RNA–Protein interactions for RNA: ENST00000262426.5

FOXF1-201, Transcript of forkhead box F1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXF1, Length 3,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1-201ENST00000262426 HMGCS2P54868 508 aa16.1■□□□□ 0.17
FOXF1-201ENST00000262426 CNKSR2Q8WXI2 1034 aa16.1■□□□□ 0.17
FOXF1-201ENST00000262426 PDE11AQ9HCR9 933 aa16.1■□□□□ 0.17
FOXF1-201ENST00000262426 RGL1Q9NZL6 768 aa16.1■□□□□ 0.17
FOXF1-201ENST00000262426 RNF181Q9P0P0 153 aa16.1■□□□□ 0.17
FOXF1-201ENST00000262426 LENG9Q96B70 501 aa16.1■□□□□ 0.17
FOXF1-201ENST00000262426 EMILIN3Q9NT22 766 aa16.1■□□□□ 0.17
FOXF1-201ENST00000262426 GPRC5DQ9NZD1 345 aa16.1■□□□□ 0.17
FOXF1-201ENST00000262426 BRCA1P38398 1863 aaKnown RBP16.1■□□□□ 0.17
FOXF1-201ENST00000262426 MSH4O15457 936 aa16.09■□□□□ 0.17
FOXF1-201ENST00000262426 ERCC5P28715 1186 aaPredicted RBP16.09■□□□□ 0.17
FOXF1-201ENST00000262426 DDX12PQ92771 950 aa16.09■□□□□ 0.17
FOXF1-201ENST00000262426 CCDC102AQ96A19 550 aa16.09■□□□□ 0.17
FOXF1-201ENST00000262426 EXOC1Q9NV70 894 aa16.09■□□□□ 0.17
FOXF1-201ENST00000262426 PPARDQ03181 441 aa16.09■□□□□ 0.17
FOXF1-201ENST00000262426 MUM1L1Q5H9M0 696 aa16.09■□□□□ 0.17
FOXF1-201ENST00000262426 GPIHBP1Q8IV16 184 aa16.09■□□□□ 0.17
FOXF1-201ENST00000262426 COL20A1Q9P218 1284 aa16.09■□□□□ 0.17
FOXF1-201ENST00000262426 POLR2AP24928 1970 aaKnown RBP16.09■□□□□ 0.17
FOXF1-201ENST00000262426 VCAM1P19320 739 aa16.08■□□□□ 0.17
FOXF1-201ENST00000262426 SFPQP23246 707 aaKnown RBP eCLIP16.08■□□□□ 0.17
FOXF1-201ENST00000262426 MNAT1P51948 309 aa16.08■□□□□ 0.17
FOXF1-201ENST00000262426 WDR18Q9BV38 432 aa16.08■□□□□ 0.17
FOXF1-201ENST00000262426 FGFBP2Q9BYJ0 223 aa16.08■□□□□ 0.17
FOXF1-201ENST00000262426 RAB34Q9BZG1 259 aa16.08■□□□□ 0.17
FOXF1-201ENST00000262426 RPAP3Q9H6T3 665 aaPredicted RBP16.08■□□□□ 0.17
FOXF1-201ENST00000262426 ABCB11O95342 1321 aa16.08■□□□□ 0.17
FOXF1-201ENST00000262426 GCOM1H8Y6P7 765 aaPredicted RBP16.08■□□□□ 0.16
FOXF1-201ENST00000262426 POLR2MP0CAP2 368 aa16.08■□□□□ 0.16
FOXF1-201ENST00000262426 RANBP17Q9H2T7 1088 aaKnown RBP16.08■□□□□ 0.16
FOXF1-201ENST00000262426 PUF60Q9UHX1 559 aaKnown RBP16.08■□□□□ 0.16
FOXF1-201ENST00000262426 EML1O00423 815 aa16.08■□□□□ 0.16
FOXF1-201ENST00000262426 YBX3P16989 372 aaKnown RBP eCLIP16.08■□□□□ 0.16
FOXF1-201ENST00000262426 PABPC4Q13310 644 aaKnown RBP eCLIP16.08■□□□□ 0.16
FOXF1-201ENST00000262426 MOB2Q70IA6 237 aa16.08■□□□□ 0.16
FOXF1-201ENST00000262426 VSTM4Q8IW00 320 aa16.08■□□□□ 0.16
FOXF1-201ENST00000262426 KIAA0895Q8NCT3 520 aa16.08■□□□□ 0.16
FOXF1-201ENST00000262426 TRIM47Q96LD4 638 aa16.08■□□□□ 0.16
FOXF1-201ENST00000262426 KCNMB3Q9NPA1 279 aa16.08■□□□□ 0.16
FOXF1-201ENST00000262426 ZNF536O15090 1300 aa16.08■□□□□ 0.16
FOXF1-201ENST00000262426 ZRANB2O95218 330 aaKnown RBP eCLIP16.07■□□□□ 0.16
FOXF1-201ENST00000262426 TFRCP02786 760 aaKnown RBP16.07■□□□□ 0.16
FOXF1-201ENST00000262426 LMNB1P20700 586 aa16.07■□□□□ 0.16
FOXF1-201ENST00000262426 USP11P51784 963 aa16.07■□□□□ 0.16
FOXF1-201ENST00000262426 APTXQ7Z2E3 356 aaKnown RBP16.07■□□□□ 0.16
FOXF1-201ENST00000262426 ADSSL1Q8N142 457 aa16.07■□□□□ 0.16
FOXF1-201ENST00000262426 IL31RAQ8NI17 732 aa16.07■□□□□ 0.16
FOXF1-201ENST00000262426 GOLGA5Q8TBA6 731 aa16.07■□□□□ 0.16
FOXF1-201ENST00000262426 SH2D3AQ9BRG2 576 aa16.07■□□□□ 0.16
FOXF1-201ENST00000262426 PYM1Q9BRP8 204 aaKnown RBP16.07■□□□□ 0.16
FOXF1-201ENST00000262426 RIPK3Q9Y572 518 aa16.07■□□□□ 0.16
FOXF1-201ENST00000262426 COL2A1P02458 1487 aaPredicted RBP16.07■□□□□ 0.16
FOXF1-201ENST00000262426 ADM5C9JUS6 153 aa16.07■□□□□ 0.16
FOXF1-201ENST00000262426 LIG3P49916 1009 aa16.07■□□□□ 0.16
FOXF1-201ENST00000262426 MAP3K10Q02779 954 aa16.07■□□□□ 0.16
FOXF1-201ENST00000262426 CATSPER3Q86XQ3 398 aa16.07■□□□□ 0.16
FOXF1-201ENST00000262426 ETNPPLQ8TBG4 499 aa16.07■□□□□ 0.16
FOXF1-201ENST00000262426 PIGOQ8TEQ8 1089 aa16.07■□□□□ 0.16
FOXF1-201ENST00000262426 CRYGNQ8WXF5 182 aa16.07■□□□□ 0.16
FOXF1-201ENST00000262426 RAD54LQ92698 747 aa16.07■□□□□ 0.16
FOXF1-201ENST00000262426 ATG4CQ96DT6 458 aa16.07■□□□□ 0.16
FOXF1-201ENST00000262426 GDAP1L1Q96MZ0 367 aa16.07■□□□□ 0.16
FOXF1-201ENST00000262426 SYT17Q9BSW7 474 aa16.07■□□□□ 0.16
FOXF1-201ENST00000262426 SORBS3O60504 671 aa16.07■□□□□ 0.16
FOXF1-201ENST00000262426 CTNND1O60716 968 aaKnown RBP16.07■□□□□ 0.16
FOXF1-201ENST00000262426 ARP10275 920 aa16.07■□□□□ 0.16
FOXF1-201ENST00000262426 ACTN2P35609 894 aa16.07■□□□□ 0.16
FOXF1-201ENST00000262426 SREBF1P36956 1147 aa16.07■□□□□ 0.16
FOXF1-201ENST00000262426 FAM193AP78312 1265 aa16.07■□□□□ 0.16
FOXF1-201ENST00000262426 CTTNQ14247 550 aaKnown RBP16.07■□□□□ 0.16
FOXF1-201ENST00000262426 PDIA5Q14554 519 aa16.07■□□□□ 0.16
FOXF1-201ENST00000262426 KRT31Q15323 416 aa16.07■□□□□ 0.16
FOXF1-201ENST00000262426 CC2D1AQ6P1N0 951 aaPredicted RBP16.07■□□□□ 0.16
FOXF1-201ENST00000262426 SH2D4AQ9H788 454 aa16.07■□□□□ 0.16
FOXF1-201ENST00000262426 RMND1Q9NWS8 449 aa16.07■□□□□ 0.16
FOXF1-201ENST00000262426 FEM1BQ9UK73 627 aa16.07■□□□□ 0.16
FOXF1-201ENST00000262426 AP3B2Q13367 1082 aa16.06■□□□□ 0.16
FOXF1-201ENST00000262426 ANKRD40Q6AI12 368 aa16.06■□□□□ 0.16
FOXF1-201ENST00000262426 NSMFQ6X4W1 530 aa16.06■□□□□ 0.16
FOXF1-201ENST00000262426 SLF1Q9BQI6 1058 aa16.06■□□□□ 0.16
FOXF1-201ENST00000262426 YY1AP1Q9H869 796 aa16.06■□□□□ 0.16
FOXF1-201ENST00000262426 ARFGAP3Q9NP61 516 aa16.06■□□□□ 0.16
FOXF1-201ENST00000262426 FAN1Q9Y2M0 1017 aa16.06■□□□□ 0.16
FOXF1-201ENST00000262426 SFI1A8K8P3 1242 aa16.06■□□□□ 0.16
FOXF1-201ENST00000262426 N4BP3O15049 544 aa16.06■□□□□ 0.16
FOXF1-201ENST00000262426 RHOBTB3O94955 611 aa16.06■□□□□ 0.16
FOXF1-201ENST00000262426 IRF2BP1Q8IU81 584 aa16.06■□□□□ 0.16
FOXF1-201ENST00000262426 PRPF38AQ8NAV1 312 aaKnown RBP16.06■□□□□ 0.16
FOXF1-201ENST00000262426 CLGNO14967 610 aa16.06■□□□□ 0.16
FOXF1-201ENST00000262426 CBFA2T2O43439 604 aa16.06■□□□□ 0.16
FOXF1-201ENST00000262426 GCFC2P16383 781 aaKnown RBP16.06■□□□□ 0.16
FOXF1-201ENST00000262426 GIMAP8Q8ND71 665 aaPredicted RBP16.06■□□□□ 0.16
FOXF1-201ENST00000262426 FANCGO15287 622 aa16.05■□□□□ 0.16
FOXF1-201ENST00000262426 PTPRAP18433 802 aa16.05■□□□□ 0.16
FOXF1-201ENST00000262426 EIF2AK2P19525 551 aaKnown RBP16.05■□□□□ 0.16
FOXF1-201ENST00000262426 NR1I3Q14994 352 aa16.05■□□□□ 0.16
FOXF1-201ENST00000262426 NELFCDQ8IXH7 590 aa16.05■□□□□ 0.16
FOXF1-201ENST00000262426 HINFPQ9BQA5 517 aa16.05■□□□□ 0.16
FOXF1-201ENST00000262426 CXorf56Q9H5V9 222 aa16.05■□□□□ 0.16
FOXF1-201ENST00000262426 PICK1Q9NRD5 415 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms