RNA–Protein interactions for RNA: ENST00000284551.10

TRIM11-201, Transcript of tripartite motif containing 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM11, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-201ENST00000284551 NOL4O94818 638 aa18.4■□□□□ 0.54
TRIM11-201ENST00000284551 HERC4Q5GLZ8 1057 aaPredicted RBP18.4■□□□□ 0.54
TRIM11-201ENST00000284551 SAMD1Q6SPF0 538 aaPredicted RBP18.4■□□□□ 0.54
TRIM11-201ENST00000284551 SCFD1Q8WVM8 642 aa18.4■□□□□ 0.54
TRIM11-201ENST00000284551 TDRD3Q9H7E2 651 aaKnown RBP18.4■□□□□ 0.54
TRIM11-201ENST00000284551 VPS18Q9P253 973 aa18.4■□□□□ 0.54
TRIM11-201ENST00000284551 SWAP70Q9UH65 585 aa18.4■□□□□ 0.54
TRIM11-201ENST00000284551 PCDHA2Q9Y5H9 948 aa18.4■□□□□ 0.54
TRIM11-201ENST00000284551 NRXN2Q9P2S2 1712 aa18.4■□□□□ 0.54
TRIM11-201ENST00000284551 RSPH10B2B2RC85 870 aa18.4■□□□□ 0.54
TRIM11-201ENST00000284551 FAM86B1E9PN63 330 aa18.4■□□□□ 0.54
TRIM11-201ENST00000284551 FAM86B2P0C5J1 330 aa18.4■□□□□ 0.54
TRIM11-201ENST00000284551 RSPH10BP0C881 870 aa18.4■□□□□ 0.54
TRIM11-201ENST00000284551 CYP11B2P19099 503 aa18.4■□□□□ 0.54
TRIM11-201ENST00000284551 CHRNA5P30532 468 aa18.4■□□□□ 0.54
TRIM11-201ENST00000284551 RASSF7Q02833 373 aa18.4■□□□□ 0.54
TRIM11-201ENST00000284551 PABPC4Q13310 644 aaKnown RBP eCLIP18.4■□□□□ 0.548e-7■□□□□ 8.3
TRIM11-201ENST00000284551 RETREG2Q8NC44 543 aa18.4■□□□□ 0.54
TRIM11-201ENST00000284551 PURBQ96QR8 312 aaKnown RBP18.4■□□□□ 0.54
TRIM11-201ENST00000284551 RAB34Q9BZG1 259 aa18.4■□□□□ 0.54
TRIM11-201ENST00000284551 COL11A2P13942 1736 aaPredicted RBP18.39■□□□□ 0.54
TRIM11-201ENST00000284551 ATP8B1O43520 1251 aa18.39■□□□□ 0.53
TRIM11-201ENST00000284551 AKR1B10O60218 316 aa18.39■□□□□ 0.53
TRIM11-201ENST00000284551 USP14P54578 494 aa18.39■□□□□ 0.53
TRIM11-201ENST00000284551 KIF5AQ12840 1032 aa18.39■□□□□ 0.53
TRIM11-201ENST00000284551 IKQ13123 557 aaPredicted RBP18.39■□□□□ 0.53
TRIM11-201ENST00000284551 CCDC40Q4G0X9 1142 aa18.39■□□□□ 0.53
TRIM11-201ENST00000284551 KRT27Q7Z3Y8 459 aa18.39■□□□□ 0.53
TRIM11-201ENST00000284551 TBC1D5Q92609 795 aa18.39■□□□□ 0.53
TRIM11-201ENST00000284551 SECISBP2LQ93073 1101 aaKnown RBP18.39■□□□□ 0.53
TRIM11-201ENST00000284551 DEF6Q9H4E7 631 aa18.39■□□□□ 0.53
TRIM11-201ENST00000284551 FAN1Q9Y2M0 1017 aa18.39■□□□□ 0.53
TRIM11-201ENST00000284551 hCG_1984214I3L0E3 225 aa18.39■□□□□ 0.53
TRIM11-201ENST00000284551 ACTN1P12814 892 aa18.39■□□□□ 0.53
TRIM11-201ENST00000284551 PTPROQ16827 1216 aa18.39■□□□□ 0.53
TRIM11-201ENST00000284551 COBLL1Q53SF7 1204 aa18.39■□□□□ 0.53
TRIM11-201ENST00000284551 SLC27A3Q5K4L6 730 aa18.39■□□□□ 0.53
TRIM11-201ENST00000284551 GPATCH4Q5T3I0 446 aaKnown RBP18.39■□□□□ 0.53
TRIM11-201ENST00000284551 ZNF713Q8N859 430 aaPredicted RBP18.39■□□□□ 0.53
TRIM11-201ENST00000284551 CAGE1Q8TC20 777 aa18.39■□□□□ 0.53
TRIM11-201ENST00000284551 BRWD3Q6RI45 1802 aa18.39■□□□□ 0.53
TRIM11-201ENST00000284551 A0A1W2PQJ5 194 aa18.38■□□□□ 0.53
TRIM11-201ENST00000284551 IPO7O95373 1038 aaKnown RBP18.38■□□□□ 0.53
TRIM11-201ENST00000284551 KCNA1Q09470 495 aa18.38■□□□□ 0.53
TRIM11-201ENST00000284551 SPA17Q15506 151 aa18.38■□□□□ 0.53
TRIM11-201ENST00000284551 HGSNATQ68CP4 663 aa18.38■□□□□ 0.53
TRIM11-201ENST00000284551 HHIPL2Q6UWX4 724 aa18.38■□□□□ 0.53
TRIM11-201ENST00000284551 CATSPER3Q86XQ3 398 aa18.38■□□□□ 0.53
TRIM11-201ENST00000284551 CCDC170Q8IYT3 715 aa18.38■□□□□ 0.53
TRIM11-201ENST00000284551 HNRNPLLQ8WVV9 542 aaKnown RBP18.38■□□□□ 0.53
TRIM11-201ENST00000284551 ADAM21Q9UKJ8 722 aa18.38■□□□□ 0.53
TRIM11-201ENST00000284551 A0A1W2PRG0 241 aa18.38■□□□□ 0.53
TRIM11-201ENST00000284551 SFI1A8K8P3 1242 aa18.38■□□□□ 0.53
TRIM11-201ENST00000284551 F5H6K3 240 aa18.38■□□□□ 0.53
TRIM11-201ENST00000284551 ZBTB39O15060 712 aa18.38■□□□□ 0.53
TRIM11-201ENST00000284551 NPR1P16066 1061 aa18.38■□□□□ 0.53
TRIM11-201ENST00000284551 POLR2FP61218 127 aaKnown RBP18.38■□□□□ 0.53
TRIM11-201ENST00000284551 UBXN2AP68543 259 aa18.38■□□□□ 0.53
TRIM11-201ENST00000284551 SLC7A5Q01650 507 aa18.38■□□□□ 0.53
TRIM11-201ENST00000284551 KLRC3Q07444 240 aa18.38■□□□□ 0.53
TRIM11-201ENST00000284551 TDRD12Q587J7 1177 aaKnown RBP18.38■□□□□ 0.53
TRIM11-201ENST00000284551 KIAA1755Q5JYT7 1200 aa18.38■□□□□ 0.53
TRIM11-201ENST00000284551 LSM14BQ9BX40 385 aaKnown RBP18.38■□□□□ 0.53
TRIM11-201ENST00000284551 TRIM34Q9BYJ4 488 aa18.38■□□□□ 0.53
TRIM11-201ENST00000284551 SH2D4AQ9H788 454 aa18.38■□□□□ 0.53
TRIM11-201ENST00000284551 KCNMB3Q9NPA1 279 aa18.38■□□□□ 0.53
TRIM11-201ENST00000284551 OPLAHO14841 1288 aa18.37■□□□□ 0.53
TRIM11-201ENST00000284551 ICA1Q05084 483 aa18.37■□□□□ 0.53
TRIM11-201ENST00000284551 FIGNQ5HY92 759 aa18.37■□□□□ 0.53
TRIM11-201ENST00000284551 HDXQ7Z353 690 aa18.37■□□□□ 0.53
TRIM11-201ENST00000284551 CACNA2D4Q7Z3S7 1137 aa18.37■□□□□ 0.53
TRIM11-201ENST00000284551 MS4A14Q96JA4 679 aa18.37■□□□□ 0.53
TRIM11-201ENST00000284551 GREB1LQ9C091 1923 aaPredicted RBP18.37■□□□□ 0.53
TRIM11-201ENST00000284551 SCAF8Q9UPN6 1271 aaKnown RBP18.37■□□□□ 0.53
TRIM11-201ENST00000284551 COL4A3BPQ9Y5P4 624 aa18.37■□□□□ 0.53
TRIM11-201ENST00000284551 NDUFB10O96000 172 aa18.37■□□□□ 0.53
TRIM11-201ENST00000284551 ECE1P42892 770 aa18.37■□□□□ 0.53
TRIM11-201ENST00000284551 ARHGAP4P98171 946 aa18.37■□□□□ 0.53
TRIM11-201ENST00000284551 LRRC63Q05C16 580 aa18.37■□□□□ 0.53
TRIM11-201ENST00000284551 SPIRE1Q08AE8 756 aa18.37■□□□□ 0.53
TRIM11-201ENST00000284551 PDXDC1Q6P996 788 aa18.37■□□□□ 0.53
TRIM11-201ENST00000284551 CREG2Q8IUH2 290 aa18.37■□□□□ 0.53
TRIM11-201ENST00000284551 PACSIN1Q9BY11 444 aa18.37■□□□□ 0.53
TRIM11-201ENST00000284551 PACSIN2Q9UNF0 486 aaPredicted RBP18.37■□□□□ 0.53
TRIM11-201ENST00000284551 GH2P01242 217 aa18.36■□□□□ 0.53
TRIM11-201ENST00000284551 TNNT3P45378 269 aaPredicted RBP18.36■□□□□ 0.53
TRIM11-201ENST00000284551 ORC2Q13416 577 aaPredicted RBP18.36■□□□□ 0.53
TRIM11-201ENST00000284551 AOC3Q16853 763 aa18.36■□□□□ 0.53
TRIM11-201ENST00000284551 CDAN1Q8IWY9 1227 aa18.36■□□□□ 0.53
TRIM11-201ENST00000284551 CCDC102AQ96A19 550 aa18.36■□□□□ 0.53
TRIM11-201ENST00000284551 LENG9Q96B70 501 aa18.36■□□□□ 0.53
TRIM11-201ENST00000284551 ZDHHC15Q96MV8 337 aa18.36■□□□□ 0.53
TRIM11-201ENST00000284551 RGL1Q9NZL6 768 aa18.36■□□□□ 0.53
TRIM11-201ENST00000284551 ECE2O60344 883 aa18.36■□□□□ 0.53
TRIM11-201ENST00000284551 KRT18P05783 430 aaKnown RBP18.36■□□□□ 0.53
TRIM11-201ENST00000284551 HNRNPH3P31942 346 aaKnown RBP18.36■□□□□ 0.53
TRIM11-201ENST00000284551 HOXD13P35453 343 aa18.36■□□□□ 0.53
TRIM11-201ENST00000284551 MAGEA1P43355 309 aa18.36■□□□□ 0.53
TRIM11-201ENST00000284551 DACT2Q5SW24 774 aa18.36■□□□□ 0.53
TRIM11-201ENST00000284551 KCTD10Q9H3F6 313 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms