RNA–Protein interactions for RNA: ENST00000264187.6

NID1-201, Transcript of nidogen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NID1, Length 5,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-201ENST00000264187 KIAA1841Q6NSI8 718 aa16.3■□□□□ 0.2
NID1-201ENST00000264187 CLRN2A0PK11 232 aa16.3■□□□□ 0.2
NID1-201ENST00000264187 CA4P22748 312 aa16.3■□□□□ 0.2
NID1-201ENST00000264187 ALDH1B1P30837 517 aa16.3■□□□□ 0.2
NID1-201ENST00000264187 LONP1P36776 959 aaKnown RBP16.3■□□□□ 0.2
NID1-201ENST00000264187 RBM6P78332 1123 aaKnown RBP16.3■□□□□ 0.2
NID1-201ENST00000264187 SCRN1Q12765 414 aa16.3■□□□□ 0.2
NID1-201ENST00000264187 CAPRIN1Q14444 709 aaKnown RBP16.3■□□□□ 0.2
NID1-201ENST00000264187 CCDC85BQ15834 202 aaPredicted RBP16.3■□□□□ 0.2
NID1-201ENST00000264187 METTL23Q86XA0 190 aa16.3■□□□□ 0.2
NID1-201ENST00000264187 EFCAB13Q8IY85 973 aa16.3■□□□□ 0.2
NID1-201ENST00000264187 A0A1W2PP64 1363 aa16.29■□□□□ 0.2
NID1-201ENST00000264187 TADA3O75528 432 aa16.29■□□□□ 0.2
NID1-201ENST00000264187 FBXW4P57775 412 aa16.29■□□□□ 0.2
NID1-201ENST00000264187 TTC30AQ86WT1 665 aa16.29■□□□□ 0.2
NID1-201ENST00000264187 HSPH1Q92598 858 aa16.29■□□□□ 0.2
NID1-201ENST00000264187 SMYD3Q9H7B4 428 aa16.29■□□□□ 0.2
NID1-201ENST00000264187 MRFAP1Q9Y605 127 aa16.29■□□□□ 0.2
NID1-201ENST00000264187 KIF14Q15058 1648 aa16.29■□□□□ 0.2
NID1-201ENST00000264187 RASGRF2O14827 1237 aa16.29■□□□□ 0.2
NID1-201ENST00000264187 E2F6O75461 281 aa16.29■□□□□ 0.2
NID1-201ENST00000264187 TNFAIP1Q13829 316 aa16.29■□□□□ 0.2
NID1-201ENST00000264187 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.29■□□□□ 0.24e-8■■■□□ 16.9
NID1-201ENST00000264187 C19orf44Q9H6X5 657 aa16.29■□□□□ 0.2
NID1-201ENST00000264187 ANGPTL2Q9UKU9 493 aa16.29■□□□□ 0.2
NID1-201ENST00000264187 LRFN2Q9ULH4 789 aa16.29■□□□□ 0.2
NID1-201ENST00000264187 KCNA1Q09470 495 aa16.29■□□□□ 0.2
NID1-201ENST00000264187 DPCR1Q3MIW9 517 aa16.29■□□□□ 0.2
NID1-201ENST00000264187 TTC1Q99614 292 aa16.29■□□□□ 0.2
NID1-201ENST00000264187 LRRC4Q9HBW1 653 aa16.29■□□□□ 0.2
NID1-201ENST00000264187 KITP10721 976 aa16.29■□□□□ 0.2
NID1-201ENST00000264187 DDIT3P35638 169 aa16.29■□□□□ 0.2
NID1-201ENST00000264187 LRRC24Q50LG9 513 aa16.29■□□□□ 0.2
NID1-201ENST00000264187 NEURL1BA8MQ27 555 aa16.29■□□□□ 0.2
NID1-201ENST00000264187 KRT26Q7Z3Y9 468 aa16.29■□□□□ 0.2
NID1-201ENST00000264187 ZC3H18Q86VM9 953 aaKnown RBP16.29■□□□□ 0.2
NID1-201ENST00000264187 TTC17Q96AE7 1141 aa16.29■□□□□ 0.2
NID1-201ENST00000264187 GCNT4Q9P109 453 aa16.29■□□□□ 0.2
NID1-201ENST00000264187 MRC2Q9UBG0 1479 aa16.29■□□□□ 0.2
NID1-201ENST00000264187 APBA3O96018 575 aa16.28■□□□□ 0.2
NID1-201ENST00000264187 GYS2P54840 703 aa16.28■□□□□ 0.2
NID1-201ENST00000264187 FLOT2Q14254 428 aa16.28■□□□□ 0.2
NID1-201ENST00000264187 SLC7A3Q8WY07 619 aa16.28■□□□□ 0.2
NID1-201ENST00000264187 SLC12A6Q9UHW9 1150 aa16.28■□□□□ 0.2
NID1-201ENST00000264187 PARD3Q8TEW0 1356 aa16.28■□□□□ 0.2
NID1-201ENST00000264187 ABCC1P33527 1531 aa16.28■□□□□ 0.2
NID1-201ENST00000264187 EIF3CLB5ME19 914 aaKnown RBP16.28■□□□□ 0.2
NID1-201ENST00000264187 ATP2B4P23634 1241 aa16.28■□□□□ 0.2
NID1-201ENST00000264187 PMS1P54277 932 aaKnown RBP16.28■□□□□ 0.2
NID1-201ENST00000264187 SMAD1Q15797 465 aaKnown RBP16.28■□□□□ 0.2
NID1-201ENST00000264187 ABCB5Q2M3G0 1257 aa16.28■□□□□ 0.2
NID1-201ENST00000264187 EIF3CQ99613 913 aaKnown RBP16.28■□□□□ 0.2
NID1-201ENST00000264187 TM6SF1Q9BZW5 370 aa16.28■□□□□ 0.2
NID1-201ENST00000264187 PRPSAP2O60256 369 aa16.28■□□□□ 0.2
NID1-201ENST00000264187 ESRRBO95718 433 aa16.28■□□□□ 0.2
NID1-201ENST00000264187 PDIA3P30101 505 aaKnown RBP16.28■□□□□ 0.2
NID1-201ENST00000264187 NUGGCQ68CJ6 796 aa16.28■□□□□ 0.2
NID1-201ENST00000264187 UPF3AQ9H1J1 476 aaKnown RBP16.28■□□□□ 0.2
NID1-201ENST00000264187 TTI1O43156 1089 aa16.28■□□□□ 0.2
NID1-201ENST00000264187 ZNF500O60304 480 aaPredicted RBP16.28■□□□□ 0.2
NID1-201ENST00000264187 HSPA4LO95757 839 aa16.28■□□□□ 0.2
NID1-201ENST00000264187 GPR162Q16538 588 aa16.28■□□□□ 0.2
NID1-201ENST00000264187 C11orf57Q6ZUT1 292 aaPredicted RBP16.28■□□□□ 0.2
NID1-201ENST00000264187 CCDC90BQ9GZT6 254 aa16.28■□□□□ 0.2
NID1-201ENST00000264187 HADHAP40939 763 aa16.27■□□□□ 0.2
NID1-201ENST00000264187 RWDD4Q6NW29 188 aaKnown RBP16.27■□□□□ 0.2
NID1-201ENST00000264187 P2RX5Q93086 422 aa16.27■□□□□ 0.2
NID1-201ENST00000264187 ELAC2Q9BQ52 826 aaKnown RBP16.27■□□□□ 0.2
NID1-201ENST00000264187 TSR3Q9UJK0 312 aaKnown RBP16.27■□□□□ 0.2
NID1-201ENST00000264187 JRKLQ9Y4A0 524 aa16.27■□□□□ 0.2
NID1-201ENST00000264187 PCF11O94913 1555 aaKnown RBP16.27■□□□□ 0.2
NID1-201ENST00000264187 GOLGA8IPA6NC78 632 aa16.27■□□□□ 0.2
NID1-201ENST00000264187 GOLGA8JA6NMD2 632 aa16.27■□□□□ 0.2
NID1-201ENST00000264187 F5H423 210 aaPredicted RBP16.27■□□□□ 0.2
NID1-201ENST00000264187 CYP27A1Q02318 531 aa16.27■□□□□ 0.2
NID1-201ENST00000264187 C16orf87Q6PH81 154 aa16.27■□□□□ 0.2
NID1-201ENST00000264187 EAF2Q96CJ1 260 aaPredicted RBP16.27■□□□□ 0.2
NID1-201ENST00000264187 HEXIM2Q96MH2 286 aaKnown RBP16.27■□□□□ 0.2
NID1-201ENST00000264187 YY1AP1Q9H869 796 aa16.27■□□□□ 0.2
NID1-201ENST00000264187 SYCE1LA8MT33 242 aa16.27■□□□□ 0.2
NID1-201ENST00000264187 KCTD2Q14681 263 aa16.27■□□□□ 0.2
NID1-201ENST00000264187 GRAMD4Q6IC98 578 aa16.27■□□□□ 0.2
NID1-201ENST00000264187 SIX6OS1Q8N1H7 587 aa16.27■□□□□ 0.2
NID1-201ENST00000264187 CEP170P1Q96L14 293 aa16.27■□□□□ 0.2
NID1-201ENST00000264187 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.27■□□□□ 0.2
NID1-201ENST00000264187 DENND4BO75064 1496 aaPredicted RBP16.27■□□□□ 0.19
NID1-201ENST00000264187 CHEK2O96017 543 aa16.27■□□□□ 0.19
NID1-201ENST00000264187 HSPA6P17066 643 aa16.27■□□□□ 0.19
NID1-201ENST00000264187 EIF4A3P38919 411 aaKnown RBP16.27■□□□□ 0.19
NID1-201ENST00000264187 KPNA2P52292 529 aaKnown RBP16.27■□□□□ 0.19
NID1-201ENST00000264187 GIPC2Q8TF65 315 aa16.27■□□□□ 0.19
NID1-201ENST00000264187 PYROXD1Q8WU10 500 aa16.27■□□□□ 0.19
NID1-201ENST00000264187 SNX19Q92543 992 aa16.27■□□□□ 0.19
NID1-201ENST00000264187 SERPINI1Q99574 410 aa16.27■□□□□ 0.19
NID1-201ENST00000264187 FTOQ9C0B1 505 aaKnown RBP eCLIP16.27■□□□□ 0.19
NID1-201ENST00000264187 XPOTO43592 962 aaKnown RBP16.27■□□□□ 0.19
NID1-201ENST00000264187 NR1D1P20393 614 aa16.26■□□□□ 0.19
NID1-201ENST00000264187 ARHGAP27Q6ZUM4 889 aa16.26■□□□□ 0.19
NID1-201ENST00000264187 ACCSQ96QU6 501 aa16.26■□□□□ 0.19
NID1-201ENST00000264187 PARD6BQ9BYG5 372 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms