RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 RAB34Q9BZG1 259 aa11.44□□□□□ -0.58
SKA1-201ENST00000285116 STIM2Q9P246 746 aa11.44□□□□□ -0.58
SKA1-201ENST00000285116 GGA2Q9UJY4 613 aa11.44□□□□□ -0.58
SKA1-201ENST00000285116 SPATA31A6Q5VVP1 1343 aa11.43□□□□□ -0.58
SKA1-201ENST00000285116 USP17L3A6NCW0 530 aa11.43□□□□□ -0.58
SKA1-201ENST00000285116 USP17L4A6NCW7 530 aa11.43□□□□□ -0.58
SKA1-201ENST00000285116 MYMKA6NI61 221 aa11.43□□□□□ -0.58
SKA1-201ENST00000285116 SRRM3A6NNA2 597 aaPredicted RBP11.43□□□□□ -0.58
SKA1-201ENST00000285116 EIF4A3P38919 411 aaKnown RBP11.43□□□□□ -0.58
SKA1-201ENST00000285116 NAP1L1P55209 391 aaKnown RBP11.43□□□□□ -0.58
SKA1-201ENST00000285116 KDM7AQ6ZMT4 941 aa11.43□□□□□ -0.58
SKA1-201ENST00000285116 USP17L1Q7RTZ2 530 aa11.43□□□□□ -0.58
SKA1-201ENST00000285116 RAD54LQ92698 747 aa11.43□□□□□ -0.58
SKA1-201ENST00000285116 ZKSCAN4Q969J2 545 aaPredicted RBP11.43□□□□□ -0.58
SKA1-201ENST00000285116 FAM163AQ96GL9 167 aaPredicted RBP11.43□□□□□ -0.58
SKA1-201ENST00000285116 CEP63Q96MT8 703 aa11.43□□□□□ -0.58
SKA1-201ENST00000285116 RTFDC1Q9BY42 306 aaPredicted RBP11.43□□□□□ -0.58
SKA1-201ENST00000285116 EPN3Q9H201 632 aa11.43□□□□□ -0.58
SKA1-201ENST00000285116 CEP72Q9P209 647 aa11.43□□□□□ -0.58
SKA1-201ENST00000285116 DMGDHQ9UI17 866 aaKnown RBP11.43□□□□□ -0.58
SKA1-201ENST00000285116 MYH10P35580 1976 aa11.43□□□□□ -0.58
SKA1-201ENST00000285116 MACROD2A1Z1Q3 448 aa11.43□□□□□ -0.58
SKA1-201ENST00000285116 SMTNP53814 917 aa11.43□□□□□ -0.58
SKA1-201ENST00000285116 CYP27A1Q02318 531 aa11.43□□□□□ -0.58
SKA1-201ENST00000285116 HGSNATQ68CP4 663 aa11.43□□□□□ -0.58
SKA1-201ENST00000285116 HAUS3Q68CZ6 603 aa11.43□□□□□ -0.58
SKA1-201ENST00000285116 PPP4R3AQ6IN85 833 aa11.43□□□□□ -0.58
SKA1-201ENST00000285116 CD302Q8IX05 232 aa11.43□□□□□ -0.58
SKA1-201ENST00000285116 REXO1Q8N1G1 1221 aaKnown RBP11.43□□□□□ -0.58
SKA1-201ENST00000285116 TSEN2Q8NCE0 465 aaKnown RBP11.43□□□□□ -0.58
SKA1-201ENST00000285116 HDAC7Q8WUI4 952 aa11.43□□□□□ -0.58
SKA1-201ENST00000285116 LARP4BQ92615 738 aaKnown RBP11.43□□□□□ -0.58
SKA1-201ENST00000285116 DYNLL2Q96FJ2 89 aa11.43□□□□□ -0.58
SKA1-201ENST00000285116 VCPKMTQ9H867 229 aa11.43□□□□□ -0.58
SKA1-201ENST00000285116 GDF3Q9NR23 364 aa11.43□□□□□ -0.58
SKA1-201ENST00000285116 LTBP1Q14766 1721 aa11.43□□□□□ -0.58
SKA1-201ENST00000285116 GNA14O95837 355 aa11.42□□□□□ -0.58
SKA1-201ENST00000285116 PLCG2P16885 1265 aa11.42□□□□□ -0.58
SKA1-201ENST00000285116 LSP1P33241 339 aa11.42□□□□□ -0.58
SKA1-201ENST00000285116 TMEM266Q2M3C6 531 aa11.42□□□□□ -0.58
SKA1-201ENST00000285116 LETM2Q2VYF4 491 aa11.42□□□□□ -0.58
SKA1-201ENST00000285116 PREPLQ4J6C6 727 aaPredicted RBP11.42□□□□□ -0.58
SKA1-201ENST00000285116 SOGA3Q5TF21 947 aa11.42□□□□□ -0.58
SKA1-201ENST00000285116 NAA35Q5VZE5 725 aa11.42□□□□□ -0.58
SKA1-201ENST00000285116 C2CD5Q86YS7 1000 aa11.42□□□□□ -0.58
SKA1-201ENST00000285116 TBCKQ8TEA7 893 aa11.42□□□□□ -0.58
SKA1-201ENST00000285116 NOX5Q96PH1 765 aa11.42□□□□□ -0.58
SKA1-201ENST00000285116 TSG101Q99816 390 aa11.42□□□□□ -0.58
SKA1-201ENST00000285116 SEC63Q9UGP8 760 aaKnown RBP11.42□□□□□ -0.58
SKA1-201ENST00000285116 MCM8Q9UJA3 840 aa11.42□□□□□ -0.58
SKA1-201ENST00000285116 BTAF1O14981 1849 aa11.42□□□□□ -0.58
SKA1-201ENST00000285116 GPR75-ASB3A0A0A6YYF3 556 aa11.42□□□□□ -0.58
SKA1-201ENST00000285116 TMCO5BA8MYB1 307 aa11.42□□□□□ -0.58
SKA1-201ENST00000285116 PLEKP08567 350 aaPredicted RBP11.42□□□□□ -0.58
SKA1-201ENST00000285116 SNHG28P0DPA3 235 aa11.42□□□□□ -0.58
SKA1-201ENST00000285116 ACTN3Q08043 901 aaPredicted RBP11.42□□□□□ -0.58
SKA1-201ENST00000285116 DRP2Q13474 957 aa11.42□□□□□ -0.58
SKA1-201ENST00000285116 PCMTD1Q96MG8 357 aaPredicted RBP11.42□□□□□ -0.58
SKA1-201ENST00000285116 TLR10Q9BXR5 811 aa11.42□□□□□ -0.58
SKA1-201ENST00000285116 LUC7LQ9NQ29 371 aaKnown RBP11.42□□□□□ -0.58
SKA1-201ENST00000285116 KLC4Q9NSK0 619 aa11.42□□□□□ -0.58
SKA1-201ENST00000285116 LRRC53A6NM62 1247 aa11.42□□□□□ -0.58
SKA1-201ENST00000285116 EPHB6O15197 1021 aa11.42□□□□□ -0.58
SKA1-201ENST00000285116 SERPING1P05155 500 aa11.42□□□□□ -0.58
SKA1-201ENST00000285116 ELF1P32519 619 aa11.42□□□□□ -0.58
SKA1-201ENST00000285116 RFC4P35249 363 aa11.42□□□□□ -0.58
SKA1-201ENST00000285116 TECP42680 631 aa11.42□□□□□ -0.58
SKA1-201ENST00000285116 PAFAH1B1P43034 410 aa11.42□□□□□ -0.58
SKA1-201ENST00000285116 KLHDC7AQ5VTJ3 777 aa11.42□□□□□ -0.58
SKA1-201ENST00000285116 ZNF473Q8WTR7 871 aaKnown RBP11.42□□□□□ -0.58
SKA1-201ENST00000285116 ZIM3Q96PE6 472 aa11.42□□□□□ -0.58
SKA1-201ENST00000285116 NAP1L4Q99733 375 aaKnown RBP11.42□□□□□ -0.58
SKA1-201ENST00000285116 PCDHGC5Q9Y5F6 944 aa11.42□□□□□ -0.58
SKA1-201ENST00000285116 MYO3BQ8WXR4 1341 aa11.41□□□□□ -0.58
SKA1-201ENST00000285116 EDIL3O43854 480 aa11.41□□□□□ -0.58
SKA1-201ENST00000285116 RPS6KA4O75676 772 aa11.41□□□□□ -0.58
SKA1-201ENST00000285116 MOCS3O95396 460 aa11.41□□□□□ -0.58
SKA1-201ENST00000285116 ANXA13P27216 316 aa11.41□□□□□ -0.58
SKA1-201ENST00000285116 MAGEA1P43355 309 aa11.41□□□□□ -0.58
SKA1-201ENST00000285116 CDK8P49336 464 aa11.41□□□□□ -0.58
SKA1-201ENST00000285116 CALCRLQ16602 461 aa11.41□□□□□ -0.58
SKA1-201ENST00000285116 CCDC40Q4G0X9 1142 aa11.41□□□□□ -0.58
SKA1-201ENST00000285116 ASPRV1Q53RT3 343 aa11.41□□□□□ -0.58
SKA1-201ENST00000285116 KRT26Q7Z3Y9 468 aa11.41□□□□□ -0.58
SKA1-201ENST00000285116 TXNRD3Q86VQ6 643 aa11.41□□□□□ -0.58
SKA1-201ENST00000285116 EYA3Q99504 573 aa11.41□□□□□ -0.58
SKA1-201ENST00000285116 PLIN2Q99541 437 aa11.41□□□□□ -0.58
SKA1-201ENST00000285116 MLXIPQ9HAP2 919 aa11.41□□□□□ -0.58
SKA1-201ENST00000285116 CD248Q9HCU0 757 aa11.41□□□□□ -0.58
SKA1-201ENST00000285116 BHMG1C9JSJ3 638 aaPredicted RBP11.41□□□□□ -0.58
SKA1-201ENST00000285116 AKR1B10O60218 316 aa11.41□□□□□ -0.58
SKA1-201ENST00000285116 PPP1R37O75864 691 aa11.41□□□□□ -0.58
SKA1-201ENST00000285116 RASSF9O75901 435 aa11.41□□□□□ -0.58
SKA1-201ENST00000285116 NF2P35240 595 aa11.41□□□□□ -0.58
SKA1-201ENST00000285116 ATP1A2P50993 1020 aa11.41□□□□□ -0.58
SKA1-201ENST00000285116 NAB2Q15742 525 aa11.41□□□□□ -0.58
SKA1-201ENST00000285116 CFAP221Q4G0U5 840 aa11.41□□□□□ -0.58
SKA1-201ENST00000285116 C10orf76Q5T2E6 689 aa11.41□□□□□ -0.58
SKA1-201ENST00000285116 WLSQ5T9L3 541 aa11.41□□□□□ -0.58
SKA1-201ENST00000285116 TPTE2Q6XPS3 522 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms