RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 DNAAF3Q8N9W5 541 aa18.87■□□□□ 0.61
NOTCH3-201ENST00000263388 CDHR1Q96JP9 859 aa18.87■□□□□ 0.61
NOTCH3-201ENST00000263388 HNRNPCL2B2RXH8 293 aa18.87■□□□□ 0.61
NOTCH3-201ENST00000263388 HNRNPCL1O60812 293 aaKnown RBP18.87■□□□□ 0.61
NOTCH3-201ENST00000263388 RPSAP08865 295 aaKnown RBP18.87■□□□□ 0.61
NOTCH3-201ENST00000263388 ACTN1P12814 892 aa18.87■□□□□ 0.61
NOTCH3-201ENST00000263388 CCDC138Q96M89 665 aa18.87■□□□□ 0.61
NOTCH3-201ENST00000263388 THAP9Q9H5L6 903 aa18.87■□□□□ 0.61
NOTCH3-201ENST00000263388 TMED2Q15363 201 aa18.86■□□□□ 0.61
NOTCH3-201ENST00000263388 ATG16L1Q676U5 607 aa18.86■□□□□ 0.61
NOTCH3-201ENST00000263388 EEF1DP29692 281 aaKnown RBP18.86■□□□□ 0.61
NOTCH3-201ENST00000263388 ALCAMQ13740 583 aa18.86■□□□□ 0.61
NOTCH3-201ENST00000263388 MIS18BP1Q6P0N0 1132 aa18.86■□□□□ 0.61
NOTCH3-201ENST00000263388 CEP152O94986 1710 aa18.86■□□□□ 0.61
NOTCH3-201ENST00000263388 ZNF449Q6P9G9 518 aa18.86■□□□□ 0.61
NOTCH3-201ENST00000263388 TRIM15Q9C019 465 aa18.86■□□□□ 0.61
NOTCH3-201ENST00000263388 OSBPL3Q9H4L5 887 aa18.86■□□□□ 0.61
NOTCH3-201ENST00000263388 MMP1P03956 469 aa18.86■□□□□ 0.61
NOTCH3-201ENST00000263388 C2orf54Q08AI8 447 aa18.86■□□□□ 0.61
NOTCH3-201ENST00000263388 TMED1Q13445 227 aa18.86■□□□□ 0.61
NOTCH3-201ENST00000263388 THRAP3Q9Y2W1 955 aaKnown RBP18.86■□□□□ 0.61
NOTCH3-201ENST00000263388 FAM170AA1A519 330 aa18.86■□□□□ 0.61
NOTCH3-201ENST00000263388 LMNAP02545 664 aaKnown RBP18.86■□□□□ 0.61
NOTCH3-201ENST00000263388 CYP4A11Q02928 519 aa18.86■□□□□ 0.61
NOTCH3-201ENST00000263388 APOA5Q6Q788 366 aa18.86■□□□□ 0.61
NOTCH3-201ENST00000263388 PARVGQ9HBI0 331 aa18.86■□□□□ 0.61
NOTCH3-201ENST00000263388 SLC38A10Q9HBR0 1119 aa18.86■□□□□ 0.61
NOTCH3-201ENST00000263388 PLTPP55058 493 aa18.86■□□□□ 0.61
NOTCH3-201ENST00000263388 KLHL29Q96CT2 875 aa18.86■□□□□ 0.61
NOTCH3-201ENST00000263388 MAN1B1Q9UKM7 699 aa18.86■□□□□ 0.61
NOTCH3-201ENST00000263388 ZNF804BA4D1E1 1349 aa18.86■□□□□ 0.61
NOTCH3-201ENST00000263388 MAP3K15Q6ZN16 1313 aa18.86■□□□□ 0.61
NOTCH3-201ENST00000263388 NR1D1P20393 614 aa18.86■□□□□ 0.61
NOTCH3-201ENST00000263388 FLAD1Q8NFF5 587 aa18.86■□□□□ 0.61
NOTCH3-201ENST00000263388 EEF2KMTQ96G04 330 aa18.86■□□□□ 0.61
NOTCH3-201ENST00000263388 DCTN3O75935 186 aa18.85■□□□□ 0.61
NOTCH3-201ENST00000263388 CXCR5P32302 372 aa18.85■□□□□ 0.61
NOTCH3-201ENST00000263388 ZMYND12Q9H0C1 365 aa18.85■□□□□ 0.61
NOTCH3-201ENST00000263388 BTDP43251 543 aa18.85■□□□□ 0.61
NOTCH3-201ENST00000263388 FAM47CQ5HY64 1035 aa18.85■□□□□ 0.61
NOTCH3-201ENST00000263388 ZKSCAN8Q15776 578 aaPredicted RBP18.85■□□□□ 0.61
NOTCH3-201ENST00000263388 HECW2Q9P2P5 1572 aa18.85■□□□□ 0.61
NOTCH3-201ENST00000263388 PYGLP06737 847 aa18.85■□□□□ 0.61
NOTCH3-201ENST00000263388 BZW1Q7L1Q6 419 aaKnown RBP18.85■□□□□ 0.61
NOTCH3-201ENST00000263388 PAGR1Q9BTK6 254 aa18.85■□□□□ 0.61
NOTCH3-201ENST00000263388 COPRSQ9NQ92 184 aa18.85■□□□□ 0.61
NOTCH3-201ENST00000263388 CPSF3Q9UKF6 684 aaKnown RBP18.85■□□□□ 0.61
NOTCH3-201ENST00000263388 TLK1Q9UKI8 766 aa18.85■□□□□ 0.61
NOTCH3-201ENST00000263388 F8W8V4 182 aa18.85■□□□□ 0.61
NOTCH3-201ENST00000263388 MYO1EQ12965 1108 aa18.85■□□□□ 0.61
NOTCH3-201ENST00000263388 CEP19Q96LK0 163 aa18.85■□□□□ 0.61
NOTCH3-201ENST00000263388 SNX25Q9H3E2 840 aa18.85■□□□□ 0.61
NOTCH3-201ENST00000263388 UHMK1Q8TAS1 419 aaKnown RBP18.85■□□□□ 0.61
NOTCH3-201ENST00000263388 BEGAINQ9BUH8 593 aa18.85■□□□□ 0.61
NOTCH3-201ENST00000263388 KMT5AQ9NQR1 393 aa18.85■□□□□ 0.61
NOTCH3-201ENST00000263388 NRBP1Q9UHY1 535 aa18.85■□□□□ 0.61
NOTCH3-201ENST00000263388 EFCAB6Q5THR3 1501 aa18.85■□□□□ 0.61
NOTCH3-201ENST00000263388 DNAJC24Q6P3W2 148 aa18.85■□□□□ 0.61
NOTCH3-201ENST00000263388 MID2Q9UJV3 735 aa18.85■□□□□ 0.61
NOTCH3-201ENST00000263388 ARHGEF37A1IGU5 675 aa18.84■□□□□ 0.61
NOTCH3-201ENST00000263388 SLFN13Q68D06 897 aa18.84■□□□□ 0.61
NOTCH3-201ENST00000263388 CYP4F22Q6NT55 531 aa18.84■□□□□ 0.61
NOTCH3-201ENST00000263388 RNF169Q8NCN4 708 aa18.84■□□□□ 0.61
NOTCH3-201ENST00000263388 KIFC3Q9BVG8 833 aa18.84■□□□□ 0.61
NOTCH3-201ENST00000263388 GPR108Q9NPR9 543 aa18.84■□□□□ 0.61
NOTCH3-201ENST00000263388 PODXLO00592 558 aa18.84■□□□□ 0.61
NOTCH3-201ENST00000263388 GADL1Q6ZQY3 521 aa18.84■□□□□ 0.61
NOTCH3-201ENST00000263388 ATP8B3O60423 1300 aa18.84■□□□□ 0.61
NOTCH3-201ENST00000263388 XDHP47989 1333 aa18.84■□□□□ 0.61
NOTCH3-201ENST00000263388 SYNGAP1Q96PV0 1343 aa18.84■□□□□ 0.61
NOTCH3-201ENST00000263388 DHX9Q08211 1270 aaKnown RBP18.84■□□□□ 0.61
NOTCH3-201ENST00000263388 IFRD2Q12894 506 aaPredicted RBP18.84■□□□□ 0.61
NOTCH3-201ENST00000263388 EMBQ6PCB8 327 aa18.84■□□□□ 0.61
NOTCH3-201ENST00000263388 DEPDC1BQ8WUY9 529 aa18.84■□□□□ 0.61
NOTCH3-201ENST00000263388 GSTA4O15217 222 aa18.84■□□□□ 0.61
NOTCH3-201ENST00000263388 NDUFA10O95299 355 aa18.84■□□□□ 0.61
NOTCH3-201ENST00000263388 DR1Q01658 176 aa18.84■□□□□ 0.61
NOTCH3-201ENST00000263388 ADD3Q9UEY8 706 aaKnown RBP18.84■□□□□ 0.61
NOTCH3-201ENST00000263388 IQANK1A0A1B0GTG1 560 aa18.84■□□□□ 0.61
NOTCH3-201ENST00000263388 CDC37Q16543 378 aaPredicted RBP18.84■□□□□ 0.61
NOTCH3-201ENST00000263388 POLR3CQ9BUI4 534 aaPredicted RBP18.84■□□□□ 0.61
NOTCH3-201ENST00000263388 AKT3Q9Y243 479 aa18.84■□□□□ 0.61
NOTCH3-201ENST00000263388 A0A087WUV0 522 aaPredicted RBP18.84■□□□□ 0.61
NOTCH3-201ENST00000263388 CHRNDQ07001 517 aa18.84■□□□□ 0.61
NOTCH3-201ENST00000263388 ATP6V1E2Q96A05 226 aa18.84■□□□□ 0.61
NOTCH3-201ENST00000263388 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.84■□□□□ 0.61
NOTCH3-201ENST00000263388 RSRC2Q7L4I2 434 aaKnown RBP18.83■□□□□ 0.61
NOTCH3-201ENST00000263388 PCGF5Q86SE9 256 aa18.83■□□□□ 0.61
NOTCH3-201ENST00000263388 PCDHA13Q9Y5I0 950 aa18.83■□□□□ 0.61
NOTCH3-201ENST00000263388 KIF20BQ96Q89 1820 aa18.83■□□□□ 0.61
NOTCH3-201ENST00000263388 KRT10P13645 584 aa18.83■□□□□ 0.61
NOTCH3-201ENST00000263388 EEF1B2P24534 225 aaKnown RBP18.83■□□□□ 0.61
NOTCH3-201ENST00000263388 PYCARDQ9ULZ3 195 aa18.83■□□□□ 0.61
NOTCH3-201ENST00000263388 SYNJ2BP-COX16A0A087WUM0 186 aa18.83■□□□□ 0.61
NOTCH3-201ENST00000263388 GOLGA8HP0CJ92 632 aa18.83■□□□□ 0.61
NOTCH3-201ENST00000263388 FAM98CQ17RN3 349 aaKnown RBP18.83■□□□□ 0.61
NOTCH3-201ENST00000263388 KRT80Q6KB66 452 aa18.83■□□□□ 0.61
NOTCH3-201ENST00000263388 NEK9Q8TD19 979 aa18.83■□□□□ 0.61
NOTCH3-201ENST00000263388 UPF3AQ9H1J1 476 aaKnown RBP18.83■□□□□ 0.61
NOTCH3-201ENST00000263388 COX16Q9P0S2 106 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms