RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 CCDC195A0A1B0GUA6 201 aa13.06□□□□□ -0.32
SMG6-201ENST00000263073 MT-ND3P03897 115 aa13.06□□□□□ -0.32
SMG6-201ENST00000263073 ESRRAP11474 423 aaPredicted RBP13.06□□□□□ -0.32
SMG6-201ENST00000263073 STMN1P16949 149 aa13.06□□□□□ -0.32
SMG6-201ENST00000263073 MFAP3P55082 362 aa13.06□□□□□ -0.32
SMG6-201ENST00000263073 PWP2Q15269 919 aaKnown RBP13.06□□□□□ -0.32
SMG6-201ENST00000263073 TEKT3Q9BXF9 490 aa13.06□□□□□ -0.32
SMG6-201ENST00000263073 DKC1O60832 514 aaKnown RBP eCLIP13.06□□□□□ -0.323e-6■■■■■ 27.9
SMG6-201ENST00000263073 CPP00450 1065 aa13.06□□□□□ -0.32
SMG6-201ENST00000263073 TMEM191BP0C7N4 346 aa13.06□□□□□ -0.32
SMG6-201ENST00000263073 SLFN14P0C7P3 912 aa13.06□□□□□ -0.32
SMG6-201ENST00000263073 CD58P19256 250 aa13.06□□□□□ -0.32
SMG6-201ENST00000263073 INPP1P49441 399 aa13.06□□□□□ -0.32
SMG6-201ENST00000263073 OSTNP61366 133 aa13.06□□□□□ -0.32
SMG6-201ENST00000263073 NFRKBQ6P4R8 1299 aa13.06□□□□□ -0.32
SMG6-201ENST00000263073 NEK9Q8TD19 979 aa13.06□□□□□ -0.32
SMG6-201ENST00000263073 SDCCAG3Q96C92 435 aa13.06□□□□□ -0.32
SMG6-201ENST00000263073 DYNLL2Q96FJ2 89 aa13.06□□□□□ -0.32
SMG6-201ENST00000263073 CALN1Q9BXU9 219 aa13.06□□□□□ -0.32
SMG6-201ENST00000263073 PTK2Q05397 1052 aa13.06□□□□□ -0.32
SMG6-201ENST00000263073 RINT1Q6NUQ1 792 aa13.06□□□□□ -0.32
SMG6-201ENST00000263073 ANKRD35Q8N283 1001 aa13.06□□□□□ -0.32
SMG6-201ENST00000263073 DHTKD1Q96HY7 919 aaPredicted RBP13.06□□□□□ -0.32
SMG6-201ENST00000263073 HNRNPDLO14979 420 aaKnown RBP13.05□□□□□ -0.32
SMG6-201ENST00000263073 RNF8O76064 485 aa13.05□□□□□ -0.32
SMG6-201ENST00000263073 TTC4O95801 387 aa13.05□□□□□ -0.32
SMG6-201ENST00000263073 POLGP54098 1239 aaPredicted RBP13.05□□□□□ -0.32
SMG6-201ENST00000263073 BBS9Q3SYG4 887 aa13.05□□□□□ -0.32
SMG6-201ENST00000263073 ZBTB41Q5SVQ8 909 aa13.05□□□□□ -0.32
SMG6-201ENST00000263073 MMS22LQ6ZRQ5 1243 aa13.05□□□□□ -0.32
SMG6-201ENST00000263073 RUNDC3BQ96NL0 473 aa13.05□□□□□ -0.32
SMG6-201ENST00000263073 TXLNGQ9NUQ3 528 aa13.05□□□□□ -0.32
SMG6-201ENST00000263073 ZSWIM5Q9P217 1185 aa13.05□□□□□ -0.32
SMG6-201ENST00000263073 SEPT9Q9UHD8 586 aaPredicted RBP13.05□□□□□ -0.32
SMG6-201ENST00000263073 A6NJR5 290 aa13.05□□□□□ -0.32
SMG6-201ENST00000263073 P4HA1P13674 534 aa13.05□□□□□ -0.32
SMG6-201ENST00000263073 PSMC2P35998 433 aaKnown RBP13.05□□□□□ -0.32
SMG6-201ENST00000263073 MAGOHP61326 146 aaKnown RBP13.05□□□□□ -0.32
SMG6-201ENST00000263073 DARS2Q6PI48 645 aaKnown RBP13.05□□□□□ -0.32
SMG6-201ENST00000263073 TRMT2AQ8IZ69 625 aaKnown RBP13.05□□□□□ -0.32
SMG6-201ENST00000263073 ENOX1Q8TC92 643 aaKnown RBP13.05□□□□□ -0.32
SMG6-201ENST00000263073 TTC17Q96AE7 1141 aa13.05□□□□□ -0.32
SMG6-201ENST00000263073 CA4P22748 312 aa13.05□□□□□ -0.32
SMG6-201ENST00000263073 GARSP41250 739 aaKnown RBP13.05□□□□□ -0.32
SMG6-201ENST00000263073 HABP4Q5JVS0 413 aaKnown RBP13.05□□□□□ -0.32
SMG6-201ENST00000263073 USP17L2Q6R6M4 530 aa13.05□□□□□ -0.32
SMG6-201ENST00000263073 SCARA5Q6ZMJ2 495 aa13.05□□□□□ -0.32
SMG6-201ENST00000263073 LARGE2Q8N3Y3 721 aa13.05□□□□□ -0.32
SMG6-201ENST00000263073 PANX2Q96RD6 677 aa13.05□□□□□ -0.32
SMG6-201ENST00000263073 HEMGNQ9BXL5 484 aa13.05□□□□□ -0.32
SMG6-201ENST00000263073 ZWILCHQ9H900 591 aa13.05□□□□□ -0.32
SMG6-201ENST00000263073 KRT82Q9NSB4 513 aa13.05□□□□□ -0.32
SMG6-201ENST00000263073 CFAP65Q6ZU64 1925 aaKnown RBP13.05□□□□□ -0.32
SMG6-201ENST00000263073 RPS8P62241 208 aaKnown RBP13.05□□□□□ -0.32
SMG6-201ENST00000263073 FAM98CQ17RN3 349 aaKnown RBP13.05□□□□□ -0.32
SMG6-201ENST00000263073 CERKLQ49MI3 558 aaPredicted RBP13.05□□□□□ -0.32
SMG6-201ENST00000263073 ALS2CLQ60I27 953 aa13.05□□□□□ -0.32
SMG6-201ENST00000263073 SEC31BQ9NQW1 1179 aa13.05□□□□□ -0.32
SMG6-201ENST00000263073 PLEKHA8P1O95397 391 aa13.04□□□□□ -0.32
SMG6-201ENST00000263073 ZNF211Q13398 564 aaPredicted RBP13.04□□□□□ -0.32
SMG6-201ENST00000263073 BBOF1Q8ND07 529 aa13.04□□□□□ -0.32
SMG6-201ENST00000263073 NT5C1BQ96P26 610 aa13.04□□□□□ -0.32
SMG6-201ENST00000263073 ACTR5Q9H9F9 607 aaPredicted RBP13.04□□□□□ -0.32
SMG6-201ENST00000263073 DNMT1P26358 1616 aaKnown RBP13.04□□□□□ -0.32
SMG6-201ENST00000263073 ARHGEF10O15013 1369 aa13.04□□□□□ -0.32
SMG6-201ENST00000263073 SH2B2O14492 632 aaPredicted RBP13.04□□□□□ -0.32
SMG6-201ENST00000263073 N4BP1O75113 896 aaKnown RBP13.04□□□□□ -0.32
SMG6-201ENST00000263073 ANKRD20A4Q4UJ75 823 aa13.04□□□□□ -0.32
SMG6-201ENST00000263073 ANKRD20A8PQ5CZ79 823 aa13.04□□□□□ -0.32
SMG6-201ENST00000263073 ANKRD20A2Q5SQ80 823 aa13.04□□□□□ -0.32
SMG6-201ENST00000263073 ANKRD20A1Q5TYW2 823 aa13.04□□□□□ -0.32
SMG6-201ENST00000263073 ZBTB33Q86T24 672 aa13.04□□□□□ -0.32
SMG6-201ENST00000263073 CDKL2Q92772 493 aa13.04□□□□□ -0.32
SMG6-201ENST00000263073 TRIM66O15016 1216 aa13.04□□□□□ -0.32
SMG6-201ENST00000263073 SERPING1P05155 500 aa13.04□□□□□ -0.32
SMG6-201ENST00000263073 EXT2Q93063 718 aa13.04□□□□□ -0.32
SMG6-201ENST00000263073 NPC1L1Q9UHC9 1359 aa13.04□□□□□ -0.32
SMG6-201ENST00000263073 MTF1Q14872 753 aa13.04□□□□□ -0.32
SMG6-201ENST00000263073 KRT80Q6KB66 452 aa13.04□□□□□ -0.32
SMG6-201ENST00000263073 RSBN1LQ6PCB5 846 aaPredicted RBP13.04□□□□□ -0.32
SMG6-201ENST00000263073 RYBPQ8N488 228 aaPredicted RBP13.04□□□□□ -0.32
SMG6-201ENST00000263073 SPZ1Q9BXG8 430 aa13.04□□□□□ -0.32
SMG6-201ENST00000263073 ADAM33Q9BZ11 813 aa13.04□□□□□ -0.32
SMG6-201ENST00000263073 BAG5Q9UL15 447 aa13.04□□□□□ -0.32
SMG6-201ENST00000263073 PI4K2BG5E9Z4 385 aa13.04□□□□□ -0.32
SMG6-201ENST00000263073 HMGB2P26583 209 aaKnown RBP13.04□□□□□ -0.32
SMG6-201ENST00000263073 GNPTABQ3T906 1256 aa13.04□□□□□ -0.32
SMG6-201ENST00000263073 ZBTB38Q8NAP3 1195 aaPredicted RBP13.04□□□□□ -0.32
SMG6-201ENST00000263073 PITPNM3Q9BZ71 974 aa13.04□□□□□ -0.32
SMG6-201ENST00000263073 NDST4Q9H3R1 872 aa13.04□□□□□ -0.32
SMG6-201ENST00000263073 ZBED6P86452 979 aa13.03□□□□□ -0.32
SMG6-201ENST00000263073 SLFN13Q68D06 897 aa13.03□□□□□ -0.32
SMG6-201ENST00000263073 NOP9Q86U38 636 aaKnown RBP13.03□□□□□ -0.32
SMG6-201ENST00000263073 KCTD6Q8NC69 237 aa13.03□□□□□ -0.32
SMG6-201ENST00000263073 HSPH1Q92598 858 aa13.03□□□□□ -0.32
SMG6-201ENST00000263073 CHMP6Q96FZ7 201 aa13.03□□□□□ -0.32
SMG6-201ENST00000263073 CCDC138Q96M89 665 aa13.03□□□□□ -0.32
SMG6-201ENST00000263073 ABHD10Q9NUJ1 306 aa13.03□□□□□ -0.32
SMG6-201ENST00000263073 DCTN4Q9UJW0 460 aa13.03□□□□□ -0.32
SMG6-201ENST00000263073 ZBTB12Q9Y330 459 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms