RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 PNMA3Q9UL41 463 aa17.21■□□□□ 0.35
COPS3-201ENST00000268717 RHOBTB3O94955 611 aa17.21■□□□□ 0.35
COPS3-201ENST00000268717 ZNF76P36508 570 aa17.21■□□□□ 0.35
COPS3-201ENST00000268717 RLFQ13129 1914 aa17.21■□□□□ 0.35
COPS3-201ENST00000268717 CEP55Q53EZ4 464 aa17.21■□□□□ 0.35
COPS3-201ENST00000268717 SV2BQ7L1I2 683 aa17.21■□□□□ 0.35
COPS3-201ENST00000268717 ERMNQ8TAM6 284 aa17.21■□□□□ 0.35
COPS3-201ENST00000268717 LARP4BQ92615 738 aaKnown RBP17.21■□□□□ 0.35
COPS3-201ENST00000268717 CCDC47Q96A33 483 aaKnown RBP17.21■□□□□ 0.35
COPS3-201ENST00000268717 TRIM9Q9C026 710 aa17.21■□□□□ 0.35
COPS3-201ENST00000268717 NFIBO00712 420 aa17.2■□□□□ 0.34
COPS3-201ENST00000268717 MSH4O15457 936 aa17.2■□□□□ 0.34
COPS3-201ENST00000268717 ALAS1P13196 640 aa17.2■□□□□ 0.34
COPS3-201ENST00000268717 PPP1R2P41236 205 aa17.2■□□□□ 0.34
COPS3-201ENST00000268717 PABPC4Q13310 644 aaKnown RBP eCLIP17.2■□□□□ 0.344e-7■■■□□ 17.3
COPS3-201ENST00000268717 SMCR8Q8TEV9 937 aaPredicted RBP17.2■□□□□ 0.34
COPS3-201ENST00000268717 RAD54LQ92698 747 aa17.2■□□□□ 0.34
COPS3-201ENST00000268717 ARHGAP39Q9C0H5 1083 aa17.2■□□□□ 0.34
COPS3-201ENST00000268717 HSD3B7Q9H2F3 369 aa17.2■□□□□ 0.34
COPS3-201ENST00000268717 BLZF1Q9H2G9 400 aa17.2■□□□□ 0.34
COPS3-201ENST00000268717 BLOC1S4Q9NUP1 217 aa17.2■□□□□ 0.34
COPS3-201ENST00000268717 CCDC85CA6NKD9 419 aa17.19■□□□□ 0.34
COPS3-201ENST00000268717 MEIS1O00470 390 aa17.19■□□□□ 0.34
COPS3-201ENST00000268717 KLRC4O43908 158 aa17.19■□□□□ 0.34
COPS3-201ENST00000268717 PTMAP06454 111 aaKnown RBP17.19■□□□□ 0.34
COPS3-201ENST00000268717 CASP1P29466 404 aa17.19■□□□□ 0.34
COPS3-201ENST00000268717 KIF22Q14807 665 aa17.19■□□□□ 0.34
COPS3-201ENST00000268717 ARHGEF6Q15052 776 aa17.19■□□□□ 0.34
COPS3-201ENST00000268717 COBLL1Q53SF7 1204 aa17.19■□□□□ 0.34
COPS3-201ENST00000268717 CPXCR1Q8N123 301 aa17.19■□□□□ 0.34
COPS3-201ENST00000268717 STAMQ92783 540 aa17.19■□□□□ 0.34
COPS3-201ENST00000268717 VAV3Q9UKW4 847 aa17.19■□□□□ 0.34
COPS3-201ENST00000268717 DOCK3Q8IZD9 2030 aa17.19■□□□□ 0.34
COPS3-201ENST00000268717 PVALEFA0A1B0GWK0 134 aa17.18■□□□□ 0.34
COPS3-201ENST00000268717 PPP1R3GB7ZBB8 358 aa17.18■□□□□ 0.34
COPS3-201ENST00000268717 XRRA1Q6P2D8 792 aa17.18■□□□□ 0.34
COPS3-201ENST00000268717 ZSCAN30Q86W11 494 aa17.18■□□□□ 0.34
COPS3-201ENST00000268717 SYTL5Q8TDW5 730 aaPredicted RBP17.18■□□□□ 0.34
COPS3-201ENST00000268717 SLC5A5Q92911 643 aa17.18■□□□□ 0.34
COPS3-201ENST00000268717 TRERF1Q96PN7 1200 aa17.18■□□□□ 0.34
COPS3-201ENST00000268717 TEX13BQ9BXU2 312 aa17.18■□□□□ 0.34
COPS3-201ENST00000268717 ASCC2Q9H1I8 757 aaPredicted RBP17.18■□□□□ 0.34
COPS3-201ENST00000268717 ZNF214Q9UL59 606 aaPredicted RBP17.18■□□□□ 0.34
COPS3-201ENST00000268717 PTPN22Q9Y2R2 807 aa17.18■□□□□ 0.34
COPS3-201ENST00000268717 ZNF18P17022 549 aa17.18■□□□□ 0.34
COPS3-201ENST00000268717 MUTP22033 750 aa17.18■□□□□ 0.34
COPS3-201ENST00000268717 OSBPP22059 807 aa17.18■□□□□ 0.34
COPS3-201ENST00000268717 RPA1P27694 616 aa17.18■□□□□ 0.34
COPS3-201ENST00000268717 CCT6AP40227 531 aaKnown RBP17.18■□□□□ 0.34
COPS3-201ENST00000268717 PCNX4Q63HM2 1172 aa17.18■□□□□ 0.34
COPS3-201ENST00000268717 MB21D1Q8N884 522 aa17.18■□□□□ 0.34
COPS3-201ENST00000268717 GIMAP8Q8ND71 665 aaPredicted RBP17.18■□□□□ 0.34
COPS3-201ENST00000268717 PLIN2Q99541 437 aa17.18■□□□□ 0.34
COPS3-201ENST00000268717 SPDYE16A6NNV3 312 aaPredicted RBP17.17■□□□□ 0.34
COPS3-201ENST00000268717 ESPNB1AK53 854 aa17.17■□□□□ 0.34
COPS3-201ENST00000268717 CBFA2T2O43439 604 aa17.17■□□□□ 0.34
COPS3-201ENST00000268717 PSMD10O75832 226 aa17.17■□□□□ 0.34
COPS3-201ENST00000268717 GNRH1P01148 92 aa17.17■□□□□ 0.34
COPS3-201ENST00000268717 CTGFP29279 349 aa17.17■□□□□ 0.34
COPS3-201ENST00000268717 PPP2R5CQ13362 524 aa17.17■□□□□ 0.34
COPS3-201ENST00000268717 KMT5BQ4FZB7 885 aa17.17■□□□□ 0.34
COPS3-201ENST00000268717 MUM1L1Q5H9M0 696 aa17.17■□□□□ 0.34
COPS3-201ENST00000268717 SPATA1Q5VX52 437 aa17.17■□□□□ 0.34
COPS3-201ENST00000268717 NUDT12Q9BQG2 462 aa17.17■□□□□ 0.34
COPS3-201ENST00000268717 MXRA8Q9BRK3 442 aa17.17■□□□□ 0.34
COPS3-201ENST00000268717 POLR3CQ9BUI4 534 aaPredicted RBP17.17■□□□□ 0.34
COPS3-201ENST00000268717 WDR11Q9BZH6 1224 aa17.17■□□□□ 0.34
COPS3-201ENST00000268717 RNF146Q9NTX7 359 aa17.17■□□□□ 0.34
COPS3-201ENST00000268717 COL20A1Q9P218 1284 aa17.17■□□□□ 0.34
COPS3-201ENST00000268717 RWDD2AQ9UIY3 292 aa17.17■□□□□ 0.34
COPS3-201ENST00000268717 NFE2L3Q9Y4A8 694 aa17.17■□□□□ 0.34
COPS3-201ENST00000268717 RBBP6Q7Z6E9 1792 aaKnown RBP17.17■□□□□ 0.34
COPS3-201ENST00000268717 SYNRGQ9UMZ2 1314 aa17.16■□□□□ 0.34
COPS3-201ENST00000268717 CD44P16070 742 aaKnown RBP17.16■□□□□ 0.34
COPS3-201ENST00000268717 PSMC4P43686 418 aa17.16■□□□□ 0.34
COPS3-201ENST00000268717 RPS6P62753 249 aaKnown RBP17.16■□□□□ 0.34
COPS3-201ENST00000268717 IRX3P78415 501 aaPredicted RBP17.16■□□□□ 0.34
COPS3-201ENST00000268717 STIM1Q13586 685 aa17.16■□□□□ 0.34
COPS3-201ENST00000268717 SNRNP48Q6IEG0 339 aaKnown RBP17.16■□□□□ 0.34
COPS3-201ENST00000268717 LBX2Q6XYB7 198 aa17.16■□□□□ 0.34
COPS3-201ENST00000268717 RNF207Q6ZRF8 634 aa17.16■□□□□ 0.34
COPS3-201ENST00000268717 UNC13DQ70J99 1090 aa17.16■□□□□ 0.34
COPS3-201ENST00000268717 ADSSL1Q8N142 457 aa17.16■□□□□ 0.34
COPS3-201ENST00000268717 CYP2W1Q8TAV3 490 aa17.16■□□□□ 0.34
COPS3-201ENST00000268717 TRIM47Q96LD4 638 aa17.16■□□□□ 0.34
COPS3-201ENST00000268717 RIT2Q99578 217 aa17.16■□□□□ 0.34
COPS3-201ENST00000268717 COL11A1P12107 1806 aaPredicted RBP17.16■□□□□ 0.34
COPS3-201ENST00000268717 ECM2O94769 699 aaPredicted RBP17.15■□□□□ 0.34
COPS3-201ENST00000268717 GCLCP48506 637 aaPredicted RBP17.15■□□□□ 0.34
COPS3-201ENST00000268717 ASIC1P78348 528 aa17.15■□□□□ 0.34
COPS3-201ENST00000268717 FANCCQ00597 558 aa17.15■□□□□ 0.34
COPS3-201ENST00000268717 PAK1Q13153 545 aa17.15■□□□□ 0.34
COPS3-201ENST00000268717 DHX8Q14562 1220 aaKnown RBP17.15■□□□□ 0.34
COPS3-201ENST00000268717 TMEM132BQ14DG7 1078 aa17.15■□□□□ 0.34
COPS3-201ENST00000268717 FAM110CQ1W6H9 321 aa17.15■□□□□ 0.34
COPS3-201ENST00000268717 ANKRD13CQ8N6S4 541 aa17.15■□□□□ 0.34
COPS3-201ENST00000268717 GJA10Q969M2 543 aa17.15■□□□□ 0.34
COPS3-201ENST00000268717 MED15Q96RN5 788 aa17.15■□□□□ 0.34
COPS3-201ENST00000268717 EXOC1Q9NV70 894 aa17.15■□□□□ 0.34
COPS3-201ENST00000268717 FANCLQ9NW38 375 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms