14■□□□□ 0.17
CCNF-201ENST00000293968 RUBCNQ92622 972 aa16.14■□□□□ 0.17
CCNF-201ENST00000293968 LZTS2Q9BRK4 669 aa16.14■□□□□ 0.17
CCNF-201ENST00000293968 RNF14Q9UBS8 474 aa16.14■□□□□ 0.17
CCNF-201ENST00000293968 HMGB1P1B2RPK0 211 aaPredicted RBP16.13■□□□□ 0.17
CCNF-201ENST00000293968 CDC37Q16543 378 aaPredicted RBP16.13■□□□□ 0.17
CCNF-201ENST00000293968 HGSNATQ68CP4 663 aa16.13■□□□□ 0.17
CCNF-201ENST00000293968 CLEC10AQ8IUN9 316 aa16.13■□□□□ 0.17
CCNF-201ENST00000293968 TAF1DQ9H5J8 278 aaPredicted RBP16.13■□□□□ 0.17
CCNF-201ENST00000293968 SLC18A3Q16572 532 aa16.13■□□□□ 0.17
CCNF-201ENST00000293968 LRRC55Q6ZSA7 311 aa16.13■□□□□ 0.17
CCNF-201ENST00000293968 PEX26Q7Z412 305 aa16.13■□□□□ 0.17
CCNF-201ENST00000293968 SLC51AQ86UW1 340 aa16.13■□□□□ 0.17
CCNF-201ENST00000293968 GPBP1Q86WP2 473 aa16.13■□□□□ 0.17
CCNF-201ENST00000293968 CEP95Q96GE4 821 aa16.13■□□□□ 0.17
CCNF-201ENST00000293968 ADAMTSL3P82987 1691 aa16.13■□□□□ 0.17
CCNF-201ENST00000293968 CDK8P49336 464 aa16.13■□□□□ 0.17
CCNF-201ENST00000293968 LRRC27Q9C0I9 530 aa16.13■□□□□ 0.17
CCNF-201ENST00000293968 CCDC113Q9H0I3 377 aa16.13■□□□□ 0.17
CCNF-201ENST00000293968 RIC8AQ9NPQ8 531 aa16.13■□□□□ 0.17
CCNF-201ENST00000293968 PARP4Q9UKK3 1724 aaKnown RBP16.13■□□□□ 0.17
CCNF-201ENST00000293968 PJA2O43164 708 aa16.12■□□□□ 0.17
CCNF-201ENST00000293968 RASA1P20936 1047 aa16.12■□□□□ 0.17
CCNF-201ENST00000293968 HSD17B3P37058 310 aa16.12■□□□□ 0.17
CCNF-201ENST00000293968 USP38Q8NB14 1042 aa16.12■□□□□ 0.17
CCNF-201ENST00000293968 LRRC45Q96CN5 670 aa16.12■□□□□ 0.17
CCNF-201ENST00000293968 SETDB2Q96T68 719 aa16.12■□□□□ 0.17
CCNF-201ENST00000293968 FGFBP2Q9BYJ0 223 aa16.12■□□□□ 0.17
CCNF-201ENST00000293968 ANKRD2Q9GZV1 360 aa16.12■□□□□ 0.17
CCNF-201ENST00000293968 AMACRQ9UHK6 382 aa16.12■□□□□ 0.17
CCNF-201ENST00000293968 GRID2IPA4D2P6 1211 aa16.12■□□□□ 0.17
CCNF-201ENST00000293968 ERVK-9P63128 1117 aa16.12■□□□□ 0.17
CCNF-201ENST00000293968 GRIK5Q16478 980 aa16.12■□□□□ 0.17
CCNF-201ENST00000293968 CCDC65Q8IXS2 484 aa16.12■□□□□ 0.17
CCNF-201ENST00000293968 CEP89Q96ST8 783 aa16.12■□□□□ 0.17
CCNF-201ENST00000293968 SELENOSQ9BQE4 189 aa16.12■□□□□ 0.17
CCNF-201ENST00000293968 NUCKS1Q9H1E3 243 aaKnown RBP16.12■□□□□ 0.17
CCNF-201ENST00000293968 DDX25Q9UHL0 483 aaKnown RBP16.12■□□□□ 0.17
CCNF-201ENST00000293968 FBXL5Q9UKA1 691 aa16.12■□□□□ 0.17
CCNF-201ENST00000293968 DAPK3O43293 454 aa16.12■□□□□ 0.17
CCNF-201ENST00000293968 DAAM2Q86T65 1068 aa16.12■□□□□ 0.17
CCNF-201ENST00000293968 UHMK1Q8TAS1 419 aaKnown RBP16.12■□□□□ 0.17
CCNF-201ENST00000293968 PCDHA12Q9UN75 941 aa16.12■□□□□ 0.17
CCNF-201ENST00000293968 MPHOSPH10O00566 681 aaKnown RBP16.11■□□□□ 0.17
CCNF-201ENST00000293968 CETN3O15182 167 aa16.11■□□□□ 0.17
CCNF-201ENST00000293968 NR2F2P24468 414 aa16.11■□□□□ 0.17
CCNF-201ENST00000293968 BTDP43251 543 aa16.11■□□□□ 0.17
CCNF-201ENST00000293968 SEMA3FQ13275 785 aa16.11■□□□□ 0.17
CCNF-201ENST00000293968 TBC1D9BQ66K14 1250 aa16.11■□□□□ 0.17
CCNF-201ENST00000293968 SPATS2Q86XZ4 545 aaKnown RBP16.11■□□□□ 0.17
CCNF-201ENST00000293968 CYFIP2Q96F07 1278 aa16.11■□□□□ 0.17
CCNF-201ENST00000293968 SRP68Q9UHB9 627 aaKnown RBP16.11■□□□□ 0.17
CCNF-201ENST00000293968 UBR2Q8IWV8 1755 aa16.11■□□□□ 0.17
CCNF-201ENST00000293968 SLC16A2P36021 539 aa16.11■□□□□ 0.17
CCNF-201ENST00000293968 PTK2Q05397 1052 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms