RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 RFX7Q2KHR2 1363 aa16.39■□□□□ 0.21
CASC3-201ENST00000264645 PPP1R3GB7ZBB8 358 aa16.38■□□□□ 0.21
CASC3-201ENST00000264645 SNAP23O00161 211 aa16.38■□□□□ 0.21
CASC3-201ENST00000264645 PLEKP08567 350 aaPredicted RBP16.38■□□□□ 0.21
CASC3-201ENST00000264645 TMED2Q15363 201 aa16.38■□□□□ 0.21
CASC3-201ENST00000264645 NT5C3AQ9H0P0 336 aa16.38■□□□□ 0.21
CASC3-201ENST00000264645 RIC8AQ9NPQ8 531 aa16.38■□□□□ 0.21
CASC3-201ENST00000264645 TFCP2L1Q9NZI6 479 aa16.38■□□□□ 0.21
CASC3-201ENST00000264645 TBX22Q9Y458 520 aa16.38■□□□□ 0.21
CASC3-201ENST00000264645 RAD51CO43502 376 aa16.38■□□□□ 0.21
CASC3-201ENST00000264645 TRIP13Q15645 432 aaPredicted RBP16.38■□□□□ 0.21
CASC3-201ENST00000264645 ANKRD40Q6AI12 368 aa16.38■□□□□ 0.21
CASC3-201ENST00000264645 SGMS1Q86VZ5 419 aa16.38■□□□□ 0.21
CASC3-201ENST00000264645 LONP2Q86WA8 852 aa16.38■□□□□ 0.21
CASC3-201ENST00000264645 ANKRD35Q8N283 1001 aa16.38■□□□□ 0.21
CASC3-201ENST00000264645 HPS3Q969F9 1004 aa16.38■□□□□ 0.21
CASC3-201ENST00000264645 WDR91A4D1P6 747 aa16.38■□□□□ 0.21
CASC3-201ENST00000264645 RASSF10A6NK89 507 aa16.38■□□□□ 0.21
CASC3-201ENST00000264645 CCT8L1PA6NM43 557 aa16.38■□□□□ 0.21
CASC3-201ENST00000264645 RPS6KA5O75582 802 aa16.38■□□□□ 0.21
CASC3-201ENST00000264645 FCER1AP12319 257 aa16.38■□□□□ 0.21
CASC3-201ENST00000264645 ATF2P15336 505 aa16.38■□□□□ 0.21
CASC3-201ENST00000264645 CHN1P15882 459 aa16.38■□□□□ 0.21
CASC3-201ENST00000264645 ZNF211Q13398 564 aaPredicted RBP16.38■□□□□ 0.21
CASC3-201ENST00000264645 SWT1Q5T5J6 900 aaKnown RBP16.38■□□□□ 0.21
CASC3-201ENST00000264645 ZBTB38Q8NAP3 1195 aaPredicted RBP16.38■□□□□ 0.21
CASC3-201ENST00000264645 AK8Q96MA6 479 aa16.38■□□□□ 0.21
CASC3-201ENST00000264645 XPO6Q96QU8 1125 aaKnown RBP16.38■□□□□ 0.21
CASC3-201ENST00000264645 SYNCQ9H7C4 482 aa16.38■□□□□ 0.21
CASC3-201ENST00000264645 LRRN2O75325 713 aa16.38■□□□□ 0.21
CASC3-201ENST00000264645 SRGNP10124 158 aa16.38■□□□□ 0.21
CASC3-201ENST00000264645 PSMD2Q13200 908 aa16.38■□□□□ 0.21
CASC3-201ENST00000264645 PDE1CQ14123 709 aaPredicted RBP16.38■□□□□ 0.21
CASC3-201ENST00000264645 PAPD7Q5XG87 772 aaKnown RBP16.38■□□□□ 0.21
CASC3-201ENST00000264645 SLF2Q8IX21 1173 aa16.38■□□□□ 0.21
CASC3-201ENST00000264645 INTS13Q9NVM9 706 aa16.38■□□□□ 0.21
CASC3-201ENST00000264645 WDR19Q8NEZ3 1342 aa16.37■□□□□ 0.21
CASC3-201ENST00000264645 PCCAP05165 728 aaPredicted RBP16.37■□□□□ 0.21
CASC3-201ENST00000264645 DESP17661 470 aa16.37■□□□□ 0.21
CASC3-201ENST00000264645 SCTRP47872 440 aa16.37■□□□□ 0.21
CASC3-201ENST00000264645 AARSP49588 968 aaKnown RBP eCLIP16.37■□□□□ 0.217e-10■■■■□ 22.7
CASC3-201ENST00000264645 PMS2P54278 862 aa16.37■□□□□ 0.21
CASC3-201ENST00000264645 RCN2Q14257 317 aa16.37■□□□□ 0.21
CASC3-201ENST00000264645 TAB3Q8N5C8 712 aaPredicted RBP16.37■□□□□ 0.21
CASC3-201ENST00000264645 ZKSCAN4Q969J2 545 aaPredicted RBP16.37■□□□□ 0.21
CASC3-201ENST00000264645 NUDCD1Q96RS6 583 aa16.37■□□□□ 0.21
CASC3-201ENST00000264645 PRMT1Q99873 361 aaKnown RBP16.37■□□□□ 0.21
CASC3-201ENST00000264645 ZBTB21Q9ULJ3 1066 aa16.37■□□□□ 0.21
CASC3-201ENST00000264645 KIAA1024Q9UPX6 916 aa16.37■□□□□ 0.21
CASC3-201ENST00000264645 SHROOM2Q13796 1616 aa16.37■□□□□ 0.21
CASC3-201ENST00000264645 STRN3Q13033 797 aa16.37■□□□□ 0.21
CASC3-201ENST00000264645 USP37Q86T82 979 aa16.37■□□□□ 0.21
CASC3-201ENST00000264645 ADSSL1Q8N142 457 aa16.37■□□□□ 0.21
CASC3-201ENST00000264645 HOOK2Q96ED9 719 aa16.37■□□□□ 0.21
CASC3-201ENST00000264645 PPP1R9AQ9ULJ8 1098 aa16.37■□□□□ 0.21
CASC3-201ENST00000264645 SPHKAPQ2M3C7 1700 aa16.37■□□□□ 0.21
CASC3-201ENST00000264645 H7C1W4 665 aa16.37■□□□□ 0.21
CASC3-201ENST00000264645 I3L4J1 428 aa16.37■□□□□ 0.21
CASC3-201ENST00000264645 ANP32DO95626 131 aa16.37■□□□□ 0.21
CASC3-201ENST00000264645 DYNLL1P63167 89 aaKnown RBP16.37■□□□□ 0.21
CASC3-201ENST00000264645 DBN1Q16643 649 aa16.37■□□□□ 0.21
CASC3-201ENST00000264645 TRPM8Q7Z2W7 1104 aa16.37■□□□□ 0.21
CASC3-201ENST00000264645 SRRM1Q8IYB3 904 aaKnown RBP16.37■□□□□ 0.21
CASC3-201ENST00000264645 NOC2LQ9Y3T9 749 aaKnown RBP16.37■□□□□ 0.21
CASC3-201ENST00000264645 IQGAP1P46940 1657 aa16.37■□□□□ 0.21
CASC3-201ENST00000264645 PSMD6Q15008 389 aa16.36■□□□□ 0.21
CASC3-201ENST00000264645 CCDC110Q8TBZ0 833 aa16.36■□□□□ 0.21
CASC3-201ENST00000264645 CYTH2Q99418 400 aa16.36■□□□□ 0.21
CASC3-201ENST00000264645 ZSCAN5CA6NGD5 496 aaPredicted RBP16.36■□□□□ 0.21
CASC3-201ENST00000264645 MAPKAPK5Q8IW41 473 aa16.36■□□□□ 0.21
CASC3-201ENST00000264645 TBCKQ8TEA7 893 aa16.36■□□□□ 0.21
CASC3-201ENST00000264645 GOLPH3Q9H4A6 298 aa16.36■□□□□ 0.21
CASC3-201ENST00000264645 GRID2IPA4D2P6 1211 aa16.36■□□□□ 0.21
CASC3-201ENST00000264645 TTI1O43156 1089 aa16.36■□□□□ 0.21
CASC3-201ENST00000264645 CA4P22748 312 aa16.36■□□□□ 0.21
CASC3-201ENST00000264645 LRRC63Q05C16 580 aa16.36■□□□□ 0.21
CASC3-201ENST00000264645 CTAGE3PQ8IX95 158 aa16.36■□□□□ 0.21
CASC3-201ENST00000264645 GSDMBQ8TAX9 411 aa16.36■□□□□ 0.21
CASC3-201ENST00000264645 RUBCNQ92622 972 aa16.36■□□□□ 0.21
CASC3-201ENST00000264645 TYW1Q9NV66 732 aaKnown RBP16.36■□□□□ 0.21
CASC3-201ENST00000264645 ROBO2Q9HCK4 1378 aa16.35■□□□□ 0.21
CASC3-201ENST00000264645 TCP11X1B4DZS4 312 aa16.35■□□□□ 0.21
CASC3-201ENST00000264645 LAD1O00515 517 aa16.35■□□□□ 0.21
CASC3-201ENST00000264645 LTKP29376 864 aa16.35■□□□□ 0.21
CASC3-201ENST00000264645 KIFAP3Q92845 792 aa16.35■□□□□ 0.21
CASC3-201ENST00000264645 NLRP3Q96P20 1036 aa16.35■□□□□ 0.21
CASC3-201ENST00000264645 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.35■□□□□ 0.218e-8■■□□□ 12.1
CASC3-201ENST00000264645 CEP152O94986 1710 aa16.35■□□□□ 0.21
CASC3-201ENST00000264645 INO80Q9ULG1 1556 aaPredicted RBP16.35■□□□□ 0.21
CASC3-201ENST00000264645 MAPK13O15264 365 aa16.35■□□□□ 0.21
CASC3-201ENST00000264645 MAP3K7O43318 606 aa16.35■□□□□ 0.21
CASC3-201ENST00000264645 ECEL1O95672 775 aa16.35■□□□□ 0.21
CASC3-201ENST00000264645 BRAFP15056 766 aa16.35■□□□□ 0.21
CASC3-201ENST00000264645 FERP16591 822 aa16.35■□□□□ 0.21
CASC3-201ENST00000264645 ATP2C1P98194 919 aaPredicted RBP16.35■□□□□ 0.21
CASC3-201ENST00000264645 DYDC2Q96IM9 177 aa16.35■□□□□ 0.21
CASC3-201ENST00000264645 CALR3Q96L12 384 aaKnown RBP16.35■□□□□ 0.21
CASC3-201ENST00000264645 STOML1Q9UBI4 398 aa16.35■□□□□ 0.21
CASC3-201ENST00000264645 AFPP02771 609 aaKnown RBP16.35■□□□□ 0.21
CASC3-201ENST00000264645 MYBL1P10243 752 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms