RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 PDXDC2PQ6P474 469 aa21.76■■□□□ 1.07
CSPG5-201ENST00000264723 MIER3Q7Z3K6 550 aa21.76■■□□□ 1.07
CSPG5-201ENST00000264723 TMEM139Q8IV31 216 aa21.76■■□□□ 1.07
CSPG5-201ENST00000264723 CCDC170Q8IYT3 715 aa21.76■■□□□ 1.07
CSPG5-201ENST00000264723 ZNF277Q9NRM2 450 aaPredicted RBP21.76■■□□□ 1.07
CSPG5-201ENST00000264723 BEND6Q5SZJ8 279 aaPredicted RBP21.75■■□□□ 1.07
CSPG5-201ENST00000264723 MED15Q96RN5 788 aa21.75■■□□□ 1.07
CSPG5-201ENST00000264723 ANKZF1Q9H8Y5 726 aa21.75■■□□□ 1.07
CSPG5-201ENST00000264723 FMN2Q9NZ56 1722 aa21.75■■□□□ 1.07
CSPG5-201ENST00000264723 PRPF6O94906 941 aaKnown RBP21.75■■□□□ 1.07
CSPG5-201ENST00000264723 EN1Q05925 392 aaPredicted RBP21.75■■□□□ 1.07
CSPG5-201ENST00000264723 PAK2Q13177 524 aa21.75■■□□□ 1.07
CSPG5-201ENST00000264723 GRM1Q13255 1194 aa21.75■■□□□ 1.07
CSPG5-201ENST00000264723 PODNQ7Z5L7 613 aa21.75■■□□□ 1.07
CSPG5-201ENST00000264723 RETREG2Q8NC44 543 aa21.75■■□□□ 1.07
CSPG5-201ENST00000264723 ANO3Q9BYT9 981 aa21.75■■□□□ 1.07
CSPG5-201ENST00000264723 GINS2Q9Y248 185 aa21.75■■□□□ 1.07
CSPG5-201ENST00000264723 COL4A3BPQ9Y5P4 624 aa21.75■■□□□ 1.07
CSPG5-201ENST00000264723 CNTNAP4Q9C0A0 1308 aa21.75■■□□□ 1.07
CSPG5-201ENST00000264723 LTN1O94822 1766 aa21.75■■□□□ 1.07
CSPG5-201ENST00000264723 ZBED4O75132 1171 aa21.75■■□□□ 1.07
CSPG5-201ENST00000264723 KSR1Q8IVT5 923 aa21.75■■□□□ 1.07
CSPG5-201ENST00000264723 ADGRF4Q8IZF3 695 aa21.75■■□□□ 1.07
CSPG5-201ENST00000264723 GOLPH3Q9H4A6 298 aa21.75■■□□□ 1.07
CSPG5-201ENST00000264723 POTEB3A0JP26 581 aa21.75■■□□□ 1.07
CSPG5-201ENST00000264723 POTECB2RU33 542 aa21.75■■□□□ 1.07
CSPG5-201ENST00000264723 F5H6K3 240 aa21.75■■□□□ 1.07
CSPG5-201ENST00000264723 KLRC3Q07444 240 aa21.75■■□□□ 1.07
CSPG5-201ENST00000264723 POTEBQ6S5H4 581 aa21.75■■□□□ 1.07
CSPG5-201ENST00000264723 CPLX4Q7Z7G2 160 aa21.75■■□□□ 1.07
CSPG5-201ENST00000264723 DNAAF5Q86Y56 855 aa21.75■■□□□ 1.07
CSPG5-201ENST00000264723 TNS2Q63HR2 1409 aa21.74■■□□□ 1.07
CSPG5-201ENST00000264723 MYMKA6NI61 221 aa21.74■■□□□ 1.07
CSPG5-201ENST00000264723 KRT5P13647 590 aa21.74■■□□□ 1.07
CSPG5-201ENST00000264723 CUEDC2Q9H467 287 aa21.74■■□□□ 1.07
CSPG5-201ENST00000264723 RABGAP1Q9Y3P9 1069 aa21.74■■□□□ 1.07
CSPG5-201ENST00000264723 E7EVH7 732 aa21.74■■□□□ 1.07
CSPG5-201ENST00000264723 TNFAIP3P21580 790 aa21.74■■□□□ 1.07
CSPG5-201ENST00000264723 CETN2P41208 172 aa21.74■■□□□ 1.07
CSPG5-201ENST00000264723 QRICH1Q2TAL8 776 aa21.74■■□□□ 1.07
CSPG5-201ENST00000264723 SYDE2Q5VT97 1194 aa21.74■■□□□ 1.07
CSPG5-201ENST00000264723 RSRC2Q7L4I2 434 aaKnown RBP21.74■■□□□ 1.07
CSPG5-201ENST00000264723 SLFN12Q8IYM2 578 aa21.74■■□□□ 1.07
CSPG5-201ENST00000264723 PIGOQ8TEQ8 1089 aa21.74■■□□□ 1.07
CSPG5-201ENST00000264723 CCDC127Q96BQ5 260 aa21.74■■□□□ 1.07
CSPG5-201ENST00000264723 BHMT2Q9H2M3 363 aa21.74■■□□□ 1.07
CSPG5-201ENST00000264723 MRPL11Q9Y3B7 192 aaKnown RBP21.74■■□□□ 1.07
CSPG5-201ENST00000264723 PALMO75781 387 aa21.74■■□□□ 1.07
CSPG5-201ENST00000264723 PDCLQ13371 301 aa21.74■■□□□ 1.07
CSPG5-201ENST00000264723 SP8Q8IXZ3 490 aa21.74■■□□□ 1.07
CSPG5-201ENST00000264723 COG1Q8WTW3 980 aa21.74■■□□□ 1.07
CSPG5-201ENST00000264723 EMILIN3Q9NT22 766 aa21.74■■□□□ 1.07
CSPG5-201ENST00000264723 LRRIQ3A6PVS8 624 aaPredicted RBP21.73■■□□□ 1.07
CSPG5-201ENST00000264723 ADAMTS3O15072 1205 aa21.73■■□□□ 1.07
CSPG5-201ENST00000264723 INPP5BP32019 993 aa21.73■■□□□ 1.07
CSPG5-201ENST00000264723 EZH2Q15910 746 aaKnown RBP21.73■■□□□ 1.07
CSPG5-201ENST00000264723 ODR4Q5SWX8 454 aa21.73■■□□□ 1.07
CSPG5-201ENST00000264723 ZNF772Q68DY9 489 aaPredicted RBP21.73■■□□□ 1.07
CSPG5-201ENST00000264723 POLLQ9UGP5 575 aa21.73■■□□□ 1.07
CSPG5-201ENST00000264723 ANAPC4Q9UJX5 808 aa21.73■■□□□ 1.07
CSPG5-201ENST00000264723 ZBTB12Q9Y330 459 aaPredicted RBP21.73■■□□□ 1.07
CSPG5-201ENST00000264723 STXBP3O00186 592 aa21.73■■□□□ 1.07
CSPG5-201ENST00000264723 KRIT1O00522 736 aa21.73■■□□□ 1.07
CSPG5-201ENST00000264723 ZBTB5O15062 677 aa21.73■■□□□ 1.07
CSPG5-201ENST00000264723 STAT2P52630 851 aa21.73■■□□□ 1.07
CSPG5-201ENST00000264723 NT5DC1Q5TFE4 455 aa21.73■■□□□ 1.07
CSPG5-201ENST00000264723 TTLL6Q8N841 843 aa21.73■■□□□ 1.07
CSPG5-201ENST00000264723 TMOD4Q9NZQ9 345 aa21.73■■□□□ 1.07
CSPG5-201ENST00000264723 PLA2G4BP0C869 781 aa21.73■■□□□ 1.07
CSPG5-201ENST00000264723 GYS1P13807 737 aa21.73■■□□□ 1.07
CSPG5-201ENST00000264723 ZBTB7AO95365 584 aa21.72■■□□□ 1.07
CSPG5-201ENST00000264723 IL17AQ16552 155 aa21.72■■□□□ 1.07
CSPG5-201ENST00000264723 SBK1Q52WX2 424 aa21.72■■□□□ 1.07
CSPG5-201ENST00000264723 MTMR4Q9NYA4 1195 aa21.72■■□□□ 1.07
CSPG5-201ENST00000264723 ZRANB2O95218 330 aaKnown RBP eCLIP21.72■■□□□ 1.07
CSPG5-201ENST00000264723 CTNNA2P26232 953 aa21.72■■□□□ 1.07
CSPG5-201ENST00000264723 CTTNQ14247 550 aaKnown RBP21.72■■□□□ 1.07
CSPG5-201ENST00000264723 MKRN1Q9UHC7 482 aaKnown RBP21.72■■□□□ 1.07
CSPG5-201ENST00000264723 GOLGA6L10A0A0M3HER8 536 aa21.72■■□□□ 1.07
CSPG5-201ENST00000264723 SRGNP10124 158 aa21.72■■□□□ 1.07
CSPG5-201ENST00000264723 EXOC3L4Q17RC7 722 aa21.72■■□□□ 1.07
CSPG5-201ENST00000264723 MICALCLQ6ZW33 695 aa21.72■■□□□ 1.07
CSPG5-201ENST00000264723 SH2D3CQ8N5H7 860 aa21.72■■□□□ 1.07
CSPG5-201ENST00000264723 GIMAP8Q8ND71 665 aaPredicted RBP21.72■■□□□ 1.07
CSPG5-201ENST00000264723 OSBPL9Q96SU4 736 aa21.72■■□□□ 1.07
CSPG5-201ENST00000264723 IL17RBQ9NRM6 502 aa21.72■■□□□ 1.07
CSPG5-201ENST00000264723 RGPD1P0DJD0 1748 aa21.72■■□□□ 1.07
CSPG5-201ENST00000264723 KRT71Q3SY84 523 aa21.71■■□□□ 1.07
CSPG5-201ENST00000264723 PAGR1Q9BTK6 254 aa21.71■■□□□ 1.07
CSPG5-201ENST00000264723 SH3GLB2Q9NR46 395 aa21.71■■□□□ 1.07
CSPG5-201ENST00000264723 LRRN2O75325 713 aa21.71■■□□□ 1.07
CSPG5-201ENST00000264723 RHOBTB3O94955 611 aa21.71■■□□□ 1.07
CSPG5-201ENST00000264723 FOSP01100 380 aaPredicted RBP21.71■■□□□ 1.07
CSPG5-201ENST00000264723 SMTNP53814 917 aa21.71■■□□□ 1.07
CSPG5-201ENST00000264723 SLC27A3Q5K4L6 730 aa21.71■■□□□ 1.07
CSPG5-201ENST00000264723 UNC13DQ70J99 1090 aa21.71■■□□□ 1.07
CSPG5-201ENST00000264723 USP37Q86T82 979 aa21.71■■□□□ 1.07
CSPG5-201ENST00000264723 LMBR1Q8WVP7 490 aa21.71■■□□□ 1.07
CSPG5-201ENST00000264723 CNKSR2Q8WXI2 1034 aa21.71■■□□□ 1.07
CSPG5-201ENST00000264723 CCSER1Q9C0I3 900 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms